Miyakogusa Predicted Gene
- chr3.CM0452.200.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr3.CM0452.200.nd + phase: 0
(527 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC126784_9.5 hypothetical protein chr08_pseudomolecule_IMGA... 387 e-108
IMGA|AC126784_46.5 hypothetical protein chr08_pseudomolecule_IMG... 177 8e-45
IMGA|AC149474_36.4 hypothetical protein chr01_pseudomolecule_IMG... 158 6e-39
IMGA|AC149804_15.5 hypothetical protein chr06_pseudomolecule_IMG... 118 7e-27
IMGA|AC147482_16.4 hypothetical protein chr06_pseudomolecule_IMG... 108 4e-24
IMGA|AC152067_26.4 hypothetical protein chr08_pseudomolecule_IMG... 68 1e-11
IMGA|AC126784_37.5 hypothetical protein chr08_pseudomolecule_IMG... 50 2e-06
>IMGA|AC126784_9.5 hypothetical protein
chr08_pseudomolecule_IMGAG_V2 33492500-33496372 E
EGN_Mt071002 20080227
Length = 496
Score = 387 bits (994), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/472 (47%), Positives = 281/472 (59%), Gaps = 38/472 (8%)
Query: 62 LDEPSPLGLRLRKSPSLLDLIQMRLSQQHXXXXXXX------XXXXXXXXXXXXXXXXNF 115
L+EPSPLGL LRKSPSLLDLIQM L Q++ NF
Sbjct: 51 LNEPSPLGLSLRKSPSLLDLIQMTLCQENSVNANTANDNLNSKANKNGRASVEKLKASNF 110
Query: 116 PGTVLKIGTWEYKSRYEGDLVAKCYFAKHKLVWEVLDGCLKNKIEIPWSDIMALKANYPE 175
P T LKIG+WEYKS+YEGDLVAKCYFAK KLVWEVL+G LK+KIEI WSDI LKAN P+
Sbjct: 111 PATHLKIGSWEYKSKYEGDLVAKCYFAKQKLVWEVLEGELKSKIEIQWSDISQLKANCPD 170
Query: 176 DAPGTLEVVLARRPLFFREINPQPRKHTLWQATSDFTGGQASIQRRHFMQCPQGLLGKHF 235
D P TL +++AR+PLFFRE NPQPRKHTLWQ+T+DFTGGQASI RRH +QC QGLL KH+
Sbjct: 171 DGPSTLTLMVARQPLFFRETNPQPRKHTLWQSTTDFTGGQASIHRRHVLQCEQGLLIKHY 230
Query: 236 EKLIQCDPRLNFLSQQPELVLESPYFESGTAIHDHIESSDGFDSKSEEQPSLFGLHEVEX 295
EKL+QC+ RL FLSQQPE++++SP+F+ +A ++ + D ++ +
Sbjct: 231 EKLVQCNDRLKFLSQQPEIMVDSPHFDPRSAAIENPHNLKDCDLHQGNGSAVSCFQNMGS 290
Query: 296 XXXXXXXXXXXEHNLMGKAVENVSQEITSPSTVMNSHAIKDFRSRGAETLKFLSNLDQIK 355
EH+ A+ S +PS+ + + S+G+ N DQIK
Sbjct: 291 PHSSLSPSFTTEHS-DPSAITLDSVPCEAPSSSSEAMYNSEADSKGSR------NWDQIK 343
Query: 356 LPGLHPSMSMDDLVNHIGHCISTQMTSENSKFGGDS-QY-AMLEEFTQYLFNDSQLTPAS 413
LPGL PSMSM D + HI H IS +M S + F + +Y M++ TQ+L ND+Q+T S
Sbjct: 344 LPGLRPSMSMSDFLGHIEHHISKEMASGDPSFSAERLEYQQMMDGITQHLLNDNQVTTDS 403
