Miyakogusa Predicted Gene

chr4.CM0126.460.nd
Show Alignment: 

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr4.CM0126.460.nd - phase: 0 /partial
         (223 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC161034_17.5 Thioredoxin domain 2; Thioredoxin fold chr04_...   234   2e-62
IMGA|CT573076_9.5 Heat shock chaperonin-binding; Tetratricopepti...    66   1e-11
IMGA|AC174277_61.4 Amidase chr04_pseudomolecule_IMGAG_V2 3911924...    57   7e-09
IMGA|CT025844_7.4 CS; SGS chr05_pseudomolecule_IMGAG_V2 2280324-...    54   5e-08
IMGA|AC139354_12.4 TPR repeat chr01_pseudomolecule_IMGAG_V2 9134...    49   1e-06
IMGA|AC146561_47.4 Tetratricopeptide-like helical chr05_pseudomo...    49   1e-06
IMGA|AC137552_37.4 Peptidylprolyl isomerase, FKBP-type chr04_pse...    47   4e-06
IMGA|AC175047_5.4 Heat shock protein DnaJ, N-terminal chr07_pseu...    46   1e-05
IMGA|AC166314_13.4 Thioredoxin domain 2; Thioredoxin fold chr05_...    42   2e-04

>IMGA|AC161034_17.5 Thioredoxin domain 2; Thioredoxin fold
           chr04_pseudomolecule_IMGAG_V2 39225432-39222043 F
           EGN_Mt071002 20080227
          Length = 364

 Score =  234 bits (597), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 115/223 (51%), Positives = 152/223 (68%), Gaps = 19/223 (8%)

Query: 1   MDATKLKELKHFIEQCQSNPSTLADPSLSFFRDYLESLGAKLPSSAYSDSKHEESDDDIE 60
           MD  K+ ELK FIE C+SNPS L  PSL FF+ YL SLGA++P    ++           
Sbjct: 1   MDIGKVSELKEFIESCKSNPSLLHTPSLQFFKSYLLSLGARIPPQPKTEP---------- 50

Query: 61  DLHXXXXXXXXXXXXXXXXXXXXXXXGEIVEPDDDPPQKMGDPSVEVTEESREASQLAKA 120
                                      ++V+PD+DPP KMGDPS +VT++ R+A+QL+K+
Sbjct: 51  ---------VVDDDDIIESDIEFDNTDDVVQPDNDPPHKMGDPSAQVTDDQRDAAQLSKS 101

Query: 121 KAMEAISEGNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEINP 180
           KA++AIS+GN ++A++ LT AI LNP S+I+Y  RASV+IK+KKPNAAIRD++ AL+INP
Sbjct: 102 KAIDAISQGNFDQALDLLTQAILLNPHSSILYATRASVFIKLKKPNAAIRDSDTALKINP 161

Query: 181 DSAKGYKTRGMARALLGQWEEAAKDLHVASKLDYDEEISAVLK 223
           DSAKGYK RG++RA+LG W EA  DLHVASK+DYDEEI+  LK
Sbjct: 162 DSAKGYKIRGLSRAMLGLWTEALTDLHVASKIDYDEEIAMALK 204


>IMGA|CT573076_9.5 Heat shock chaperonin-binding;
           Tetratricopeptide-like helical
           chr05_pseudomolecule_IMGAG_V2 3344182-3339743 E
           EGN_Mt071002 20080227
          Length = 581

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 50/85 (58%)

Query: 118 AKAKAMEAISEGNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALE 177
           AKAK   A S G+   AI   ++AI L+PT+ ++Y NR++ Y  ++    A+ DA   +E
Sbjct: 5   AKAKGNAAFSSGDFSTAIRHFSEAIDLSPTNHVLYSNRSAAYASLQNYTDALTDAKKTVE 64

Query: 178 INPDSAKGYKTRGMARALLGQWEEA 202
           + PD +KGY   G A   L Q+++A
Sbjct: 65  LKPDWSKGYSRLGAAHLGLSQYDDA 89



 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 44/84 (52%)

Query: 119 KAKAMEAISEGNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEI 178
           + K  E   +    EAI+  T++I  NP +   Y NRA+ Y K+      ++DA   +E+
Sbjct: 396 REKGNEYFKQQKYPEAIKHYTESIKRNPQNPKAYSNRAACYTKLGAMPEGLKDAEKCIEL 455

Query: 179 NPDSAKGYKTRGMARALLGQWEEA 202
           +P   KGY  +G  +  + ++E+A
Sbjct: 456 DPTFTKGYTRKGAVQFFMKEYEKA 479


>IMGA|AC174277_61.4 Amidase chr04_pseudomolecule_IMGAG_V2
           39119246-39125898 F EGN_Mt071002 20080227
          Length = 591

 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%)

Query: 113 EASQLAKAKAMEAISEGNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDA 172
           +++++AK K  +A  +   ++AI   T+AI L   +A  Y NRA  Y+++     A  D 
Sbjct: 474 QSAEIAKEKGNQAYKDKQWQKAIGFYTEAIKLCGNNATYYSNRAQAYLELGSYLQAEADC 533

Query: 173 NAALEINPDSAKGYKTRGMARALLGQWEEAAKDLHVASKLD 213
             A+ ++  S K Y  RG AR +LG ++EA  D   A  L+
Sbjct: 534 TKAISLDKKSVKAYFRRGTAREMLGYYKEAIDDFKYALVLE 574


>IMGA|CT025844_7.4 CS; SGS chr05_pseudomolecule_IMGAG_V2
           2280324-2275934 E EGN_Mt071002 20080227
          Length = 374

 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 49/82 (59%)

