Miyakogusa Predicted Gene

chr3.CM0590.610.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr3.CM0590.610.nd - phase: 0 
         (347 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC126013_25.4 Protein of unknown function DUF761, plant chr...   229   1e-60
IMGA|AC144504_31.4 hypothetical protein chr07_pseudomolecule_IMG...    50   1e-06
IMGA|AC149268_29.5 hypothetical protein chr04_pseudomolecule_IMG...    49   3e-06

>IMGA|AC126013_25.4 Protein of unknown function DUF761, plant
           chr02_pseudomolecule_IMGAG_V2 18229046-18230196 H
           EGN_Mt071002 20080227
          Length = 306

 Score =  229 bits (585), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 169/354 (47%), Positives = 195/354 (55%), Gaps = 62/354 (17%)

Query: 1   MGFLSVKTVLISTGILSMAMGLKLTVPVVSNFIFTEAAPTLSTFFLTCFTPPYLYLLLNF 60
           M  LS+KT LIST ILS AM LKLTVP+VS+FI  EA PT+  F L+CFTPPYLYLLLN 
Sbjct: 1   MNSLSLKTALISTAILSTAMALKLTVPMVSHFILNEA-PTIWNFILSCFTPPYLYLLLNL 59

Query: 61  IILTIVATSKLHNHNN-SPPDTALLPTEPLIHAADVAAYGVHIPAPEPVKILENSQI-DY 118
           IILTIV TSK HNH++ SPP+T      P           V IP PE ++I E + + +Y
Sbjct: 60  IILTIVITSKFHNHHHHSPPET------PFDGIPSPVPVPVQIPVPETLQISETATLTNY 113

Query: 119 NGEMETTPVKFSGGFEMXXXXXXXXXXXXXXXAKTHAVIXXXXXXXXXXXXXXEEENLAP 178
           NG +     + S G+                     A +              E+     
Sbjct: 114 NGFVS----EASEGYRYELKTDETVAVSNESNDSV-AYVADEITPVKTTVVGVEDSVHVS 168

Query: 179 ILQRKESLEFAFNDENEKPPVSARFGHRKTVRSSPEGVTVVALGVTKPKRQETLESTWRT 238
            LQ+K  L+FAFNDENEKPP+SAR  HRKTVRSSPEG  V AL V K K+QETLESTW+T
Sbjct: 169 NLQKKVPLQFAFNDENEKPPISARSSHRKTVRSSPEGGKVNALRVAKTKKQETLESTWKT 228

Query: 239 ITEGRAMPLTRHLKKSETMETQPRRNAAPLADLN-------GPVMKKSETFGGREXXXXX 291
           ITEGRAMPL RHLKKSET E+QPRRN  PLADLN       GPVMKKS+TF G E     
Sbjct: 229 ITEGRAMPLNRHLKKSETFESQPRRNGVPLADLNGGVGGGSGPVMKKSDTFSGMEKSTSP 288

Query: 292 XXXXXXXXXXXLRKESSLSQDELNRRVEAFINKFNAEMRLQRQESLRQYKEMVN 345
                                                    RQESLRQY+EMVN
Sbjct: 289 -----------------------------------------RQESLRQYREMVN 301


>IMGA|AC144504_31.4 hypothetical protein
           chr07_pseudomolecule_IMGAG_V2 30093945-30093090 H
           EGN_Mt071002 20080227
          Length = 92

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/23 (100%), Positives = 23/23 (100%)

Query: 317 RVEAFINKFNAEMRLQRQESLRQ 339
           RVEAFINKFNAEMRLQRQESLRQ
Sbjct: 70  RVEAFINKFNAEMRLQRQESLRQ 92


>IMGA|AC149268_29.5 hypothetical protein
           chr04_pseudomolecule_IMGAG_V2 14543526-14543776 L
           EGN_Mt071002 20080227
          Length = 68

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/43 (55%), Positives = 29/43 (67%)

Query: 179 ILQRKESLEFAFNDENEKPPVSARFGHRKTVRSSPEGVTVVAL 221
           + +RK      FND+NEKP +SA+  H KTVRSSPEG  V AL
Sbjct: 9   VAKRKHRCSSRFNDDNEKPQISAKSSHWKTVRSSPEGGKVNAL 51