Miyakogusa Predicted Gene
- chr3.CM0292.380.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr3.CM0292.380.nc + phase: 0
(576 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC144538_49.4 YT521-B-like protein chr04_pseudomolecule_IMG... 974 0.0
IMGA|AC152752_5.4 YT521-B-like protein chr04_pseudomolecule_IMGA... 372 e-103
IMGA|AC146774_15.4 YT521-B-like protein chr02_pseudomolecule_IMG... 306 2e-83
IMGA|AC167711_26.5 YT521-B-like protein chr07_pseudomolecule_IMG... 276 1e-74
IMGA|AC202520_15.3 YT521-B-like protein chr06_pseudomolecule_IMG... 269 2e-72
IMGA|AC140550_60.4 YT521-B-like protein chr02_pseudomolecule_IMG... 237 9e-63
>IMGA|AC144538_49.4 YT521-B-like protein
chr04_pseudomolecule_IMGAG_V2 1178306-1193216 E
EGN_Mt071002 20080227
Length = 571
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/571 (83%), Positives = 516/571 (90%), Gaps = 5/571 (0%)
Query: 7 FDNGNGEWDEYPSYVNSGGVELGSPGVYNENQSLVFHSGYGFNPQLPYGPYSPVTTPLPS 66
FDNGNGEWDEYPSYVN+GG+E+GSPGVYNENQSLVFHSGYGFNPQ+PYGPYSPVT+PLPS
Sbjct: 5 FDNGNGEWDEYPSYVNNGGIEIGSPGVYNENQSLVFHSGYGFNPQMPYGPYSPVTSPLPS 64
Query: 67 VGGDAQLYSHQQFPFTGPPYYHQLVPP-SLPYLNSPTPVSQPELTNLVGIDQQVDSMFFG 125
VGGDAQLYS QQFP+T PPYY+QLVPP +LPYLNSPTPVSQPELTNL+GIDQQV+S FFG
Sbjct: 65 VGGDAQLYSPQQFPYT-PPYYNQLVPPPNLPYLNSPTPVSQPELTNLLGIDQQVESNFFG 123
Query: 126 PRAGYPSVGSFGRGNFPVAPGSFNFHESQQGFDGSRSGGIWSDCSKPSERQRSLMPLSPS 185
PRA YPSVGSF RG+FPVAPGSF+FHESQQGFDGSRSGG+WSD SKPSERQRS MPLSPS
Sbjct: 124 PRASYPSVGSFARGSFPVAPGSFSFHESQQGFDGSRSGGLWSDSSKPSERQRSFMPLSPS 183
Query: 186 VSPQPIGSLGSFGLSAGMASHQQRPLYGFGSGSNSYGRGYHSNHGSSFGDAAIPSLGTND 245
V QPIGS+ SFG SAGMASHQQR LYGFGS SN YGRGY SN GSSFG +AI L ND
Sbjct: 184 VPQQPIGSVRSFGPSAGMASHQQRSLYGFGSSSNPYGRGYLSNPGSSFGGSAISGLSAND 243
Query: 246 RSFLSLENSRRQGRAAASLCKCNGALDILSEQNRGPRASKVKNQISAENNSVDSNKNNAS 305
RSFLSLENSRR GR AS C+CNG LDILSEQNRGPRASK+KN IS+ENN++D +KNNAS
Sbjct: 244 RSFLSLENSRRHGRETASFCRCNGTLDILSEQNRGPRASKLKNHISSENNAIDGSKNNAS 303
Query: 306 PAKFQDESFNQPDFATDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYCQA 365
AKFQDES N+PDFATD+KDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYCQA
Sbjct: 304 TAKFQDESLNRPDFATDFKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYCQA 363
Query: 366 KEKQDASPIFLFFSVNASAQFCGVAEMVGPVNFDKNVDFWQQDKWSGQFPVKWHMIKDVP 425
KEKQDA IFLFFSVNASAQFCGVAEMVGPVNFDK+VDFWQQDKWSGQFPVKWH+IKDVP
Sbjct: 364 KEKQDACRIFLFFSVNASAQFCGVAEMVGPVNFDKSVDFWQQDKWSGQFPVKWHIIKDVP 423
Query: 426 NSQFRHIVLENNDNKPVTNSRDTQEVKLQQGIEMLSIFKNYETDVSILDDFDFYEERQKA 485
NSQFRHIVLENNDNKPVTNSRDTQEVKLQQGIEML+IFKNYETD SILDDFDFYE+RQKA
