Miyakogusa Predicted Gene
- chr3.LjT15F18.40.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr3.LjT15F18.40.nd - phase: 0
(155 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC160241_10.4 Heat shock protein Hsp20 chr08_pseudomolecule... 222 5e-59
IMGA|AC139852_20.4 Heat shock protein Hsp20 chr07_pseudomolecule... 75 8e-15
IMGA|AC139852_16.4 Heat shock protein Hsp20 chr07_pseudomolecule... 75 1e-14
IMGA|AC162162_27.4 Heat shock protein Hsp20 chr01_pseudomolecule... 73 5e-14
IMGA|CT967316_3.4 Heat shock protein Hsp20 chr03_pseudomolecule_... 71 2e-13
IMGA|AC139852_14.4 Heat shock protein Hsp20 chr07_pseudomolecule... 69 6e-13
IMGA|AC139852_37.4 Heat shock protein Hsp20 chr07_pseudomolecule... 66 7e-12
IMGA|AC161405_19.4 Heat shock protein Hsp20 chr05_pseudomolecule... 64 3e-11
IMGA|CU459035_13.3 Heat shock protein Hsp20 chr05_pseudomolecule... 57 3e-09
IMGA|CT009540_10.5 Heat shock protein Hsp20 chr03_pseudomolecule... 53 5e-08
IMGA|AC136973_20.4 Heat shock protein Hsp20 chr02_pseudomolecule... 51 2e-07
IMGA|AC161403_41.4 Heat shock protein Hsp20 chr04_pseudomolecule... 47 3e-06
IMGA|AC123572_6.4 Heat shock protein Hsp20 chr03_pseudomolecule_... 46 7e-06
IMGA|AC147434_78.5 Heat shock protein Hsp20 chr05_pseudomolecule... 45 1e-05
IMGA|AC151461_33.4 Heat shock protein Hsp20 chr07_pseudomolecule... 44 3e-05
IMGA|AC139852_12.4 Heat shock protein Hsp20 chr07_pseudomolecule... 42 1e-04
IMGA|AC146307_34.4 Heat shock protein Hsp20 chr06_pseudomolecule... 40 3e-04
>IMGA|AC160241_10.4 Heat shock protein Hsp20
chr08_pseudomolecule_IMGAG_V2 6788744-6792978 E
EGN_Mt071002 20080227
Length = 150
Score = 222 bits (565), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/128 (85%), Positives = 115/128 (89%)
Query: 28 PSRGHDNQENRGGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKR 87
PSR H+N E+R SSIPVDILDTPKEY+FF+DVPGLSKSEIQVTIEDENTLVI+SNGKR
Sbjct: 23 PSRDHENHESRRRASSIPVDILDTPKEYIFFLDVPGLSKSEIQVTIEDENTLVIKSNGKR 82
Query: 88 KRQDSEDEGCKYLRLERRGPQNLLRKFRLPENANVSAITAKSENGVLTVVVEKLPPPQKS 147
KRQD EDEGCKY+RLERR PQ LLRKFRLPENANVSAITAK ENGVLTV VEK PP KS
Sbjct: 83 KRQDGEDEGCKYIRLERRAPQKLLRKFRLPENANVSAITAKCENGVLTVNVEKHTPPPKS 142
Query: 148 KTVEVAIA 155
KTVEVAIA
Sbjct: 143 KTVEVAIA 150
>IMGA|AC139852_20.4 Heat shock protein Hsp20
chr07_pseudomolecule_IMGAG_V2 6662997-6663760 E
EGN_Mt071002 20080227
Length = 193
Score = 75.5 bits (184), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 4/111 (3%)
Query: 31 GHDNQENRGGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQ 90
G + E +S VD +TP+ +V DVPG+ K EI++ +E+ V+R +G+RK++
Sbjct: 62 GVEKNEPSMSLSPARVDWKETPEGHVIMFDVPGIRKDEIKIEVEENR--VLRVSGERKKE 119
Query: 91 DSEDEGCKYLRLERRGPQNLLRKFRLPENANVSAITAKSENGVLTVVVEKL 141
