Miyakogusa Predicted Gene

chr3.CM0996.130.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr3.CM0996.130.nd - phase: 0 
         (78 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC155884_16.4 seed maturation protein PM41  chr02_pseudomol...   141   7e-35

>IMGA|AC155884_16.4 seed maturation protein PM41
          chr02_pseudomolecule_IMGAG_V2 15313839-15313597 H
          EGN_Mt071002 20080227
          Length = 80

 Score =  141 bits (355), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 71/78 (91%), Positives = 73/78 (93%)

Query: 1  MSGAQGAQPKESLTATTYESVEGGANRTRTDLRSKEDQGSIQVDKLQEKVNDPAGKGGPV 60
          MSGAQGAQPKES TAT YES+EGG NRTRTDL SKEDQG IQVDKLQEKV+DPAGKGGPV
Sbjct: 1  MSGAQGAQPKESKTATIYESIEGGENRTRTDLFSKEDQGGIQVDKLQEKVHDPAGKGGPV 60

Query: 61 FGAGKDENKQDLGVTGTG 78
          FGAGKDENKQDLGVTGTG
Sbjct: 61 FGAGKDENKQDLGVTGTG 78