Miyakogusa Predicted Gene
- chr4.CM0006.810.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr4.CM0006.810.nc - phase: 0
(1801 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC124967_43.5 Chaperonin Cpn60/TCP-1; Phosphatidylinositol-... 310 3e-84
IMGA|AC124967_42.5 Zinc finger, FYVE/PHD-type chr08_pseudomolecu... 271 1e-72
IMGA|AC151674_4.4 Phosphatidylinositol-4-phosphate 5-kinase chr0... 59 1e-08
IMGA|AC124967_19.5 Zinc finger, FYVE/PHD-type chr08_pseudomolecu... 59 3e-08
IMGA|AC146853_40.4 Phosphatidylinositol-4-phosphate 5-kinase chr... 56 1e-07
IMGA|AC121234_13.4 Phosphatidylinositol-4-phosphate 5-kinase chr... 53 1e-06
IMGA|CR931734_1.4 GroEL-like chaperone, ATPase chr05_pseudomolec... 52 3e-06
IMGA|AC147961_18.5 Phosphatidylinositol-4-phosphate 5-kinase chr... 49 1e-05
IMGA|CT030174_9.4 GroEL-like chaperone, ATPase chr03_pseudomolec... 49 2e-05
IMGA|AC150890_25.4 Zinc finger, FYVE/PHD-type chr02_pseudomolecu... 45 2e-04
IMGA|AC202310_20.4 Phosphatidylinositol-4-phosphate 5-kinase chr... 45 3e-04
>IMGA|AC124967_43.5 Chaperonin Cpn60/TCP-1;
Phosphatidylinositol-4-phosphate 5-kinase
chr08_pseudomolecule_IMGAG_V2 30853539-30852403 H
EGN_Mt071002 20080227
Length = 317
Score = 310 bits (794), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/230 (69%), Positives = 173/230 (75%), Gaps = 3/230 (1%)
Query: 217 SRHFSHANHYDGPVNIHEIDRVYGPHINHSDGDNFQETSSSCLTATPNLDQEGVDGVQAP 276
SRH+S N YD VNI IDRVYGPHI HSDGDN QE SSSCL NL+ +G DGVQA
Sbjct: 87 SRHYSRINDYDDLVNIQGIDRVYGPHIMHSDGDNIQERSSSCLAPPQNLELDGTDGVQAL 146
Query: 277 GKEADEHDH-DGCETSPYHEESSNAEPVDFENNGLLWLXXXXXXXXXXXXXXXXXXXXXX 335
GKEADEHDH D CETSPY EE++N EPVDFENNGLLWL
Sbjct: 147 GKEADEHDHTDECETSPYQEEANNMEPVDFENNGLLWL-PPEPEDEEDDREAALFDDDED 205
Query: 336 XGSTGEWGYLRSSNSFGSGESRNRDKSIEDSRKAMKNVVEGHFRALIAQLLQSEELSICD 395
GSTGEWGYLRSS SFGSGE R+RDKS E++RKAMKNVVEGHFRAL+AQLLQ E L++ D
Sbjct: 206 EGSTGEWGYLRSSASFGSGEFRSRDKSGENNRKAMKNVVEGHFRALVAQLLQVESLTV-D 264
Query: 396 EENKERWLDIITTLSWEAATLLKPDMSGAGGMDPGGYVKVKCIACGHPKE 445
++ KE WLDIITTLSWEAATLLKPD S GGMDPGGYVKVKCIACGH E
Sbjct: 265 DDGKESWLDIITTLSWEAATLLKPDTSRGGGMDPGGYVKVKCIACGHRNE 314
>IMGA|AC124967_42.5 Zinc finger, FYVE/PHD-type
chr08_pseudomolecule_IMGAG_V2 30854874-30854145 H
EGN_Mt071002 20080227
Length = 211
Score = 271 bits (694), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 146/202 (72%), Gaps = 2/202 (0%)
Query: 1 MGTPEKKVSDFIDVVRSWIPRRADSPNVSRDFWMPDQSCRVCYECDSQFTIFNRRHHCRI 60
MGTP+KK+SD +DVVRSWIPRR + PNVSRDFWMPDQSC +CYECDSQFT+FNRRHHCRI
Sbjct: 1 MGTPDKKISDLVDVVRSWIPRRVEPPNVSRDFWMPDQSCPLCYECDSQFTVFNRRHHCRI 60