+ E +G + R+ER + R+FRLPEN ++ ++ AK ENGVLT+ + KL
Sbjct: 120 E-EKQGDHWHRVERSYGK-FWRQFRLPENVDLDSVKAKMENGVLTLTLNKL 168
>IMGA|AC139852_16.4 Heat shock protein Hsp20
chr07_pseudomolecule_IMGAG_V2 6674819-6673979 F
EGN_Mt071002 20080227
Length = 196
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 46 VDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCKYLRLERR 105
VD +TP +V +DVPG+ K EI++ +E+ V+R +G+RK+++ E +G + R+ER
Sbjct: 80 VDWKETPDGHVIMLDVPGIRKDEIKIEVEENR--VLRVSGERKKEE-EKQGDHWHRVERS 136
Query: 106 GPQNLLRKFRLPENANVSAITAKSENGVLTVVVEKL 141
+ R+FRLPEN ++ ++ AK ENGVLT+ + KL
Sbjct: 137 YGK-FWRQFRLPENVDLDSVKAKMENGVLTLTLNKL 171
>IMGA|AC162162_27.4 Heat shock protein Hsp20
chr01_pseudomolecule_IMGAG_V2 18402003-18402515 H
EGN_Mt071002 20080227
Length = 170
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 84/134 (62%), Gaps = 7/134 (5%)
Query: 21 TMEKLMFPSRGHDNQENRGGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLV 80
ME+ F G + ++ +S + VD +TP+E+V MDVPGL K +I++ +E EN+ V
Sbjct: 21 VMEQTYF---GVEKDQSAMTLSPVKVDWKETPEEHVIVMDVPGLRKDKIKIEVE-ENS-V 75
Query: 81 IRSNGKRKRQDSEDEGCKYLRLERRGPQNLLRKFRLPENANVSAITAKSENGVLTVVVEK 140
+R G+RK++ E +G ++ R ER + R+FRLPENA++ ++ AK ENGVLT+ + K
Sbjct: 76 LRVIGERKKE-EEKKGDRWHRAERSYGK-FWRQFRLPENADLDSVKAKMENGVLTLTLRK 133
Query: 141 LPPPQKSKTVEVAI 154
L + T V+I
Sbjct: 134 LSHGKIKSTRLVSI 147
>IMGA|CT967316_3.4 Heat shock protein Hsp20
chr03_pseudomolecule_IMGAG_V2 19274496-19273735 F
EGN_Mt071002 20080227
Length = 158
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 8/121 (6%)
Query: 20 ETMEK-LMFPSRGHDNQENRGGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENT 78
+T EK L P+R + + +++ P D+ + P YVF +D+PGL +I+V +EDEN
Sbjct: 25 DTTEKNLNAPTRTY--VRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDENV 82
Query: 79 LVIRSNGKRKRQDSEDEGCKYLRLERRGPQNLLRKFRLPENANV-SAITAKSENGVLTVV 137
L+I KR+ + KYL++ERR + +RKF LPENA+V ++A ++GVLTV
Sbjct: 83 LLISGERKREEEKEG---GKYLKMERRVGK-FMRKFVLPENADVEGGVSAVCQDGVLTVT 138
Query: 138 V 138
V
Sbjct: 139 V 139
>IMGA|AC139852_14.4 Heat shock protein Hsp20
chr07_pseudomolecule_IMGAG_V2 6669056-6668559 H
EGN_Mt071002 20080227
Length = 165
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 46 VDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCKYLRLERR 105
VD +T E+V MDVPGL K EI++ + + L R G+RK++ +E +G ++ ++ER
Sbjct: 65 VDWKETSDEHVIMMDVPGLRKGEIKIGVAENGML--RIIGERKKE-AEKKGDRWHKVERV 121
Query: 106 GPQNLLRKFRLPENANVSAITAKSENGVLTVVVEKL 141
+ R+ RLPENA++ +I A ENGVLT+ KL
Sbjct: 122 YGK-FWRQLRLPENADLDSIKANKENGVLTLTFNKL 156
>IMGA|AC139852_37.4 Heat shock protein Hsp20
chr07_pseudomolecule_IMGAG_V2 6665638-6666225 H
EGN_Mt071002 20080227
Length = 195
