Miyakogusa Predicted Gene

chr3.LjT23O13.80.nd

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr3.LjT23O13.80.nd - phase: 0 /partial
         (364 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC159141_4.4 CBS chr02_pseudomolecule_IMGAG_V2 24512312-245...   536   e-153
IMGA|AC136286_34.4 CBS chr05_pseudomolecule_IMGAG_V2 15846591-15...    48   5e-06
IMGA|AC157507_22.5 CBS chr02_pseudomolecule_IMGAG_V2 4014160-401...    44   1e-04
IMGA|AC174370_34.4 CBS chr08_pseudomolecule_IMGAG_V2 22870737-22...    43   3e-04

>IMGA|AC159141_4.4 CBS chr02_pseudomolecule_IMGAG_V2
           24512312-24514545 E EGN_Mt071002 20080227
          Length = 371

 Score =  536 bits (1382), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 278/362 (76%), Positives = 296/362 (81%), Gaps = 17/362 (4%)

Query: 1   VGDLMVDQKKRLVEVPYTASLAHTMNTLVANKXXXXXXXXXXGQWIGAGGSMIVESDKQT 60
           V DLMV+ KKRLVEVPYTASL  TMNTLVANK          GQWIGAGGSMIVESDKQT
Sbjct: 24  VKDLMVN-KKRLVEVPYTASLGQTMNTLVANKVVAVPVAAPPGQWIGAGGSMIVESDKQT 82

Query: 61  GAVRKHYIGMVTMLDIVAHIAXXXXXXXXXXXXXXXXXXXQKMCVPVSSIIGHSFEGLSL 120
           GAVRKHYIGMVTMLDIVAHIA                   Q+M VPVSSIIGHSFEGLSL
Sbjct: 83  GAVRKHYIGMVTMLDIVAHIAGDDHLSGGDDVEEDLD---QRMSVPVSSIIGHSFEGLSL 139

Query: 121 WTLNPNTSLLDCMEVFSKGVHRAMVPIDSHMENVSTGVELVESASGYQMLTQMDVLRFLK 180
           WTLNPNTSLLDCMEV SKGVHRAM+P DS +ENVS GVEL+ES+S YQMLTQMDVLRFLK
Sbjct: 140 WTLNPNTSLLDCMEVLSKGVHRAMIPTDSQIENVSAGVELIESSSSYQMLTQMDVLRFLK 199

Query: 181 DHAGELQSIL-SCSVQDLGANTERIYAITDKTKLVDAIKCLKAAMLNAVPIVEASDLGED 239
           DH  ELQS L S SVQDLGA TERIYAIT++TKL+DAIKCLKAAMLNA+PIV ASD    
Sbjct: 200 DHGNELQSTLHSHSVQDLGAITERIYAITERTKLIDAIKCLKAAMLNALPIVRASD---- 255

Query: 240 DHKQHINGRCRKLIGTFSATDLRGCYLATLKSWLGISALAFTEEIATSPLFTASDTQN-T 298
                  GRCRKL+GTFSATDLRGCY+ TLKSWLGISALAFTE+IATSPL+T SDTQN  
Sbjct: 256 -------GRCRKLVGTFSATDLRGCYINTLKSWLGISALAFTEQIATSPLYTTSDTQNDI 308

Query: 299 GTSKRELVTCHAESPLSEVIDKALTNHVHRVWVVDQEGLLMGVVSLTDVIRVMRQSMLSQ 358
           GT KRELVTC+AES LSEVIDKA+ NHVHRVWVVDQEGLL+GVVSLTDVIRV+RQSMLS 
Sbjct: 309 GTPKRELVTCYAESTLSEVIDKAVANHVHRVWVVDQEGLLVGVVSLTDVIRVIRQSMLSD 368

Query: 359 LD 360
            D
Sbjct: 369 AD 370


>IMGA|AC136286_34.4 CBS chr05_pseudomolecule_IMGAG_V2
           15846591-15848187 E EGN_Mt071002 20080227
          Length = 218

