Miyakogusa Predicted Gene
- chr4.CM0126.460.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr4.CM0126.460.nd - phase: 0 /partial
(223 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC161034_17.5 Thioredoxin domain 2; Thioredoxin fold chr04_... 234 2e-62
IMGA|CT573076_9.5 Heat shock chaperonin-binding; Tetratricopepti... 66 1e-11
IMGA|AC174277_61.4 Amidase chr04_pseudomolecule_IMGAG_V2 3911924... 57 7e-09
IMGA|CT025844_7.4 CS; SGS chr05_pseudomolecule_IMGAG_V2 2280324-... 54 5e-08
IMGA|AC139354_12.4 TPR repeat chr01_pseudomolecule_IMGAG_V2 9134... 49 1e-06
IMGA|AC146561_47.4 Tetratricopeptide-like helical chr05_pseudomo... 49 1e-06
IMGA|AC137552_37.4 Peptidylprolyl isomerase, FKBP-type chr04_pse... 47 4e-06
IMGA|AC175047_5.4 Heat shock protein DnaJ, N-terminal chr07_pseu... 46 1e-05
IMGA|AC166314_13.4 Thioredoxin domain 2; Thioredoxin fold chr05_... 42 2e-04
>IMGA|AC161034_17.5 Thioredoxin domain 2; Thioredoxin fold
chr04_pseudomolecule_IMGAG_V2 39225432-39222043 F
EGN_Mt071002 20080227
Length = 364
Score = 234 bits (597), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/223 (51%), Positives = 152/223 (68%), Gaps = 19/223 (8%)
Query: 1 MDATKLKELKHFIEQCQSNPSTLADPSLSFFRDYLESLGAKLPSSAYSDSKHEESDDDIE 60
MD K+ ELK FIE C+SNPS L PSL FF+ YL SLGA++P ++
Sbjct: 1 MDIGKVSELKEFIESCKSNPSLLHTPSLQFFKSYLLSLGARIPPQPKTEP---------- 50
Query: 61 DLHXXXXXXXXXXXXXXXXXXXXXXXGEIVEPDDDPPQKMGDPSVEVTEESREASQLAKA 120
++V+PD+DPP KMGDPS +VT++ R+A+QL+K+
Sbjct: 51 ---------VVDDDDIIESDIEFDNTDDVVQPDNDPPHKMGDPSAQVTDDQRDAAQLSKS 101
Query: 121 KAMEAISEGNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEINP 180
KA++AIS+GN ++A++ LT AI LNP S+I+Y RASV+IK+KKPNAAIRD++ AL+INP
Sbjct: 102 KAIDAISQGNFDQALDLLTQAILLNPHSSILYATRASVFIKLKKPNAAIRDSDTALKINP 161
Query: 181 DSAKGYKTRGMARALLGQWEEAAKDLHVASKLDYDEEISAVLK 223
DSAKGYK RG++RA+LG W EA DLHVASK+DYDEEI+ LK
Sbjct: 162 DSAKGYKIRGLSRAMLGLWTEALTDLHVASKIDYDEEIAMALK 204
>IMGA|CT573076_9.5 Heat shock chaperonin-binding;
Tetratricopeptide-like helical
chr05_pseudomolecule_IMGAG_V2 3344182-3339743 E
EGN_Mt071002 20080227
Length = 581
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%)
Query: 118 AKAKAMEAISEGNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALE 177
AKAK A S G+ AI ++AI L+PT+ ++Y NR++ Y ++ A+ DA +E
Sbjct: 5 AKAKGNAAFSSGDFSTAIRHFSEAIDLSPTNHVLYSNRSAAYASLQNYTDALTDAKKTVE 64
Query: 178 INPDSAKGYKTRGMARALLGQWEEA 202
+ PD +KGY G A L Q+++A
Sbjct: 65 LKPDWSKGYSRLGAAHLGLSQYDDA 89
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 119 KAKAMEAISEGNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEI 178
+ K E + EAI+ T++I NP + Y NRA+ Y K+ ++DA +E+
Sbjct: 396 REKGNEYFKQQKYPEAIKHYTESIKRNPQNPKAYSNRAACYTKLGAMPEGLKDAEKCIEL 455
Query: 179 NPDSAKGYKTRGMARALLGQWEEA 202
+P KGY +G + + ++E+A
Sbjct: 456 DPTFTKGYTRKGAVQFFMKEYEKA 479
>IMGA|AC174277_61.4 Amidase chr04_pseudomolecule_IMGAG_V2
39119246-39125898 F EGN_Mt071002 20080227
Length = 591
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%)
Query: 113 EASQLAKAKAMEAISEGNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDA 172
+++++AK K +A + ++AI T+AI L +A Y NRA Y+++ A D
Sbjct: 474 QSAEIAKEKGNQAYKDKQWQKAIGFYTEAIKLCGNNATYYSNRAQAYLELGSYLQAEADC 533
Query: 173 NAALEINPDSAKGYKTRGMARALLGQWEEAAKDLHVASKLD 213
A+ ++ S K Y RG AR +LG ++EA D A L+
Sbjct: 534 TKAISLDKKSVKAYFRRGTAREMLGYYKEAIDDFKYALVLE 574
>IMGA|CT025844_7.4 CS; SGS chr05_pseudomolecule_IMGAG_V2
2280324-2275934 E EGN_Mt071002 20080227
Length = 374