Score = 65.9 bits (159), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 37 NRGGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEG 96
++ ++SI VD +T E+V +DVPG K EI++ + + L + G+RK++ E +G
Sbjct: 62 DQSAMTSI-VDWKETSDEHVIMIDVPGFRKDEIKIEVVGNSVLSVI--GERKKE-VEKKG 117
Query: 97 CKYLRLERRGPQNLLRKFRLPENANVSAITAKSENGVLTVVVEKLPPPQKSKTVEVA 153
++ R ER + R+ RLPENA+ ++ AK ENGVL + + KL + K++ V
Sbjct: 118 DRWHRAERMYGK-FWRQLRLPENADFDSVKAKVENGVLILTLNKLSHEYQIKSIRVV 173
>IMGA|AC161405_19.4 Heat shock protein Hsp20
chr05_pseudomolecule_IMGAG_V2 27440272-27441277 F
EGN_Mt071002 20080227
Length = 142
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 42 SSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCKYLR 101
S+ +D +++P ++ ++VPG +K EI+V IE+ N L +R G ++ +D +
Sbjct: 27 STALLDWIESPTSHILKINVPGFNKDEIKVQIEEGNILHVRGEGVKEENLGKD--IVWHA 84
Query: 102 LERR-GPQNLLRKFRLPENANVSAITAKSENGVLTVVVEKLPPPQKSKTVEVAIA 155
ER G ++ R LPEN + I A ENGVLTV+V K P+ K + I
Sbjct: 85 AERGIGKRDFSRMIELPENVKLDQIKAHVENGVLTVLVPKDASPKSHKVRNINIT 139
>IMGA|CU459035_13.3 Heat shock protein Hsp20
chr05_pseudomolecule_IMGAG_V2 21518949-21519770 F
EGN_Mt071002 20080227
Length = 150
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 47 DILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCKYLRLERRG 106
D +TP+ ++F D+PG+ K E++V IE++ L I +G+RK + ED+ + R+ER
Sbjct: 46 DWKETPEAHIFKADLPGVKKEEVKVEIEEDRVLKI--SGERKIE-KEDKNDTWHRVER-S 101
Query: 107 PQNLLRKFRLPENANVSAITAKSENGVLTVVVEKL 141
+ LR+FRLPENA V + A ENGVLTV V K+
Sbjct: 102 QGSFLRRFRLPENAKVDEVKAGMENGVLTVSVPKV 136
>IMGA|CT009540_10.5 Heat shock protein Hsp20
chr03_pseudomolecule_IMGAG_V2 33883561-33882252 F
EGN_Mt071002 20080227
Length = 235
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 39 GGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCK 98
GG +P DI D E D+PGLSK +++V++E+ + LVI+S+ ++ ED
Sbjct: 128 GGEIRVPWDIKDEENEIKMRFDMPGLSKEDVKVSVEN-DVLVIKSDMHKEESGEEDS--- 183
Query: 99 YLRLERRGPQNLLRKFRLPENANVSAITAKSENGVLTVVVEKLPPPQKSKTVEV 152
R+ + + +LP+N + A+ +NGVL + V K +K V++
Sbjct: 184 ---WSRKSYSSYDTRLKLPDNCEKDKVKAELKNGVLYITVPKTKVERKVIDVQI 234
>IMGA|AC136973_20.4 Heat shock protein Hsp20
chr02_pseudomolecule_IMGAG_V2 15900393-15899869 H
EGN_Mt071002 20080227
Length = 174
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 34 NQENRGGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSE 93
N ++ G S+ +D +T ++F D+PG +K ++++ + + L I++ K + ++
Sbjct: 25 NSDSLGYESNTQMDWKETCDSHIFQFDLPGFTKEDLKLELHENRVLCIKAEKKPEEEEEN 84
Query: 94 DE-GCKYLRLERRGPQNLLRKFRLPENANVSAITAKSENGVLTVVVEK 140
+E K+ ER+ +++FRLPENA V + A +GVLT+ + K
Sbjct: 85 EEKSLKWHCKERKNNGVFMKEFRLPENAKVDDVKASMHDGVLTIKLVK 132
>IMGA|AC161403_41.4 Heat shock protein Hsp20
