Miyakogusa Predicted Gene
- chr4.CM0006.350.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr4.CM0006.350.nc - phase: 0
(1230 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC174310_37.5 Protein of unknown function, NUC173 chr01_pse... 747 0.0
IMGA|AC174310_17.5 nodulin-like protein chr01_pseudomolecule_IM... 333 3e-91
IMGA|AC174310_35.5 binding chr01_pseudomolecule_IMGAG_V2 16253... 209 7e-54
IMGA|AC174310_36.5 binding , related chr01_pseudomolecule_IMGAG... 163 4e-40
>IMGA|AC174310_37.5 Protein of unknown function, NUC173
chr01_pseudomolecule_IMGAG_V2 16232149-16240649 E
EGN_Mt071002 20080227
Length = 963
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/546 (68%), Positives = 425/546 (77%), Gaps = 11/546 (2%)
Query: 1 MKMEEPSFTNGDDDDFCNSILSRFGNSTAENHQHLCATVGVISQELKERNMPSSPVAYFG 60
++ME+P+F N +DD CNSILSRF STA +HQHLC +G +SQELK+ N+PS+PVAYFG
Sbjct: 4 IEMEQPTFNNESNDDICNSILSRFSKSTAVSHQHLCTVIGAMSQELKDHNLPSTPVAYFG 63
Query: 61 ATCSSLRSFASEPNPHNHSIDALLTILSLLIAGVPVPVLKTQREFLSNFIVRVLQSPSV- 119
ATCSSL EPNP +H ID+L+TILS++I VP+ VLK +RE LS IV+V+ S S
Sbjct: 64 ATCSSLNRIVPEPNPPDHVIDSLVTILSIVIVKVPMAVLKKERESLSELIVKVIHSQSSK 123
Query: 120 -SESGAVSGIKCLSHLLISRDTVDWSDVSPLFNVLLVFLTDSRPKVRRQSHLCLRDVLLN 178
SES V +KC SHLLI RD+V WSDVS LFN+LL FLTDSRPKVRRQSHL LRDVL+N
Sbjct: 124 NSESVVVDALKCASHLLIHRDSVHWSDVSTLFNLLLGFLTDSRPKVRRQSHLGLRDVLIN 183
Query: 179 FQSSSLLASASEGVTSLLERFLLLAGGANANSGEGTKGAQQVLDVLDALKECLPFLSLKY 238
FQ SSLLASASEGV +LLERFLLLAGGANAN+GEGTKGAQQVL VLDALKECLP LSLK
Sbjct: 184 FQKSSLLASASEGVKNLLERFLLLAGGANANAGEGTKGAQQVLYVLDALKECLPLLSLKD 243
Query: 239 KTSILKHFKTLLDLRHPLVTRRITDALNFLCLNPXXXXXXXX-XXXXXXXXXXXXXXNEM 297
K SILKHFKTLL+LR PLVTRRI DALNF+CLN NE+
Sbjct: 244 KNSILKHFKTLLNLRQPLVTRRIMDALNFICLNSTSEVSSEALLEVLSTLSSLSTSSNEI 303
Query: 298 SGDGLTFTTRLLDVGMKKIYTLNRQLCIIKLPIVFNALKDILASEYEEAIYAATDALKSM 357
SGDG+TFT RLLD GMKK+++LNRQ+C+IKLP VF+ LKDILASE+EEAI+AATDALKSM
Sbjct: 304 SGDGMTFTARLLDAGMKKVFSLNRQMCVIKLPSVFSDLKDILASEHEEAIFAATDALKSM 363
Query: 358 INSCVDESLIKQGVDQLTLSKNGEPRRSAPTIIEKICATIESLLDYHYAAVWDRVFQIVS 417
IN CVDESLIKQGVDQ+TL E RRS PTIIEKICATIESLLDYHYAA WDRVF +VS
Sbjct: 364 INYCVDESLIKQGVDQITLD---ESRRSGPTIIEKICATIESLLDYHYAAAWDRVFDVVS 420
Query: 418 AMFQKLGNNSPYFMRGIIKNLEDMQKLPDEDFPFRKQLHVCVGSALAAMGPETLLSLIPL 477
AMF KLG++SPYFMRGI+KNLEDMQKLPDEDFPFRKQLH C+GSAL AMGPET LS IPL
Sbjct: 421 AMFHKLGSDSPYFMRGILKNLEDMQKLPDEDFPFRKQLHTCLGSALVAMGPETFLSFIPL 480
Query: 478 NLEAEDLSDANIWLFPILK--QYIVGARLNYFTEEILPMIERVKEKAQKLENRGLMVSSR 535
NLEAEDLS +NIWLFPIL + + A F EI I +KE +K NR +
Sbjct: 481 NLEAEDLSVSNIWLFPILNTDESMAMAWPEVFVTEI---ILALKEANKKTRNRAYEILVE 537
Query: 536 NADALA 541
A AL
Sbjct: 538 IAHALG 543
Score = 548 bits (1412), Expect = e-156, Method: Compositional matrix adjust.
