Miyakogusa Predicted Gene

chr3.CM0634.370.nd

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr3.CM0634.370.nd + phase: 0 
         (556 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC124215_22.4 Phosphoglycerate mutase, 2,3-bisphosphoglycer...  1001   0.0  

>IMGA|AC124215_22.4 Phosphoglycerate mutase,
           2,3-bisphosphoglycerate-independent
           chr07_pseudomolecule_IMGAG_V2 15316311-15321111 E
           EGN_Mt071002 20080227
          Length = 556

 Score = 1001 bits (2589), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/557 (86%), Positives = 517/557 (92%), Gaps = 4/557 (0%)

Query: 1   MGS---QWKLNDHPKLPKGKQIAMVVLDGWGEAKPNEYNCIHTAETPTMDSLKNGAPERW 57
           MGS    WKL DHPKLPKGK +A++VLDGWGEA  NEYNCIH AETPTMDSLK GAPE W
Sbjct: 1   MGSTDFSWKLPDHPKLPKGKTVAVIVLDGWGEANANEYNCIHNAETPTMDSLKQGAPEHW 60

Query: 58  RLVKAHGKAVGLPTDDDMGNSEVGHNALGAGRIYAQGAKLVDIALESGSIYEGEGFKYIK 117
           RLV+AHGKAVGLPT+DDMGNSEVGHNALGAGRI+AQGAKLVDIALE+G I+EG+GF YIK
Sbjct: 61  RLVRAHGKAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDIALETGKIFEGDGFNYIK 120

Query: 118 ECFETGTLHLLGLLSDGGVHSRLDQLQLLLKGVSERGVKRIRCHILTDGRDVLDGSSVAF 177
           E FETGTLHL+GLLSDGGVHSRLDQ+QLLLKG SERGVKR+R HILTDGRDVLDGSSV F
Sbjct: 121 ESFETGTLHLIGLLSDGGVHSRLDQVQLLLKGASERGVKRVRLHILTDGRDVLDGSSVGF 180

Query: 178 VETLEDDLAKLREKGIDARIASGGGRMNVTMDRYENDWSVVKRGWDAQVLGEASHKFTSA 237
           VETLE+DLAKLREKGIDA+IASGGGRMNVTMDRYENDW VVKRGWDAQVLGEA HKFT+A
Sbjct: 181 VETLENDLAKLREKGIDAQIASGGGRMNVTMDRYENDWGVVKRGWDAQVLGEAPHKFTNA 240

Query: 238 LEAVKTLRAEPKANDQYLPPFVIIDESGKPVGPIVDGDAVVTLNFRADRMVMIAKALEYE 297
           LEA+KTLRA PKANDQYLPPFVI+DESGK VGPIVDGDAVVT NFRADRM M+AKALEYE
Sbjct: 241 LEAIKTLRAAPKANDQYLPPFVIVDESGKSVGPIVDGDAVVTFNFRADRMTMLAKALEYE 300

Query: 298 NFDKFDRVRVPKIHYAGMLEYDGELKLPRHYLVSPPLIERTSGEYLVNNGIRIFACSETV 357
            FD FDRVRVPKI YAGMLEYDGELKLP+HYLVSPP I+RTSGEYLV NG+R FACSETV
Sbjct: 301 KFDNFDRVRVPKIRYAGMLEYDGELKLPKHYLVSPPEIDRTSGEYLVKNGVRTFACSETV 360

Query: 358 KFGHVTFFWNGNRSGYFNPAMEEYVEIPSDSGITFNVKPKMKAVEIAEKARDAILSKKFD 417
           KFGHVTFFWNGNRSGYF+  +EEYVEIPSDSGITFN +P MKA+EI EKARDAILS KFD
Sbjct: 361 KFGHVTFFWNGNRSGYFDEKLEEYVEIPSDSGITFNEQPLMKALEIGEKARDAILSGKFD 420

Query: 418 QVRVNLPNSDMVGHTGDIEATVVACKAADEAVKMILDAIEQVGGIYVVTADHGNAEDMVK 477
           Q+RVN+PN DMVGHTGDIEATVVACKAAD+AVKMILDAIEQVGGIYVVTADHGNAEDMVK
Sbjct: 421 QIRVNIPNGDMVGHTGDIEATVVACKAADKAVKMILDAIEQVGGIYVVTADHGNAEDMVK 480

Query: 478 RDKSGNPQLDKNGKIQILTSHTLEPVPLAIGGPGLSAGVRFRSDVPTGGLANVAATVINL 537
           RDK+G P L K+GK+QILTSHTLEPVP+AIGGPGL+ GVRFR+DVPTGGLANVAATV+NL
Sbjct: 481 RDKAGKPLL-KDGKVQILTSHTLEPVPIAIGGPGLTPGVRFRNDVPTGGLANVAATVMNL 539

Query: 538 HGFEAPSDYETTLIEVV 554
           HGFEAPSDYETTLIEVV
Sbjct: 540 HGFEAPSDYETTLIEVV 556