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 86/188 (45%), Gaps = 29/188 (15%)

Query: 168 QMLTQMDVLRFLKDHAGE--LQSILSCSVQDLG---ANTERIYAITDKTKLVDAIKCLKA 222
             +TQ  V++ L+   G      I +  + DLG    + +++ +I     +++A K ++ 
Sbjct: 28  NFITQSAVIQGLEGCRGRDWFDCIAARPMADLGLPFMSADKVISIQSNELILEAFKIMRD 87

Query: 223 AMLNAVPIVEASDLGEDDHKQHINGRCRKLIGTFSATDLRGCYLAT--LKSWLGISALAF 280
             +  +P+VE              G  + ++G  S  D+R   L      ++  ++ + F
Sbjct: 88  NQIGGLPVVE--------------GPAKTIVGNLSIRDIRYLLLKPEIFSNFRNLTVMDF 133

Query: 281 TEEIATSPLFTASDTQNTGTSKRELVTCHAESPLSEVIDKALTNHVHRVWVVDQEGLLMG 340
            ++I ++       +  +G   R  +TC  ++ L  VI    +  +HR++ V+ +  ++G
Sbjct: 134 MKKIVSA-------SYESGKVTRP-ITCKPDATLQSVIHTLASQSIHRIYTVNGQDQVVG 185

Query: 341 VVSLTDVI 348
           V++L DVI
Sbjct: 186 VITLRDVI 193


>IMGA|AC157507_22.5 CBS chr02_pseudomolecule_IMGAG_V2
           4014160-4016137 H EGN_Mt071002 20080227
          Length = 396

 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 35/56 (62%)

Query: 302 KRELVTCHAESPLSEVIDKALTNHVHRVWVVDQEGLLMGVVSLTDVIRVMRQSMLS 357
           + E + C+  S L  V+ +AL++ V  VWVV ++G L G+V+   ++R+ R+ + S
Sbjct: 339 RSEAIVCYPWSSLVAVMIQALSHRVSYVWVVQEDGTLYGIVTFQSMLRIFREHLKS 394


>IMGA|AC174370_34.4 CBS chr08_pseudomolecule_IMGAG_V2
           22870737-22873569 F EGN_Mt071002 20080227
          Length = 432

 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 100/252 (39%), Gaps = 32/252 (12%)

Query: 112 GHSFEGLSLWTLNPNTSLLDCMEVFSKGVHRAMVPIDSHM-------ENVSTGVELVESA 164
           G+ FE L+   L  NT + D    F      A+   +S +       +     V +V+  
Sbjct: 171 GNFFEDLTSSELYKNTKVQDISGTFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLG 230

Query: 165 SGY--QMLTQMDVLRFLKDHAGELQSILSCSVQDLG------ANTERIYAITDKTKLVDA 216
           SG    ++TQ  V+  L + AG LQ   S   ++L          ++I  + +   ++ A
Sbjct: 231 SGTIDNIITQPAVIHMLAECAG-LQWFESWGTKELSDVGLPLVTPKQIIKVYEDEPVLQA 289

Query: 217 IKCLKAAMLNAVPIVEASDLGEDDHKQHINGRCRKLIGTFSATDLRGCYLATLKSWLGIS 276
            K ++   +  VP+++                    +G  S  D++  +L T        
Sbjct: 290 FKEMRKKRVGGVPVIKRGGT--------------TAVGNISLRDVQ--FLLTAPEIYHDY 333

Query: 277 ALAFTEEIATSPLFTASDTQNTGTSKRELVTCHAESPLSEVIDKALTNHVHRVWVVDQEG 336
                ++  TS        +N      E +TC  +  + E+I       +HRV+VVD +G
Sbjct: 334 RTITVKDFLTSVRSYLEKNKNAFPMSSEFITCKRDCTVKELIQLLDKEQIHRVYVVDDDG 393

Query: 337 LLMGVVSLTDVI 348
            L G+++L D+I
Sbjct: 394 NLEGLITLRDII 405