Identities = 289/439 (65%), Positives = 330/439 (75%), Gaps = 53/439 (12%)
Query: 819 WREIVGSFLTEIILALKEANKKTRNRAYDILVEIAHAFGDEERGGNRENLLQFFNMVAGG 878
W E+ F+TEIILALKEANKKTRNRAY+ILVEIAHA GDEERGG+R NL QFF VA G
Sbjct: 508 WPEV---FVTEIILALKEANKKTRNRAYEILVEIAHALGDEERGGDRNNLYQFFITVARG 564
Query: 879 LAGETPHMISAAAKGLARLAYEFSDLVLTAFNLLPSTFLLLQRKNREIIK---------- 928
L G+TPHMISA KGLARLAYEFSDLVLTAF+LLPST++LL++KNREI K
Sbjct: 565 LVGKTPHMISATIKGLARLAYEFSDLVLTAFDLLPSTYVLLEKKNREITKANLGLLKVLV 624
Query: 929 ---------------------------------VKLILGMLVTKCGLEAVKAVLPDEHIK 955
VKL+LGML+TKCGL+AVKAVLP++H+K
Sbjct: 625 AKSQAEGLQKHLRSVVECLFKWQDDAKNHFKAKVKLLLGMLITKCGLDAVKAVLPEDHMK 684
Query: 956 LLTXXXXXXXXXXXXXGAKSEETRSHLSKATTSRQSRWNHTKVFSDFDEDSGNSDAEYLN 1015
LL+ GAKSEE+RSH+SKATTSRQSR NH +FSDFD DS SD EYLN
Sbjct: 685 LLSNIHKIKERKERNRGAKSEESRSHVSKATTSRQSRRNHMDIFSDFDGDSAGSDTEYLN 744
Query: 1016 AKTMSRGGK-SLRLKSAASSFRSNIRLKKNLPEHFSDQSDDEPLDLLDRQKTRSALRSSD 1074
K + RGGK S LKSAASSF S + LK N+PEH SD+SDDEPLDLLDRQK RSALR S+
Sbjct: 745 GKAIFRGGKSSTHLKSAASSFGSKMILKNNIPEHLSDESDDEPLDLLDRQKVRSALR-SE 803
Query: 1075 NLKRKSRL-DDEMEVDSEGRLIIREEE-EWKNEKPDDPDYDARSERDTHLSAKSGTKGQK 1132
NLKRKSR DDEMEVDSEGRLIIREEE E +KP D +YDARSE D+HLSA+ GTK QK
Sbjct: 804 NLKRKSRSDDDEMEVDSEGRLIIREEEGEQTKKKPADSEYDARSEPDSHLSARFGTKAQK 863
Query: 1133 RRKTSD---SGWAYTGKEYASKKASGDVKRKDKLEPYAYWPLDRKMMSRRPQHRSTARKG 1189
RR+T++ +G AYTGKEYAS+KA GD+KRKDKLEPYAYWPLDRKMMSRRPQ R+ A+KG
Sbjct: 864 RRRTAEPGKAGRAYTGKEYASRKAGGDIKRKDKLEPYAYWPLDRKMMSRRPQQRAAAKKG 923
Query: 1190 MASVVKMTKKLEGQSASGV 1208
MA+VV MTK+LEG+SASG+
Sbjct: 924 MATVVNMTKRLEGKSASGM 942
>IMGA|AC174310_17.5 nodulin-like protein
chr01_pseudomolecule_IMGAG_V2 16244216-16242914 E
EGN_Mt071002 20080227
Length = 250
Score = 333 bits (854), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/219 (77%), Positives = 189/219 (86%), Gaps = 6/219 (2%)
Query: 990 QSRWNHTKVFSDFDEDSGNSDAEYLNAKTMSRGGKS-LRLKSAASSFRSNIRLKKNLPEH 1048
QSRWNHT +FS+FD DS SDAEYLN KT+SRGGKS LKSAASSFRS +RLK N+PEH
Sbjct: 3 QSRWNHTDIFSEFDGDSKGSDAEYLNGKTISRGGKSSTHLKSAASSFRSKMRLKNNIPEH 62