Sbjct: 424 NSQFRHIVLENNDNKPVTNSRDTQEVKLQQGIEMLTIFKNYETDTSILDDFDFYEDRQKA 483
Query: 486 MQERKVRQQSSLVAAGLVGENEHRSSANSTNDFIKQLPKSFALVVRLDENNNKEITAANA 545
MQERK RQQSS++ GLVG +EHRSS++ST DFIKQ+ K+F+LVVRLD+NNN+ I A
Sbjct: 484 MQERKARQQSSIMPTGLVGGSEHRSSSDSTGDFIKQVSKNFSLVVRLDDNNNEVIA---A 540
Query: 546 NRDNLASDGLIGKVIKPEDVISVTASSTQTS 576
NRD LASD G V KP + I VTASS QTS
Sbjct: 541 NRDKLASDVPTGNVFKPGEGILVTASSMQTS 571
>IMGA|AC152752_5.4 YT521-B-like protein
chr04_pseudomolecule_IMGAG_V2 31295325-31291291 E
EGN_Mt071002 20080227
Length = 677
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/519 (42%), Positives = 306/519 (58%), Gaps = 57/519 (10%)
Query: 13 EWDEYPSYVNSGGVELGSPGVYNEN-QSLVFHSGYGFNPQLPYGPYSPVTTPLPSVGGDA 71
EW+ Y+N+ GV+L S GVY +N SLV+H GYG+ PY PYSP +P+P++G D
Sbjct: 91 EWE----YLNADGVDLTS-GVYGDNGSSLVYHHGYGY---APYAPYSPAGSPVPTMGNDG 142
Query: 72 QLYSHQQFPFTGPPYYHQLVPPSLPYLNSPTPVSQPELTNL--VGIDQQ---VDSMFFGP 126
QLY Q + + PP++ L P S P+ +PT + P+ N V DQ+ V++
Sbjct: 143 QLYGPQHYQY--PPFFQPLTPTSGPF--TPTSAAHPQGDNSTSVAADQKPLSVEAANGNT 198
Query: 127 RAGYPSVGSFGRGNFPVAPGSFNFHESQQGFDGSRSGGIWSDCSKPSERQRSLMPLSPSV 186
AG V + GR P S + + + GFDG+RS +W D S+ Q + +
Sbjct: 199 NAGTNGVNAKGR-----TPTSGGYQDPRYGFDGARSPNLWLDTPIFSDGQPRPVSSTVIS 253
Query: 187 SPQPIGSLGSFGL-------SAGMASHQQRPLYGFGSGSNSYGRGYHSNHGSSFGDAAIP 239
S G+ G+ S M H RP+ G+ R Y + +G++
Sbjct: 254 SSISSGNNGTASRNQTYRPNSQYMGLHHPRPIPAMGATPGFINRMYPNTRYGQYGNSVRS 313
Query: 240 SLG---------TNDRSFLSLENS-RRQGRAAASLCKCNGALDILSEQNRGPRASKVKNQ 289
+G TN R++L+++N + +GR N D L+E NRGPRA KNQ
Sbjct: 314 GMGYGTHGYDSRTNGRAWLAVDNKYKTRGRNGGYFGYGNENTDGLNELNRGPRAKGGKNQ 373
Query: 290 ---------ISAEN---NSVDSNK--NNASPAKFQDESFNQPDFATDYKDAKFFVIKSYS 335
+ +N N+VD K N+ +P + E +N+ DF +Y DAKFFVIKSYS
Sbjct: 374 KVFVPTVLTVKGQNVPVNTVDEEKEKNSTTPDR---EQYNKADFPEEYTDAKFFVIKSYS 430
Query: 336 EDNVHKSIKYGVWASTPNGNRKLDAAYCQAKEKQDASPIFLFFSVNASAQFCGVAEMVGP 395
ED++HKSIKY VWAST NGN+KLDAAY +A++K PIFL FSVN S QF G+AEM GP
Sbjct: 431 EDDIHKSIKYNVWASTQNGNKKLDAAYQEAQQKSGGCPIFLLFSVNTSGQFVGLAEMTGP 490
Query: 396 VNFDKNVDFWQQDKWSGQFPVKWHMIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLQQ 455
V+F+K++++WQQDKW G FP+KWH++KDVPN+ RHI LENN+NKPVTNSRDTQE+ L+
Sbjct: 491 VDFNKSLEYWQQDKWMGCFPLKWHIVKDVPNNVLRHITLENNENKPVTNSRDTQEIMLEP 550
Query: 456 GIEMLSIFKNYETDVSILDDFDFYEERQKAMQERKVRQQ 494
G+++L IFK Y + ILDDF FYE RQK + E+K +QQ
Sbjct: 551 GLKLLKIFKEYSSKTCILDDFGFYEGRQKTILEKKAKQQ 589
>IMGA|AC146774_15.4 YT521-B-like protein
chr02_pseudomolecule_IMGAG_V2 15989609-15984484 E
EGN_Mt071002 20080227