Query: 61 CGRVFCAKCTANSIPVPLDGTSTGREDWERIRVCNFCFNQWQQAVATVDN-GXXXXXXXX 119
CGRVFCAKCTAN +P + GREDWERIRVCN+CF QW++ VA VDN
Sbjct: 61 CGRVFCAKCTANFVPSSPREPNIGREDWERIRVCNYCFKQWEKGVAAVDNVTPSATPCLS 120
Query: 120 XXXXXXXXXXXXXXXXXXXXXXXAGSVPYSTGPYQRVPYSPHQSSEMNTVTDEQENLNSG 179
AGSVPYSTG YQ VP SPHQSS+MN +TDEQENLNSG
Sbjct: 121 PSPSSTSLVSSKSSCTCHSSSSTAGSVPYSTGSYQCVPSSPHQSSQMNLITDEQENLNSG 180
Query: 180 -STNPSADVENLSSNQFSYCFN 200
STNPS VENL+SNQ+ YCFN
Sbjct: 181 MSTNPSEAVENLNSNQYGYCFN 202
>IMGA|AC151674_4.4 Phosphatidylinositol-4-phosphate 5-kinase
chr04_pseudomolecule_IMGAG_V2 31624839-31629944 E
EGN_Mt071002 20080227
Length = 767
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 1553 GKSNVFFAKTLDDRFIIKQVTKTELESFIKFAQAYFKYLSESISTGSPTCLAKILGIYQV 1612
GKS F + DD+F+IK + K EL+ + Y+ + + + T + K GI+++
Sbjct: 440 GKSGSIFFISQDDKFVIKTLKKYELKVLLNMLPKYYHH----VGSYENTLITKFFGIHRI 495
Query: 1613 TSKHVKGGKETKMDVLVMEXXXXXXXXXXXXXXKGSSRSRY-NPDTSGSNKVLLDQNLIE 1671
T ++GGK+ + V++ KGSS+ RY + D SN L D +L
Sbjct: 496 T---LRGGKKVRF-VVMGNMFCTELHIHRRYDLKGSSQGRYTSQDKINSNTTLKDLDL-- 549
Query: 1672 AMPTSPIFVGNKAKRLLERAVWNDTAFLASIYVMDYSLLVGV 1713
+ K + L + + D FL S +++DYSLL+G+
Sbjct: 550 ---KYEFHMDKKLRESLFKQISLDCKFLESQHIIDYSLLLGL 588
>IMGA|AC124967_19.5 Zinc finger, FYVE/PHD-type
chr08_pseudomolecule_IMGAG_V2 30862865-30858976 F
EGN_Mt071002 20080227
Length = 481
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 33 WMPDQSCRVCYECDSQFTIFNR-RHHCRICGRVFCAKCTANSIPVPLDGTSTGREDWERI 91
W+PD S C +C S FT R RHHCR CG +FC CT +P+ +
Sbjct: 168 WLPDSSTTACMQCASPFTALTRGRHHCRFCGGIFCRICTKGRCLLPVRFRERNPQ----- 222
Query: 92 RVCNFCFNQ 100
RVC+ C+++
Sbjct: 223 RVCDSCYDR 231
>IMGA|AC146853_40.4 Phosphatidylinositol-4-phosphate 5-kinase
chr00_pseudomolecule_IMGAG_V2 13185025-13189338 H
EGN_Mt071002 20080227
Length = 761
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 30/202 (14%)
Query: 1524 FEALRKICCPSELDFVRSL--SRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFI 1581
F ALRK+ D++ S+ + + + GKS FF T DDR++IK + K E++ F+
Sbjct: 437 FRALRKLFKVDPADYMLSICGNEALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEVKVFL 496
Query: 1582 KFAQAYFKYLSESISTGSPTCLAKILGIYQVTSKHVKGGKETKMDVLVM-EXXXXXXXXX 1640
K AY+K+ + T T + K G++ V + G + K+ ++M
Sbjct: 497 KMLPAYYKH----VRTFENTLVTKFFGLHCVK---LTGSAQKKVRFVIMGNIFCSQYVIH 549
Query: 1641 XXXXXKGSSRSRYNPDTSGSNKVLLDQNLIEAMPTSPI------FVGNKAKRLLE---RA 1691
KGS+ R D+ E PT+ + F+ K E R
Sbjct: 550 RRFDLKGSTFGR-----------TTDKPEAEVEPTTTLKDLDLNFIFRLQKSWFEEFCRQ 598
Query: 1692 VWNDTAFLASIYVMDYSLLVGV 1713
V D FL +MDYS+LVG+
Sbjct: 599 VDRDCDFLQHERIMDYSMLVGL 620
