Miyakogusa Predicted Gene

chr3.CM0396.560.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr3.CM0396.560.nc + phase: 0 
         (539 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC126007_22.4 Protein of unknown function DUF966 chr04_pseu...   787   0.0  
IMGA|AC139841_13.4 Protein of unknown function DUF966 chr04_pseu...   217   1e-56
IMGA|AC155880_18.5 Protein of unknown function DUF966 chr02_pseu...    95   9e-20

>IMGA|AC126007_22.4 Protein of unknown function DUF966
           chr04_pseudomolecule_IMGAG_V2 13681474-13678274 E
           EGN_Mt071002 20080227
          Length = 514

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/515 (76%), Positives = 431/515 (83%), Gaps = 2/515 (0%)

Query: 1   MEARMKKYRQQVSPERAKVWTEKSPKYHQSLKVPVIYYLCRNRQLEHPHFMEVPLSSPDG 60
           ME RMKKYRQ VSP+RAKVWTEK+PKY  +LKVPVIYYLCRNRQLEHPHFMEVPLSSPDG
Sbjct: 1   MEGRMKKYRQ-VSPDRAKVWTEKAPKYQHNLKVPVIYYLCRNRQLEHPHFMEVPLSSPDG 59

Query: 61  LYLRDVIDRLNALRGRGMASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSEL 120
           LYLRDVID+LNALRGRGMASLYSWS KRSYK+GFVWHDL EDDLI PAHGNEYVLKGSEL
Sbjct: 60  LYLRDVIDKLNALRGRGMASLYSWSSKRSYKNGFVWHDLCEDDLIQPAHGNEYVLKGSEL 119

Query: 121 FDESNSDNFSPISNVKMQNVKLLPGPAXXXXXXXXXXXXXMNGKETRTSQEDELSQEPHT 180
           FDESNSD FSPI++VK+Q+VK+LPGP+             MNGKETR SQ+DE S E HT
Sbjct: 120 FDESNSDRFSPINDVKIQSVKMLPGPSSCRSHDEASSSSSMNGKETRYSQDDEQSHEQHT 179

Query: 181 GSSDVSPESRDEKSDSLSLALTEYKIYKTDGLADASTQTEEQVSRTRAQKTCTRGVSTED 240
           GSSDVSPESR EK+  LSLALTEYKIYK DGLADASTQTE+ ++R++ +K+CTRGVST+D
Sbjct: 180 GSSDVSPESRAEKTGPLSLALTEYKIYKADGLADASTQTEDSINRSKTRKSCTRGVSTDD 239

Query: 241 RSLEPECHEICQAEVPEVKDNPKMCKDTIYXXXXXXXXXXXXXKAETLESLIRADASKLS 300
            SL  ECHEICQ EVP+VK NP+ CKDTI              K ETLESLIRADASK +
Sbjct: 240 GSLISECHEICQTEVPQVKHNPETCKDTISPSPTTSSPLSFGGKMETLESLIRADASKAN 299

Query: 301 SFRTQEEEGARVPPTNTRLKASNLLMQLISCGSISVKNHSFGLIPSYKHRFSDSKFPSPL 360
           SFR  EEE   + PTNTRLKASNLLMQLISCGSISVKNHSFGLIPSYK RFS SKFPSPL
Sbjct: 300 SFRILEEEDIPM-PTNTRLKASNLLMQLISCGSISVKNHSFGLIPSYKPRFSHSKFPSPL 358

Query: 361 FSTSFMLGEFDCLAENPKLMNLRLEDKEYFSGSLIETKLKEGEAHKVLKRSSSYNDERTY 420
           FSTSF+LGE+DCL ENPKLMNLRLEDKEYFSGSLIETKLKEG+A  VLKRSSSYN+ERT 
Sbjct: 359 FSTSFVLGEYDCLVENPKLMNLRLEDKEYFSGSLIETKLKEGDARNVLKRSSSYNNERTN 418

Query: 421 KDQKPQEDKEETSSGHSKCIPRSIKASLTKHPRSESMKSPVSDGPRNSSDRFDXXXXXXX 480
           K+QKP+E++EE SSGHSKCIPRSIKASLTKHPR ESM+SP+S+GPR SSDR D       
Sbjct: 419 KEQKPKENEEEPSSGHSKCIPRSIKASLTKHPRGESMRSPISEGPRTSSDRIDGSCISAI 478

Query: 481 XXXXXXKRISEPSSGKKQSKRIDSFREEEVIKIEE 515
                 +RI+EPSSGKKQ KR+DSFRE EVIKIEE
Sbjct: 479 SSNSSSQRITEPSSGKKQPKRVDSFRENEVIKIEE 513