Length = 584
Score = 306 bits (783), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/251 (58%), Positives = 187/251 (74%), Gaps = 7/251 (2%)
Query: 248 FLSLENSRRQGRAAASLCKCNGAL-DILSEQNRGPRASKVKNQISAENNSVDSNKNNASP 306
F +++ + +G + K + D L+EQN+GPR + K +++ NS D + N +
Sbjct: 297 FPNMKATSTKGWVSTEKLKLRSKVNDSLNEQNQGPRTANAKGTLNSGGNSEDKSVNGNT- 355
Query: 307 AKFQDESFNQPDFATDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYCQAK 366
K + + +N PDF T Y A FFVIKSYSED+VHKSIKY VWASTPNGN++LD A+ A+
Sbjct: 356 -KIRTDQYNLPDFPTKYDHALFFVIKSYSEDDVHKSIKYDVWASTPNGNKRLDNAFQDAQ 414
Query: 367 ----EKQDASPIFLFFSVNASAQFCGVAEMVGPVNFDKNVDFWQQDKWSGQFPVKWHMIK 422
EK P+FLFFSVNAS QFCGVAEM+G V+F+K++DFWQQDKW+G FPVKWH+IK
Sbjct: 415 NRMEEKGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKSMDFWQQDKWNGYFPVKWHIIK 474
Query: 423 DVPNSQFRHIVLENNDNKPVTNSRDTQEVKLQQGIEMLSIFKNYETDVSILDDFDFYEER 482
D+PN Q RHI+LENND+KPVTNSRDTQE+ QGIEML+IFKNY + SILDDFDFYE R
Sbjct: 475 DIPNPQLRHIILENNDHKPVTNSRDTQEIHFPQGIEMLNIFKNYVSRTSILDDFDFYESR 534
Query: 483 QKAMQERKVRQ 493
QK MQE+K+RQ
Sbjct: 535 QKVMQEKKIRQ 545
>IMGA|AC167711_26.5 YT521-B-like protein
chr07_pseudomolecule_IMGAG_V2 21339285-21334340 E
EGN_Mt071002 20080227
Length = 662
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/362 (44%), Positives = 209/362 (57%), Gaps = 68/362 (18%)
Query: 221 YGRGYHSNHGSSFGDAAIPS-LGTNDRSFLSLEN------SRRQGRAAASLCKCNGALDI 273
YG + +N S +G +A S G+ D + + N SRR G D
Sbjct: 327 YGSSFRAN--SRYGSSAYGSRTGSFDNKYRATGNGYVANDSRRNG-------------DG 371
Query: 274 LSEQNRGPRASKVKNQISAENNSVDS----------------NKNNASPAKFQDESFNQP 317
SE N+GPRA+K S++N SV S + + P E +N
Sbjct: 372 FSELNKGPRAAK-----SSDNKSVKSPEPVTLLLKGQNLPVKSDDEVVPLVLNKEQYNGE 426
Query: 318 DFATDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYCQAKEKQDASPIFLF 377
D + +Y DAKFF+IKSYSED+VHKSIKY VWASTPNGN+KLDAAY +A PIFL
Sbjct: 427 DLSENYSDAKFFIIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEA----GGCPIFLL 482
Query: 378 FSVNASAQFCGVAEMVGPVNFDKNVDFWQQDKWSGQFPVKWHMIKDVPNSQFRHIVLENN 437
FSVN S QF G+AEM GPV+FDK V++WQQD+W+G F VKWH+IKD+PN RHI LENN
Sbjct: 483 FSVNTSGQFVGLAEMTGPVDFDKTVEYWQQDRWTGCFNVKWHIIKDIPNGVLRHITLENN 542
Query: 438 DNKPVTNSRDTQEVKLQQGIEMLSIFKNYETDVSILDDFDFYEERQKAMQERKVRQQSSL 497
+NKPVTNSRDTQEVK ++G++++ IFK + + SILDDF FYE R+K QERK ++Q
Sbjct: 543 ENKPVTNSRDTQEVKFEKGVQIVKIFKEHASKTSILDDFGFYESREKTTQERKFKEQ--- 599
Query: 498 VAAGLVGENEHRSSANSTNDFI---KQLPKSFALVVRLDENNNKEITAANANRDNLASDG 554
+ N +D LPKS LD KE A+A + N+ S+
Sbjct: 600 ---------QLPKQVNKASDITFGSVTLPKS------LDTTLMKESATADAAQGNVNSEV 644