Query: 1049 FSDQSDDEPLDLLDRQKTRSALRSSDNLKRKSRL-DDEMEVDSEGRLIIREEEEWKNEKP 1107
SD+SDDEPLDLLDRQK RSALR S+NLKRKSR DDEMEVDSEGRLIIREE E EKP
Sbjct: 63 LSDESDDEPLDLLDRQKVRSALR-SENLKRKSRSDDDEMEVDSEGRLIIREEGEQTEEKP 121
Query: 1108 DDPDYDARSERDTHLSAKSGTKGQKRRKTSD---SGWAYTGKEYASKKASGDVKRKDKLE 1164
D +YDARSE D+HLSA+SGTK QKRR+T++ +G AYTGKEYASKKA GD+KRKDKLE
Sbjct: 122 ADSEYDARSEPDSHLSARSGTKAQKRRRTAEPGRAGRAYTGKEYASKKAGGDIKRKDKLE 181
Query: 1165 PYAYWPLDRKMMSRRPQHRSTARKGMASVVKMTKKLEGQ 1203
PYAYWPLDRKMMSRRPQHR+ A+KGMA+VV MTK+LEGQ
Sbjct: 182 PYAYWPLDRKMMSRRPQHRAAAKKGMATVVNMTKRLEGQ 220
>IMGA|AC174310_35.5 binding chr01_pseudomolecule_IMGAG_V2
16253115-16253729 H EGN_Mt071002 20080227
Length = 174
Score = 209 bits (531), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 103/163 (63%), Positives = 120/163 (73%), Gaps = 4/163 (2%)
Query: 263 DALNFLCLNPXXXXX-XXXXXXXXXXXXXXXXXNEMSGDGLTFTTRLLDVGMKKIYTLNR 321
D LNFL LNP E+SGDG+TF RLLD GMK++++LNR
Sbjct: 2 DGLNFLSLNPTSEVSPEALLEVLCTLSSLSASSTEISGDGMTFIARLLDAGMKRVFSLNR 61
Query: 322 QLCIIKLPIVFNALKDILASEYEEAIYAATDALKSMINSCVDESLIKQGVDQLTLSKNGE 381
Q+C++KLP VFN LKDILASE+EEAI AAT+ALKSMIN C+DESLIKQGVDQ+TL E
Sbjct: 62 QMCVVKLPSVFNDLKDILASEHEEAILAATEALKSMINCCIDESLIKQGVDQITLD---E 118
Query: 382 PRRSAPTIIEKICATIESLLDYHYAAVWDRVFQIVSAMFQKLG 424
R S PTIIEKIC T+ESLLDYHYAA WDRVF++VS+MF KLG
Sbjct: 119 SRMSGPTIIEKICVTVESLLDYHYAAAWDRVFEVVSSMFHKLG 161
>IMGA|AC174310_36.5 binding , related chr01_pseudomolecule_IMGAG_V2
16251414-16252867 H EGN_Mt071002 20080227
Length = 135
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 96/129 (74%)
Query: 1 MKMEEPSFTNGDDDDFCNSILSRFGNSTAENHQHLCATVGVISQELKERNMPSSPVAYFG 60
++MEE +F N +DD CNSILSRF NSTA NHQHLCA +G +SQELK+ N+ SSPVAYF
Sbjct: 4 IEMEESTFNNESNDDICNSILSRFSNSTAVNHQHLCAVIGAMSQELKDHNLSSSPVAYFC 63
Query: 61 ATCSSLRSFASEPNPHNHSIDALLTILSLLIAGVPVPVLKTQREFLSNFIVRVLQSPSVS 120
ATCSSL ASEPNP H +DALLT LS+++ VPV VLK +REFLS + +V+ PS S
Sbjct: 64 ATCSSLDRTASEPNPPIHLMDALLTFLSIVMFKVPVAVLKEKREFLSELVTKVVMLPSSS 123
Query: 121 ESGAVSGIK 129
ES V G+
Sbjct: 124 ESAVVHGLN 132