Query: 121 KAMEAISEGNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEINP 180
           KA EA  + +   A++  + AI ++PT+A ++ +RA  +IK+     A+ DAN A+++NP
Sbjct: 8   KAKEAFFDDDFTLAVDFYSQAIEIDPTNANLFADRAQSHIKLNAFTEAVSDANKAIQLNP 67

Query: 181 DSAKGYKTRGMARALLGQWEEA 202
           + +K Y  +G A   L ++  A
Sbjct: 68  NLSKAYLRKGTACINLEEYHTA 89


>IMGA|AC139354_12.4 TPR repeat chr01_pseudomolecule_IMGAG_V2
           9134047-9142603 E EGN_Mt071002 20080227
          Length = 482

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 133 EAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEINPDSAKGYKTRGMA 192
           +AIE    AI++   SA+ Y NRA+ Y ++ +   AI+D+  ++EI+P+ +K Y   G+A
Sbjct: 200 DAIELYNCAIAIYEKSAVYYCNRAAAYTQINRYTEAIQDSLRSIEIDPNYSKAYSRLGLA 259

Query: 193 RALLGQWEEAA-KDLHVASKLDYDEE 217
               G + +A  K    A +LD + E
Sbjct: 260 YYAQGNYRDAIDKGFKKALQLDPNNE 285


>IMGA|AC146561_47.4 Tetratricopeptide-like helical
           chr05_pseudomolecule_IMGAG_V2 5625070-5629839 E
           EGN_Mt071002 20080227
          Length = 559

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 42/74 (56%)

Query: 129 GNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEINPDSAKGYKT 188
           G   EAIE LT A+   P +A +   R  V  K K+ N A+ D +A ++++ D+   Y  
Sbjct: 357 GEFVEAIEDLTKALEFEPNTADILHERGIVNFKFKEFNTAVEDLSACVQLDRDNKSAYTY 416

Query: 189 RGMARALLGQWEEA 202
            G+A + +G++++A
Sbjct: 417 LGLALSSIGEYKKA 430



 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 8/91 (8%)

Query: 120 AKAMEAISEGNLEEAIESLTDAI----SLNPTSAIMYGNRASVYIKMKKPNAAIRDANAA 175
           ++ +  ++EG    AI S+ D I    S  P + I    R + Y   ++ ++AI D   A
Sbjct: 280 SRGIAEVNEGKYAHAI-SIFDQILKEDSAYPEALI---GRGTAYAFKRELHSAIADFTKA 335

Query: 176 LEINPDSAKGYKTRGMARALLGQWEEAAKDL 206
           ++ NP + + +K RG ARA LG++ EA +DL
Sbjct: 336 IQYNPAAGEAWKRRGQARAALGEFVEAIEDL 366



 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 36/85 (42%)

Query: 131 LEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEINPDSAKGYKTRG 190
           L  AI   T AI  NP +   +  R      + +   AI D   ALE  P++A     RG
Sbjct: 325 LHSAIADFTKAIQYNPAAGEAWKRRGQARAALGEFVEAIEDLTKALEFEPNTADILHERG 384

Query: 191 MARALLGQWEEAAKDLHVASKLDYD 215
           +      ++  A +DL    +LD D
Sbjct: 385 IVNFKFKEFNTAVEDLSACVQLDRD 409


>IMGA|AC137552_37.4 Peptidylprolyl isomerase, FKBP-type
           chr04_pseudomolecule_IMGAG_V2 12876349-12888309 E
           EGN_Mt071002 20080227
          Length = 626

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 4/111 (3%)

Query: 116 QLAKAKAMEAISEGNLEEAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAA 175
           +LAKAK  + + E N     +     I  + T  +++ N A+ Y+K+ +   +I   N  
Sbjct: 419 ELAKAKYEKVLREFNHVNPQDDEEGKI-FSDTRNLLHLNVAACYLKLGECRKSIETCNKV 477

Query: 176 LEINPDSAKGYKTRGMARALLGQWEEAAKDLHVASKLDYDEE---ISAVLK 223
           LE NP   KG   RGMA    G +EEA  D  +  K+D   E    +A+LK
Sbjct: 478 LEANPAHVKGLYRRGMAYMGNGDFEEARADFKMMIKVDKSTESDATAALLK 528


>IMGA|AC175047_5.4 Heat shock protein DnaJ, N-terminal
            chr07_pseudomolecule_IMGAG_V2 25105020-25115509 E
            EGN_Mt071002 20080227
          Length = 1222

 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 129  GNLEEAIESLTDAISLN----PTSAIMYGNRASVYIKMKKPNAAIRDANAALEINPDSAK 184
            GN  EA+E+ T A+S N    P +AI +GNRA+ +    +   AI D + A+ ++ + AK
Sbjct: 947  GNYSEAVENYTAALSSNIKSRPFAAICFGNRAAAHQASGQIADAIADCSMAMALDENYAK 1006

Query: 185  GYKTRGMARALLGQWEEAAKDL 206
                R     ++  +E+AA DL
Sbjct: 1007 AISRRATLHEMVRDYEQAACDL 1028


>IMGA|AC166314_13.4 Thioredoxin domain 2; Thioredoxin fold
           chr05_pseudomolecule_IMGAG_V2 21150892-21146782 F
           EGN_Mt071002 20080227
          Length = 676

 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 38/73 (52%)

Query: 133 EAIESLTDAISLNPTSAIMYGNRASVYIKMKKPNAAIRDANAALEINPDSAKGYKTRGMA 192
           EA     + +  +P ++++  NRA+   K+ +   AI D +AAL +NP  +K    R   
Sbjct: 462 EACAVYNEGLDHDPHNSVLLCNRAACRSKLGQYEKAIEDCDAALMLNPCYSKARLRRAYC 521

Query: 193 RALLGQWEEAAKD 205
            A L +WE A +D
Sbjct: 522 NAKLERWEVAIQD 534