Query: 555 LI 556
L+
Sbjct: 645 LL 646
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 14 WDEYPSYVN-SGGVELGSPGVYNENQSLVFHSGYGFNPQLPYGPYSPVTTPLPSVGGDAQ 72
W Y +YVN GG+ + GVY +N S ++H GYG+ PYG Y+ + P V D Q
Sbjct: 82 WSGYSNYVNLDGGM---TQGVYGDNCSYMYHQGYGYT---PYGAYASPNSSSPVVQHDGQ 135
Query: 73 LYSHQQFPFTGPPYYHQLVPPSLPYLNSPTPVSQPELTNLVGIDQ 117
+Y QQ+ + YY+ + + T V Q E++ V D+
Sbjct: 136 MYGLQQYQYPC-SYYNSPTSADGSFAPNKTSVPQREMSTAVNADR 179
>IMGA|AC202520_15.3 YT521-B-like protein
chr06_pseudomolecule_IMGAG_V2 5777103-5782215 E
EGN_Mt071002 20080227
Length = 663
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/247 (53%), Positives = 166/247 (67%), Gaps = 30/247 (12%)
Query: 271 LDILSEQNRGPRASKVKNQISAENNSVDSNKNNASPA----KFQD--------------- 311
+D E N+GPR S N+S D N + P K QD
Sbjct: 356 VDGFGELNKGPRGS---------NSSDDKNDKSLGPVTLLLKGQDLPIKSDDDKEVHPVP 406
Query: 312 --ESFNQPDFATDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYCQAKEKQ 369
+ + D + +Y DAKFFVIKSYSED++HKS+KY VW STPNGN+KLDAAY +AKEK
Sbjct: 407 DKQQYTGEDLSENYSDAKFFVIKSYSEDDIHKSMKYNVWTSTPNGNKKLDAAYLEAKEKS 466
Query: 370 DASPIFLFFSVNASAQFCGVAEMVGPVNFDKNVDFWQQDKWSGQFPVKWHMIKDVPNSQF 429
PIFL FSVN S QF G+AEMV PV+FD+ V++WQQD+W+G F VKW +IKD+PN+
Sbjct: 467 ADCPIFLLFSVNTSGQFVGLAEMVSPVDFDRTVEYWQQDRWTGCFSVKWRIIKDIPNNVL 526
Query: 430 RHIVLENNDNKPVTNSRDTQEVKLQQGIEMLSIFKNYETDVSILDDFDFYEERQKAMQER 489
RHI LENN+NKPVTNSRDTQEVK ++G+E+L IFK + + ILDDF FYE R+K +QE+
Sbjct: 527 RHITLENNENKPVTNSRDTQEVKFEKGVEILKIFKEHSSKTCILDDFAFYEAREKTIQEK 586
Query: 490 KVRQQSS 496
K ++Q S
Sbjct: 587 KAKEQLS 593
>IMGA|AC140550_60.4 YT521-B-like protein
chr02_pseudomolecule_IMGAG_V2 345137-338658 E
EGN_Mt071002 20080227
Length = 404
Score = 237 bits (605), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 143/184 (77%), Gaps = 4/184 (2%)
Query: 312 ESFNQPDFATDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYCQAKEKQDA 371
+ +N PDF T Y+ AKF++IKS++ED++HK IKY VW STP+GN+KL+AA+ A+ K
Sbjct: 160 DQYNLPDFQTKYETAKFYMIKSFNEDDIHKGIKYDVWTSTPHGNKKLNAAFQNAEAKLSQ 219
Query: 372 S----PIFLFFSVNASAQFCGVAEMVGPVNFDKNVDFWQQDKWSGQFPVKWHMIKDVPNS 427
+ PIFLFFSVNAS QF GVAEM+GPV+F K++ FW+ DK++G FP+KWH+IKDVPN
Sbjct: 220 TGTQCPIFLFFSVNASGQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWHIIKDVPNR 279
Query: 428 QFRHIVLENNDNKPVTNSRDTQEVKLQQGIEMLSIFKNYETDVSILDDFDFYEERQKAMQ 487
QF HI L+ N+NK VT SRDTQE+ L++G+EML IFK+Y S+LDDFDFYE R+K +
Sbjct: 280 QFAHITLQINENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFYENREKLCR 339
Query: 488 ERKV 491
++
Sbjct: 340 SQRT 343