Query: 414 DEKFVMSRVNSLYSLLQKDPPTA----EDKTMRHGNNVFDVNKVGEVGESNSTQTRLSPC 469
DEK +MSRVNSL LLQ DPP ++ G N VN + E NS
Sbjct: 404 DEKSLMSRVNSLRCLLQMDPPAVPNSHDNTGFIEGPNDAKVNIDIKATEENSR------- 456
Query: 470 KNKVIDLECQPDDASGSNQGIGMSRKESAGDLLHNLPRIASLPHFLFPMPED 521
D G N GMSRK+S GDLL +LPRIASLP FLF + ED
Sbjct: 457 ------------DVYGGNPAPGMSRKDSFGDLLLSLPRIASLPKFLFDISED 496
>IMGA|AC126784_46.5 hypothetical protein
chr08_pseudomolecule_IMGAG_V2 33505537-33507895 H
EGN_Mt071002 20080227
Length = 243
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 126/215 (58%), Gaps = 27/215 (12%)
Query: 60 NPLDEPSPLGLRLRKSPSLLDLIQMRLSQQHXXXXXX----XXXXXXXXXXXXXXXXXNF 115
N LDEPSPL L L KSPS LDLI+ L Q++ NF
Sbjct: 10 NILDEPSPLNLSLTKSPSFLDLIETELFQRNPVNANTGNLNSEVKKKSQASVEKLQASNF 69
Query: 116 PGTVLKIGTWEYKSRYEGDLVAKCYFAKHKLVWEVLDGCLKNKIEIPWSDIMALKANYPE 175
P T LKIG+W+Y+ +YEGDLVAK FAK K+VWEVL G LK+KIEI WSDI LKAN P
Sbjct: 70 PATRLKIGSWKYEPKYEGDLVAKFCFAKKKIVWEVLVGELKSKIEIQWSDITQLKANCPN 129
Query: 176 DAPGTLEVVLARRPLFFREINPQPRKHTLWQATSDFTGGQASIQRRHFMQCPQGLLGKHF 235
D P +L +V+AR+PLFFR + R HF++ QG L KHF
Sbjct: 130 DGPSSLSLVVARQPLFFRPTS-----------------------RWHFLKFEQGYLIKHF 166
Query: 236 EKLIQCDPRLNFLSQQPELVLESPYFESGTAIHDH 270
E+L+Q L FLS+QP+++L+SP+F++ +A ++
Sbjct: 167 EQLVQYSEHLKFLSEQPDIMLDSPHFDTRSAASEN 201
>IMGA|AC149474_36.4 hypothetical protein
chr01_pseudomolecule_IMGAG_V2 21068744-21067219 E
EGN_Mt071002 20080227
Length = 283
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 116/197 (58%), Gaps = 3/197 (1%)
Query: 67 PLGLRLRKSPSLLDLIQMRLSQQHXXXXXXXXXXXXXXXXXXXXXXXNFPGTVLKIGTWE 126
PLGL+L +P +L + ++ +FP +L IG ++
Sbjct: 42 PLGLKLTLTPEMLPFTEQNMNDD---TKITTSFQLEEIKKVEKLKAVHFPMYMLIIGFFK 98
Query: 127 YKSRYEGDLVAKCYFAKHKLVWEVLDGCLKNKIEIPWSDIMALKANYPEDAPGTLEVVLA 186
+++Y DLVAK Y+AK KLVWE+L LK KIEI W +I A++A ++ PG LE+ L
Sbjct: 99 IEAKYPADLVAKFYYAKRKLVWEILRDGLKEKIEIHWQNISAIRAVLEDNLPGILEIELD 158
Query: 187 RRPLFFREINPQPRKHTLWQATSDFTGGQASIQRRHFMQCPQGLLGKHFEKLIQCDPRLN 246
+ P FFREI P+P KHT+W + DFT GQAS RRH++Q P G L +++ KL+QCD RL
Sbjct: 159 KVPSFFREIEPKPGKHTVWTLSQDFTHGQASKYRRHYLQFPPGALDQYYAKLLQCDNRLM 218
Query: 247 FLSQQPELVLESPYFES 263
LSQ+P + YF+S
Sbjct: 219 ELSQRPFPSSHAIYFDS 235