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 121 KAMEAISEGNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEINP 180
KA EA + + A++ + AI ++PT+A ++ +RA +IK+ A+ DAN A+++NP
Sbjct: 8 KAKEAFFDDDFTLAVDFYSQAIEIDPTNANLFADRAQSHIKLNAFTEAVSDANKAIQLNP 67
Query: 181 DSAKGYKTRGMARALLGQWEEA 202
+ +K Y +G A L ++ A
Sbjct: 68 NLSKAYLRKGTACINLEEYHTA 89
>IMGA|AC139354_12.4 TPR repeat chr01_pseudomolecule_IMGAG_V2
9134047-9142603 E EGN_Mt071002 20080227
Length = 482
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 133 EAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEINPDSAKGYKTRGMA 192
+AIE AI++ SA+ Y NRA+ Y ++ + AI+D+ ++EI+P+ +K Y G+A
Sbjct: 200 DAIELYNCAIAIYEKSAVYYCNRAAAYTQINRYTEAIQDSLRSIEIDPNYSKAYSRLGLA 259
Query: 193 RALLGQWEEAA-KDLHVASKLDYDEE 217
G + +A K A +LD + E
Sbjct: 260 YYAQGNYRDAIDKGFKKALQLDPNNE 285
>IMGA|AC146561_47.4 Tetratricopeptide-like helical
chr05_pseudomolecule_IMGAG_V2 5625070-5629839 E
EGN_Mt071002 20080227
Length = 559
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 129 GNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEINPDSAKGYKT 188
G EAIE LT A+ P +A + R V K K+ N A+ D +A ++++ D+ Y
Sbjct: 357 GEFVEAIEDLTKALEFEPNTADILHERGIVNFKFKEFNTAVEDLSACVQLDRDNKSAYTY 416
Query: 189 RGMARALLGQWEEA 202
G+A + +G++++A
Sbjct: 417 LGLALSSIGEYKKA 430
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 120 AKAMEAISEGNLEEAIESLTDAI----SLNPTSAIMYGNRASVYIKMKKPNAAIRDANAA 175
++ + ++EG AI S+ D I S P + I R + Y ++ ++AI D A
Sbjct: 280 SRGIAEVNEGKYAHAI-SIFDQILKEDSAYPEALI---GRGTAYAFKRELHSAIADFTKA 335
Query: 176 LEINPDSAKGYKTRGMARALLGQWEEAAKDL 206
++ NP + + +K RG ARA LG++ EA +DL
Sbjct: 336 IQYNPAAGEAWKRRGQARAALGEFVEAIEDL 366
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%)
Query: 131 LEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEINPDSAKGYKTRG 190
L AI T AI NP + + R + + AI D ALE P++A RG
Sbjct: 325 LHSAIADFTKAIQYNPAAGEAWKRRGQARAALGEFVEAIEDLTKALEFEPNTADILHERG 384
Query: 191 MARALLGQWEEAAKDLHVASKLDYD 215
+ ++ A +DL +LD D
Sbjct: 385 IVNFKFKEFNTAVEDLSACVQLDRD 409
>IMGA|AC137552_37.4 Peptidylprolyl isomerase, FKBP-type
chr04_pseudomolecule_IMGAG_V2 12876349-12888309 E
EGN_Mt071002 20080227
Length = 626
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 116 QLAKAKAMEAISEGNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAA 175
+LAKAK + + E N + I + T +++ N A+ Y+K+ + +I N
Sbjct: 419 ELAKAKYEKVLREFNHVNPQDDEEGKI-FSDTRNLLHLNVAACYLKLGECRKSIETCNKV 477
Query: 176 LEINPDSAKGYKTRGMARALLGQWEEAAKDLHVASKLDYDEE---ISAVLK 223
LE NP KG RGMA G +EEA D + K+D E +A+LK
Sbjct: 478 LEANPAHVKGLYRRGMAYMGNGDFEEARADFKMMIKVDKSTESDATAALLK 528
>IMGA|AC175047_5.4 Heat shock protein DnaJ, N-terminal
chr07_pseudomolecule_IMGAG_V2 25105020-25115509 E
EGN_Mt071002 20080227
Length = 1222
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 129 GNLEEAIESLTDAISLN----PTSAIMYGNRASVYIKMKKPNAAIRDANAALEINPDSAK 184
GN EA+E+ T A+S N P +AI +GNRA+ + + AI D + A+ ++ + AK
Sbjct: 947 GNYSEAVENYTAALSSNIKSRPFAAICFGNRAAAHQASGQIADAIADCSMAMALDENYAK 1006
Query: 185 GYKTRGMARALLGQWEEAAKDL 206
R ++ +E+AA DL
Sbjct: 1007 AISRRATLHEMVRDYEQAACDL 1028
>IMGA|AC166314_13.4 Thioredoxin domain 2; Thioredoxin fold
chr05_pseudomolecule_IMGAG_V2 21150892-21146782 F
EGN_Mt071002 20080227
Length = 676
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 133 EAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEINPDSAKGYKTRGMA 192
EA + + +P ++++ NRA+ K+ + AI D +AAL +NP +K R
Sbjct: 462 EACAVYNEGLDHDPHNSVLLCNRAACRSKLGQYEKAIEDCDAALMLNPCYSKARLRRAYC 521
Query: 193 RALLGQWEEAAKD 205
A L +WE A +D
Sbjct: 522 NAKLERWEVAIQD 534