chr04_pseudomolecule_IMGAG_V2 24598600-24599959 E
EGN_Mt071002 20080227
Length = 113
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 35 QENRGGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSED 94
QEN VS+ +D +TP+ +VF D+PGL K E++V IED+ L I +G+R + ED
Sbjct: 44 QENSAFVST-RIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQI--SGERNVE-KED 99
Query: 95 EGCKYLRLER 104
+ ++ R+ER
Sbjct: 100 KNNQWHRVER 109
>IMGA|AC123572_6.4 Heat shock protein Hsp20
chr03_pseudomolecule_IMGAG_V2 24463724-24464768 F
EGN_Mt071002 20080227
Length = 221
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 45 PVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCK-YLRLE 103
P +I + EY D+PG++K +++V +E++ +V +K+ D ++E K Y R
Sbjct: 120 PWEIKEGESEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKAPKKKNDEDEEWSKSYGRYS 179
Query: 104 RRGPQNLLRKFRLPENANVSAITAKSENGVLTVVVEK 140
R LPEN I A+ ++GVL + + K
Sbjct: 180 SR--------IALPENVQFENIKAEVKDGVLYITIPK 208
>IMGA|AC147434_78.5 Heat shock protein Hsp20
chr05_pseudomolecule_IMGAG_V2 28885701-28889938 E
EGN_Mt071002 20080227
Length = 101
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 27 FPSRGHDNQENRGGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGK 86
FPS + +++ VD +T + +VF +D+PGL K E++V IED N L I S +
Sbjct: 30 FPSSARETT----ALANTRVDWKETQEAHVFSVDLPGLKKEEVKVEIEDGNVLQI-SGER 84
Query: 87 RKRQDSEDEGCKYLRLER 104
K Q+ +D+ K+ R+ER
Sbjct: 85 NKEQEEKDD--KWHRVER 100
>IMGA|AC151461_33.4 Heat shock protein Hsp20
chr07_pseudomolecule_IMGAG_V2 27388527-27387769 E
EGN_Mt071002 20080227
Length = 163
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 50 DTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCKYLRLERRGPQN 109
+T + +D PGL K ++++++E +NTL I+ G ++ ++ E+ G K+
Sbjct: 69 ETKDSLLLRLDTPGLGKEDVKISVE-QNTLTIKGEGAKESEEVEEGGRKFSS-------- 119
Query: 110 LLRKFRLPEN-ANVSAITAKSENGVLTVVVEKLPPPQKSKTVEVAI 154
+ LPE + I A+ +NGVL V+V K+ + + V V +
Sbjct: 120 ---RIDLPEKLYKIDQIKAEMKNGVLKVIVPKMKKEEMNNVVNVKV 162
>IMGA|AC139852_12.4 Heat shock protein Hsp20
chr07_pseudomolecule_IMGAG_V2 6656552-6655968 H
EGN_Mt071002 20080227
Length = 140
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 41 VSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQ 90
+S + VD +TP+ +V MDVPGL K EI++ +E EN+ V+R G+RK++
Sbjct: 65 LSPVKVDWKETPEGHVITMDVPGLRKDEIKIEVE-ENS-VLRVIGERKKE 112
>IMGA|AC146307_34.4 Heat shock protein Hsp20
chr06_pseudomolecule_IMGAG_V2 10367108-10366523 E
EGN_Mt071002 20080227
Length = 91
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 35 QENRGGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRS 83
QEN +S +D +TP+ +VF D+PGL K E++V IED+ L I +
Sbjct: 44 QEN-SAFASTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISA 91