>IMGA|AC149804_15.5 hypothetical protein
chr06_pseudomolecule_IMGAG_V2 2130217-2131593 H
EGN_Mt071002 20080227
Length = 210
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 94/149 (63%), Gaps = 11/149 (7%)
Query: 115 FPGTVLKIGTWEYKSRYEGDLVAKCYFAKHKLVWEVLDGC--LKNKIEIPWSDIMALKAN 172
F T+LKIG +E+KS+ E +LVA CYF K +W +LD +K KIEI W DI A++
Sbjct: 50 FLATMLKIGAFEFKSQNEVNLVAHCYFEHQKFLWGMLDKSTNIKYKIEIMWQDISAIRIV 109
Query: 173 YPEDAPGTLEVVLARRPLFFREINPQPRKHTLWQATSDFTGGQASIQRRHFMQCPQGLLG 232
E+ PG LE+ L ++P F+ IN + W+++ DFT G A+I RRH+++ P G+
Sbjct: 110 DEENKPGILEIELIKKPTFYHHINSK------WESSQDFTDGHAAIYRRHYLEFPPGV-- 161
Query: 233 KHFEKLIQCDPRLNFLSQQPELVLESPYF 261
+F+KL+Q + L LSQ+P L+S +F
Sbjct: 162 -NFKKLLQSNKHLLELSQRPFPSLDSSFF 189
>IMGA|AC147482_16.4 hypothetical protein
chr06_pseudomolecule_IMGAG_V2 2232340-2231130 H
EGN_Mt071002 20080227
Length = 226
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 90/149 (60%), Gaps = 11/149 (7%)
Query: 115 FPGTVLKIGTWEYKSRYEGDLVAKCYFAKHKLVWEVLDGC--LKNKIEIPWSDIMALKAN 172
F T+LKIG +E+ R E +LVA CYF K +W +LD +K KIEI W DI A++
Sbjct: 50 FLATLLKIGRFEFMPRNEVNLVAHCYFEHQKFLWGMLDKSTNIKYKIEIMWQDISAIRIV 109
Query: 173 YPEDAPGTLEVVLARRPLFFREINPQPRKHTLWQATSDFTGGQASIQRRHFMQCPQGLLG 232
+ PG LE+ L + P F+ IN ++W+++ DFT G A+I RRH+++ P +
Sbjct: 110 DEDKKPGILEIELIKVPTFYHHIN------SMWESSQDFTDGHAAICRRHYLEFPPKV-- 161
Query: 233 KHFEKLIQCDPRLNFLSQQPELVLESPYF 261
+F+KL+Q + L LSQ+P L+S +F
Sbjct: 162 -NFKKLLQSNKHLLELSQRPFPSLDSSFF 189
>IMGA|AC152067_26.4 hypothetical protein
chr08_pseudomolecule_IMGAG_V2 25807888-25807489 H
EGN_Mt071002 20080227
Length = 49
Score = 67.8 bits (164), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
Query: 184 VLARRPLFFREINPQPRKHTLWQATSDFTGGQASIQR--RHFMQCP 227
++AR+ LFFRE NPQPRKHT+WQ+T+DFT GQA+I R F CP
Sbjct: 1 MVARQSLFFRETNPQPRKHTMWQSTTDFTNGQANIHRYIYSFYSCP 46
>IMGA|AC126784_37.5 hypothetical protein
chr08_pseudomolecule_IMGAG_V2 33508583-33508759 H
EGN_Mt071002 20080227
Length = 58
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 27/40 (67%)
Query: 482 DASGSNQGIGMSRKESAGDLLHNLPRIASLPHFLFPMPED 521
D N GM RK+S GDLL NLPRIASLP FLF M +D
Sbjct: 19 DVYDDNLESGMFRKDSFGDLLFNLPRIASLPKFLFNMSQD 58