Miyakogusa Predicted Gene
- chr3.CM0590.560.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr3.CM0590.560.nd + phase: 0
(255 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC129091_3.5 Stem-specific protein TSJT1. , related chr02_... 339 5e-94
IMGA|CT573508_9.5 Asparagine synthase chr05_pseudomolecule_IMGAG... 55 4e-08
IMGA|CT967306_42.4 Asparagine synthase chr03_pseudomolecule_IMGA... 50 6e-07
>IMGA|AC129091_3.5 Stem-specific protein TSJT1. , related
chr02_pseudomolecule_IMGAG_V2 3996029-3987151 E
EGN_Mt071002 20080227
Length = 251
Score = 339 bits (870), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 163/252 (64%), Positives = 199/252 (78%), Gaps = 3/252 (1%)
Query: 1 MLAIFHKAFAHPPEELNSPASHNNGSNKPKPPQETLNQFISNHLHNSCTMSFGHAAVLAY 60
ML IF + + P+ELNSPAS N K KP E L F+S + N+ M+FG+ A+LAY
Sbjct: 1 MLGIFKEKLVNAPKELNSPAS--NSHTKAKPSHEILRDFMSCNSSNAFYMTFGNDALLAY 58
Query: 61 VRPDHPSSLHQRLFCGVDDIYCIFLGSLNNLSVLNKQYGLTKCTDEAMFVIEAYRTLRDR 120
P + S+HQRLF G+D+IYC F+G+L+NLS LNKQYGL+K +EAMF+IEAYRTLRDR
Sbjct: 59 -SPSNKPSIHQRLFSGLDNIYCAFMGNLHNLSQLNKQYGLSKGGNEAMFIIEAYRTLRDR 117
Query: 121 GPYPADQVVKDLDGSFAFVVYDSKVGTVFAALGSDGGVKLYWGIAADGSVVISDDLKVIK 180
GPYPADQV+K L+GSFAFV+YD K GTVFAA GSDG + LYWGIAADGSVVIS++L+++K
Sbjct: 118 GPYPADQVLKGLEGSFAFVIYDHKDGTVFAASGSDGHIGLYWGIAADGSVVISENLELVK 177
Query: 181 EGCAKSFAPFPTGCIFHSEGGLVSFEHPMHKLKAMPRIDSEGAMCGANFKVDKYARVNSI 240
CAKSFAPFPTGC+FHSE GL++FEHP K+KAMPRIDSEG MCGANF VD +R +
Sbjct: 178 ASCAKSFAPFPTGCLFHSEHGLLNFEHPTKKMKAMPRIDSEGVMCGANFNVDSQSRNQMM 237
Query: 241 PRVGSQSNWMEW 252
PRVGS++NW W
Sbjct: 238 PRVGSEANWATW 249
>IMGA|CT573508_9.5 Asparagine synthase chr05_pseudomolecule_IMGAG_V2
24261804-24256300 E EGN_Mt071002 20080227
Length = 569
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 23/180 (12%)
Query: 43 HLHNSCTMSFGHAAVLAYVRPDHPSSLHQRLFCGVDDIYCIFLGSLNNLSVLNKQ----- 97
H H C ++ A++ P+S Q LF + G + N L KQ
Sbjct: 25 HQHGDCFLAHQRLAIV------DPASGDQPLFNEDKSVIVTVNGEIYNHEALRKQLSNHT 78
Query: 98 YGLTKCTDEAMFVIEAYRTLRDRGPYPADQVVKDLDGSFAFVVYDSKVGTVFAALGSDGG 157
+ D + E Y + V LDG F+FV+ D++ + A + G
Sbjct: 79 FRTGSDCDVIAHLYEEY----------GEDFVDKLDGIFSFVLLDTRDNSYIVARDAIGV 128
Query: 158 VKLYWGIAADGSVVISDDLKVIKEGCAKSFAPFPTGCIFHS-EGGLVSFEHPMHKLKAMP 216
LY G DGSV IS ++K + + C + F FP G ++ S +GG + +P +A+P
Sbjct: 129 TSLYIGWGLDGSVWISSEMKALNDDC-EHFECFPPGHLYSSKDGGFRRWYNPPWYSEAIP 187
>IMGA|CT967306_42.4 Asparagine synthase
chr03_pseudomolecule_IMGAG_V2 25070617-25075109 E
EGN_Mt071002 20080227
Length = 570
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 126 DQVVKDLDGSFAFVVYDSKVGTVFAALGSDGGVKLYWGIAADGSVVISDDLKVIKEGCAK 185
++ V LDG F+FV+ D++ + AA + G LY G DGS+ + ++K + + C +
Sbjct: 111 EEFVDMLDGMFSFVLLDTRDKSFIAARDAIGITPLYLGWGHDGSIWFASEMKALIDDC-E 169
Query: 186 SFAPFPTGCIFHS-EGGLVSFEHP 208
F FP G I+ S +GGL + +P
Sbjct: 170 QFISFPPGHIYSSKQGGLRRWYNP 193