>IMGA|AC121234_13.4 Phosphatidylinositol-4-phosphate 5-kinase
chr08_pseudomolecule_IMGAG_V2 9481584-9477091 E
EGN_Mt071002 20080227
Length = 774
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 1524 FEALRKICCPSELDFVRSL--SRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFI 1581
F ALRK+ D++ SL + + + GKS FF T DDR++IK + K+E++ F+
Sbjct: 449 FRALRKLFKVDPADYMISLCGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKSEVKVFL 508
Query: 1582 KFAQAYFKYLSESISTGSPTCLAKILGIYQVTSKHVKGGKETKMDVLVM-EXXXXXXXXX 1640
+ Y+K+ + T + K G++ V + G + K+ ++M
Sbjct: 509 RMLPGYYKH----VRAFENTLVTKFFGLHCV---KLPGASQKKVRFVIMGNLFCSQYAIH 561
Query: 1641 XXXXXKGSSRSRYNPDTSGSNKVLLDQNLIEAMPTSPIFVGNKAK-RLLERAVWNDTAFL 1699
KGS+ R T S + + ++ + + IF K+ + R V D FL
Sbjct: 562 RRFDLKGSTFGR---TTDKSEEEIEPTTTLKDLDLNYIFRLRKSWFQEFCRQVDKDCEFL 618
Query: 1700 ASIYVMDYSLLVGV 1713
+MDYS+LVG+
Sbjct: 619 EQERIMDYSMLVGL 632
>IMGA|CR931734_1.4 GroEL-like chaperone, ATPase
chr05_pseudomolecule_IMGAG_V2 31505632-31513268 E
EGN_Mt071002 20080227
Length = 471
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 103/255 (40%), Gaps = 25/255 (9%)
Query: 414 ATLLKPDMSGAGGMDPGGYVKVKCIACGHPKESVVVKGIVCKKNVAH---RRMTSKIDKP 470
A+++ + G D + +K + G+ ++S +V G+ KK ++ + K P
Sbjct: 89 ASMVVDAVIAIGTDDRLNMIGIKKVPGGNMRDSFLVNGVAFKKTFSYAGFEQQPKKFLDP 148
Query: 471 RFLILGGALEYQ--------RVSNQLSSVDTLLQQEMDHLKMAVARIAAHHPNVLLVEKS 522
+ L+L LE + R+S+ S +++ E + + + + V+L +
Sbjct: 149 KILLLNVELELKSEKENAEIRLSDP-SQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLA 207
Query: 523 VSRYAQEYLLAKDISLVLNIKRPLLERIARCTGAQIVPSIDHLTSQKQGYCETFHVDKFF 582
+ A +Y +DI + L+R+A TG + S++++ + G CE F +
Sbjct: 208 IGDLATQYFADRDIFCAGRVAEEDLKRVAAATGGTVQTSVNNIIDEVLGTCEIFEEKQVG 267
Query: 583 EEHGTAGQGGKKSTKTLMFFEGCPKPLGCTILLKGANGDELKKLKHVVQYGIFAAYHLAL 642
E F GCP TI+L+G +++ + + I
Sbjct: 268 NER-------------FNIFNGCPSGQTATIVLRGGADQFIEEAERSLHDAIMIVRRAMK 314
Query: 643 ETSFLADEGASPLEF 657
++ +A GA +E
Sbjct: 315 NSTVVAGGGAIDMEI 329
>IMGA|AC147961_18.5 Phosphatidylinositol-4-phosphate 5-kinase
chr07_pseudomolecule_IMGAG_V2 24541739-24545362 H
EGN_Mt071002 20080227
Length = 795
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 16/195 (8%)
Query: 1524 FEALRKICCPSELDFVRSL--SRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFI 1581
F LRK+ D++ S+ + + + GKS FF T DDR++IK + K E++ I
Sbjct: 475 FRTLRKLFKVDPADYMLSICGNDALRELSSPGKSGSFFYLTNDDRYMIKTMRKAEVKVLI 534
Query: 1582 KFAQAYFKYLSESISTGSPTCLAKILGIYQVTSKHVKGGKETKMDVLVM-EXXXXXXXXX 1640
K AY+ + E + T L K G++ V + G + K+ ++M
Sbjct: 535 KMLPAYYNHFREHQN----TLLTKYYGLHCV---KLNGPIQKKVRFIIMGNLFCSEYITH 587
