Miyakogusa Predicted Gene

chr3.CM0724.170.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr3.CM0724.170.nd + phase: 0 /partial
         (361 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|CR932961_12.4 Protein of unknown function DUF1296 chr05_pse...   107   1e-23
IMGA|CT573078_21.5 Protein of unknown function DUF1296 chr05_pse...    86   2e-17
IMGA|AC141106_8.5 Protein of unknown function DUF1296 chr04_pseu...    80   1e-15
IMGA|AC147496_46.4 Protein of unknown function DUF1296 chr03_pse...    59   2e-09

>IMGA|CR932961_12.4 Protein of unknown function DUF1296
          chr05_pseudomolecule_IMGAG_V2 23338265-23348727 E
          EGN_Mt071002 20080227
          Length = 868

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/80 (66%), Positives = 61/80 (76%), Gaps = 3/80 (3%)

Query: 10 GTGTNA-LSAKVRKTIQSIKEIVGNHSDADIYVALKETNMDPNETTQKLLNQDTFHEVKR 68
          G+G  A +   V+KTIQ+IKEI GNHSD DIY  LKE +MDPNETTQKLL QDTFHEVKR
Sbjct: 3  GSGFKASIPNSVKKTIQNIKEITGNHSDEDIYAMLKECSMDPNETTQKLLLQDTFHEVKR 62

Query: 69 RRDRKKETQNVENKVSAEPR 88
          ++DRKKE  N  N+   EPR
Sbjct: 63 KKDRKKEILN--NREHVEPR 80


>IMGA|CT573078_21.5 Protein of unknown function DUF1296
          chr05_pseudomolecule_IMGAG_V2 35411915-35419962 F
          EGN_Mt071002 20080227
          Length = 773

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 46/57 (80%), Gaps = 1/57 (1%)

Query: 20 VRKTIQSIKEIVG-NHSDADIYVALKETNMDPNETTQKLLNQDTFHEVKRRRDRKKE 75
          VRKTI  I+EI G  H+D +I+  LKE+NMDPNETTQKLL  DTFHEV+ RRDR+KE
Sbjct: 20 VRKTILDIREITGKQHTDDEIFSVLKESNMDPNETTQKLLYLDTFHEVRSRRDRRKE 76


>IMGA|AC141106_8.5 Protein of unknown function DUF1296
          chr04_pseudomolecule_IMGAG_V2 31190374-31197023 E
          EGN_Mt071002 20080227
          Length = 865

 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 5/74 (6%)

Query: 15 ALSAKVRKTIQSIKEIVGNHSDADIYVALKETNMDPNETTQKLLNQDTFHEVKRRRDRKK 74
           + A  RK +QS+KEIV N  D +IY  LK+ NMDPNE   +LL+QD FHEVK +R++KK
Sbjct: 17 GIPAASRKMVQSLKEIVSNIPDNEIYATLKDCNMDPNEAVSRLLSQDPFHEVKSKREKKK 76

Query: 75 ETQNVENKVSAEPR 88
               E K + EPR
Sbjct: 77 -----EGKDTTEPR 85


>IMGA|AC147496_46.4 Protein of unknown function DUF1296
          chr03_pseudomolecule_IMGAG_V2 9202297-9197408 E
          EGN_Mt071002 20080227
          Length = 528

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 42/57 (73%), Gaps = 1/57 (1%)

Query: 21 RKTIQSIKEIVGNHSDADIYVALKETNMDPNETTQKLLNQDTFHEVKRRRDRKKETQ 77
          +  + ++KEIV N ++ +IY  L+E +MDPN   +KLL+QDTF EV+ +R+++KE +
Sbjct: 28 KNVVAAVKEIV-NCTEQEIYDVLRECDMDPNLAVEKLLSQDTFREVRSKREKRKEMK 83