>IMGA|AC139841_13.4 Protein of unknown function DUF966
           chr04_pseudomolecule_IMGAG_V2 16308606-16312925 H
           EGN_Mt071002 20080227
          Length = 422

 Score =  217 bits (552), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 173/486 (35%), Positives = 233/486 (47%), Gaps = 88/486 (18%)

Query: 3   ARMKKYRQQVSPERAKVWTEKSPKYHQSLKVPVIYYLCRNRQLEHPHFMEVPLSSPDGLY 62
           +R +   ++ SPER KVWTE  PK  +  KV V+YYL RN  LEHPHFMEVPLSSP GLY
Sbjct: 7   SRGRPGTRETSPERTKVWTEPKPKTPR--KVSVVYYLSRNGHLEHPHFMEVPLSSPHGLY 64

Query: 63  LRDVIDRLNALRGRGMASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSELFD 122
           L+DVI RLN LRG+GM ++YSWS KRSYK+GFVWHDL+E D I P  G++Y+LKGSE+  
Sbjct: 65  LKDVIIRLNLLRGKGMPTMYSWSSKRSYKNGFVWHDLTESDFIYPTQGHDYILKGSEIL- 123

Query: 123 ESNSDNFSPISNVKMQNVKLLPGPAXXXXXXXXXXXXXMNGKETRTSQEDELSQEPHTGS 182
                                                     E  T+    L +E     
Sbjct: 124 ------------------------------------------EHETTARPPLEEE---SD 138

Query: 183 SDVSPESRDEKSDSLSLALTEYKIYKTDGL-----ADASTQTEEQVSRTRAQKTCTRGVS 237
           S V    R  +S S S+ L EY++YK++ L     ADASTQTEE+  R R  +       
Sbjct: 139 SPVVITRRRNQSWS-SIDLNEYRVYKSEPLGENIAADASTQTEEKRRRRRVLREEDEEQE 197

Query: 238 TEDRSLEPECHEICQAEVPEVKDNPKMCKDTIYXXXXXXXXXXXXXKAETLESLIRADAS 297
            E++    E     + E      + ++ ++ I                ETL +L++ D  
Sbjct: 198 EEEKEKNDEIEN--EGETENQNQSTELSREEI-------SPPPSDSSPETLGTLMKVDGR 248

Query: 298 KLSSFRTQEEEGARVPPT-NTRLKASNLLMQLISCGSISVKNHS---------FGLIPSY 347
                R+  +E   V    + R++AS++L+QL+SCG++S K  S         F L+  Y
Sbjct: 249 L--GLRSVPKENPTVESCPSGRMRASSVLLQLLSCGAVSFKEGSGASSGKDQRFSLVGHY 306

Query: 348 KHRFSDSKFPSPLFSTSFMLGEFDCLAENPKLMNLRLEDKEYFSGSLIETKLKEGEAHKV 407
           K R        P    + +  E   L E P L  +RLEDKEYFSGSLIETK  E  A K 
Sbjct: 307 KSRL-------PRGGGNHVGKEVGTLVEIPDLNRVRLEDKEYFSGSLIETKKVEAPAFKR 359

Query: 408 LKRSSSYNDERTYKDQKPQEDKEETSSGHSKCIPRSIKASLTKHPRSESMKSPVSDGPRN 467
               ++ +  R       Q  + E     +KCIPR  K  LTK     S         ++
Sbjct: 360 SSSYNADSSSRL------QIMEHEGDMVRAKCIPRKSKTLLTKKEEGTSSSMDSVSRSQH 413

Query: 468 SSDRFD 473
            S RF+
Sbjct: 414 GSKRFE 419


>IMGA|AC155880_18.5 Protein of unknown function DUF966
           chr02_pseudomolecule_IMGAG_V2 15078947-15075797 H
           EGN_Mt071002 20080227
          Length = 427

 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 1/90 (1%)

Query: 32  KVPVIYYLCR-NRQLEHPHFMEVPLSSPDGLYLRDVIDRLNALRGRGMASLYSWSCKRSY 90
           ++ +IY+L       EHPH + V   + +G+YLRD+   L  +RGR +   ++WS KR Y
Sbjct: 10  RLHIIYFLSHMGGHAEHPHLIRVLHLARNGVYLRDIKRWLGEVRGRDLPESFAWSYKRRY 69

Query: 91  KSGFVWHDLSEDDLILPAHGNEYVLKGSEL 120
           KSG+VW DL +DDLI P   NEYVLKGS++
Sbjct: 70  KSGYVWQDLMDDDLITPISDNEYVLKGSQI 99