Query: 1641 XXXXXKGSSRSRYNPDTSGSNKVLLDQ-NLIEAMPTSPIFVGNKAK-RLLERAVWNDTAF 1698
KGSS R TS ++ + + +++ + + IF+ K+ R V D
Sbjct: 588 RRYDLKGSSLGR----TSDKLEIEISETTILKDLDLNFIFLLQKSWFEEFCRQVDKDCEL 643
Query: 1699 LASIYVMDYSLLVGV 1713
L +MDYSLL+G+
Sbjct: 644 LEQEGIMDYSLLLGI 658
>IMGA|CT030174_9.4 GroEL-like chaperone, ATPase
chr03_pseudomolecule_IMGAG_V2 24618722-24614420 F
EGN_Mt071002 20080227
Length = 535
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 97/230 (42%), Gaps = 18/230 (7%)
Query: 433 VKVKCIACGHPKESVVVKGIVCKKNVAHRRMTSKIDKPRFLILGGALE-------YQRVS 485
+KV+ G +++ +V GI+ K+++H +M +I+ + IL E ++
Sbjct: 205 IKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDI 264
Query: 486 NQLSSVDTLLQQEMDHLKMAVARIAAHHPNVLLVEKSVSRYAQEYLLAKDISLVLNIKRP 545
+ + TL +QE + V + +++ + A L+ +++ V +
Sbjct: 265 DTVEKFQTLRKQEQKYFDDMVQQCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGV 324
Query: 546 LLERIARCTGAQIVPSIDHLTSQKQGYCETFHVDKFFEEHGTAGQGGKKSTKTLMFFEGC 605
LE IA TG +IVP LT++K G F GT + +++ E C
Sbjct: 325 ELELIAIATGGRIVPRFQELTAEKLGKAGIVREKAF----GT-------TKDRMLYIEHC 373
Query: 606 PKPLGCTILLKGANGDELKKLKHVVQYGIFAAYHLALETSFLADEGASPL 655
TI ++G N +++ K + + A +L S + G++ +
Sbjct: 374 ANSRAVTIFIRGGNKMIIEETKRSIHDALCVARNLIRNNSIVYGGGSAEI 423
>IMGA|AC150890_25.4 Zinc finger, FYVE/PHD-type
chr02_pseudomolecule_IMGAG_V2 6061760-6056487 E
EGN_Mt071002 20080227
Length = 395
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 33 WMPDQSCRVCYECDSQF-TIFNRRHHCRICGRVFCAKCTANSIPVPLDGTSTGREDWERI 91
W+ D + C C +F I RHHCR CG +FC +C+ +P + +
Sbjct: 81 WLADSAAAACMLCGVRFHPIMCSRHHCRFCGGIFCGECSKGRSLMPSKFRVSDPQ----- 135
Query: 92 RVCNFC 97
RVC+ C
Sbjct: 136 RVCDVC 141
>IMGA|AC202310_20.4 Phosphatidylinositol-4-phosphate 5-kinase
chr01_pseudomolecule_IMGAG_V2 13160579-13163642 H
EGN_Mt071002 20080227
Length = 781
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 1524 FEALRKICCPSELDFVRSL--SRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFI 1581
F LRK+ D++ S+ + + + GKS FF T DDR++IK + K E ++ +
Sbjct: 457 FRTLRKLFKVDAADYMLSICGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEAKALL 516
Query: 1582 KFAQAYFKYLSESISTGSPTCLAKILGIYQVTSKHVKGGKETKMDVLVMEXXX-XXXXXX 1640
+ AY+ + + + K G++ V + G + K+ ++M
Sbjct: 517 RMLPAYYNHFRAFEN----ALVTKFYGLHCVK---LNGPSQKKVRFIIMGNLFCSEYTIH 569
Query: 1641 XXXXXKGSSRSRYNPDTSGSNKVLLDQNLIEAMPTSPIFVGNKAKRL-LERAVWNDTAFL 1699
KGSS R T+ + + +++ + + IF ++ L R + D L
Sbjct: 570 RRFDLKGSSLGRI---TTKPESEITETTILKDLDLNFIFRLQRSWFLEFCRQIDRDCELL 626
Query: 1700 ASIYVMDYSLLVGV 1713
+MDYSLLVG+
Sbjct: 627 EQEGIMDYSLLVGI 640