Miyakogusa Predicted Gene
- chr3.CM0246.220.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr3.CM0246.220.nc - phase: 0 /partial
(915 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC149268_11.5 T6D22.1 , identical chr04_pseudomolecule_IMGA... 630 0.0
IMGA|AC149268_47.5 T6D22.1 chr04_pseudomolecule_IMGAG_V2 1447072... 366 e-101
IMGA|AC149268_51.5 T6D22.1 chr04_pseudomolecule_IMGAG_V2 1445433... 238 1e-62
IMGA|AC149268_49.5 CDS localized after complete sequencing of a ... 222 6e-58
IMGA|AC149268_50.5 CDS localized after complete sequencing of a ... 142 8e-34
>IMGA|AC149268_11.5 T6D22.1 , identical
chr04_pseudomolecule_IMGAG_V2 14466395-14460195 H
EGN_Mt071002 20080227
Length = 380
Score = 630 bits (1626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/348 (85%), Positives = 317/348 (91%), Gaps = 3/348 (0%)
Query: 265 VVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSASSFFATYDALCEEGT 324
+VVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSASSFFA YDALCEEGT
Sbjct: 19 MVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSASSFFAAYDALCEEGT 78
Query: 325 ATSVCKVLDEIADVSVPGSKDHVKAQGEILEGLVARLVSHESSNHIEKVLKEFPPPPADG 384
ATSVCK LDEIAD+SVPGSKDHVKAQGEILEGLVARLV+HESS IEK+L EFPPPPADG
Sbjct: 79 ATSVCKTLDEIADISVPGSKDHVKAQGEILEGLVARLVNHESSKQIEKILMEFPPPPADG 138
Query: 385 VALDFGPSLREICAANRSDEKQQIKALLESVGSSFCPDYSDWYGTDGADIHSRNVDRSVV 444
ALDFG SLREICAANRSDEKQQ+KALLE VGSSFCPDY+DW+GTD ADI SRN D+SV+
Sbjct: 139 AALDFGSSLREICAANRSDEKQQMKALLEGVGSSFCPDYADWFGTDAADIQSRNADKSVL 198
Query: 445 SKFLQAHPADYSTKKLQEIIRLMREKRFPAAFKCYHNFHKVDAISSDNVFYKMVIHVHSD 504
SKFLQAHPADYSTKKLQE++RL+REKR+PAAFKCYHNFHKVDAIS+D++FYKMVIHVHSD
Sbjct: 199 SKFLQAHPADYSTKKLQELVRLVREKRYPAAFKCYHNFHKVDAISNDDLFYKMVIHVHSD 258
Query: 505 SAFRRYQKEMRHRPGLWPLYRGFFVDINLFKANKEKAAEISMKXXXXXXXXXXXEKDDFA 564
S FRRYQKEMR+RPGLWPLYRGFFVDINLFKA+KEK AEIS K EKDDFA
Sbjct: 259 STFRRYQKEMRNRPGLWPLYRGFFVDINLFKADKEKVAEIS-KNSVNERGSSGTEKDDFA 317
Query: 565 DEDANLMVKLKFLTYKLRTFLIRNGLPVLFKEGQSAYKAYYLRQMKIW 612
DEDANLMVKLKFLTYKLRTFLIRNGL VLFKEG AYKAYYL Q IW
Sbjct: 318 DEDANLMVKLKFLTYKLRTFLIRNGLSVLFKEGPGAYKAYYLSQ--IW 363
>IMGA|AC149268_47.5 T6D22.1 chr04_pseudomolecule_IMGAG_V2
14470723-14467704 H EGN_Mt071002 20080227
Length = 288
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/265 (71%), Positives = 210/265 (79%), Gaps = 19/265 (7%)
Query: 13 QRSGG-HGGQQWKEEPKNEAPLSSTMGDSATGSETVSNKLAGMHIGENSEQTGLGHANK- 70
QRS G HG Q+WKE+PK E P S +GD+ ETV+NKL+ +HIGENS QT + + NK
Sbjct: 5 QRSSGLHGEQRWKEKPKTE-PQVSAIGDA----ETVTNKLSALHIGENSAQTKVQNVNKV 59
Query: 71 ------GAIWKPKSYGTTAA----TEVDNKPAGKVAVDGARVDATGVASPQKSSISSAGL 120
AIWKPKSYGT + TEV++ P K VDG + VAS QK S S L
Sbjct: 60 VNSQGSTAIWKPKSYGTVSGGANVTEVESTPVSKAKVDG--LGGVAVASTQKISSGSVAL 117
Query: 121 SKLFQGNLLEKFEVDNSTYSQAHIRATFYPKFENEKSDQETRTRMIEMVSKGLATLEVSL 180
SKLF GNLLE F VD+STY+QA IRATFYPKFENEKSDQETR+RMIE+VSKGL TLEVSL
Sbjct: 118 SKLFSGNLLENFTVDSSTYAQARIRATFYPKFENEKSDQETRSRMIELVSKGLLTLEVSL 177
Query: 181 KHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGTEASKKQAEFNNFLERN 240
KHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMF EAWGTEASKKQAEFN+FLE+N
Sbjct: 178 KHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFHEAWGTEASKKQAEFNDFLEKN 237
Query: 241 HMCISMELVTAVLGDHGQRPQEDFV 265
HMCISMELVTAVLGDHGQRP ED+V
Sbjct: 238 HMCISMELVTAVLGDHGQRPLEDYV 262
>IMGA|AC149268_51.5 T6D22.1 chr04_pseudomolecule_IMGAG_V2
14454339-14451003 E EGN_Mt071002 20080227
Length = 341
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/122 (90%), Positives = 120/122 (98%)
Query: 794 QIEDMCLRTKASAVPVVPESEGTDSNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGYV 853
QIEDMC RT+ASAVPVVPESEGTDSNPFSLDALAVF++RVLQRVNHPG+LDKASPNAGYV
Sbjct: 2 QIEDMCRRTRASAVPVVPESEGTDSNPFSLDALAVFVYRVLQRVNHPGSLDKASPNAGYV 61
Query: 854 LLMFYDLYDGESRKEFEGELIERFGSLVKMPLLKSDRNPLPEAVQCILKEGIDLFKLHSK 913
LLMFY LYDG+SRKEFEGELI+RFGSLVKMPLLK+DRNPLPEAVQCIL+EGIDL+KLH+K
Sbjct: 62 LLMFYHLYDGKSRKEFEGELIDRFGSLVKMPLLKNDRNPLPEAVQCILEEGIDLYKLHTK 121
Query: 914 RH 915
RH
Sbjct: 122 RH 123
>IMGA|AC149268_49.5 CDS localized after complete sequencing of a
cognate cDNA chr04_pseudomolecule_IMGAG_V2
14458776-14458277 H EGN_Mt071002 20080227
Length = 136
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/118 (91%), Positives = 114/118 (96%), Gaps = 1/118 (0%)
Query: 609 MKIWGTSPGKQKELSKMLDEWAVHIRRKCGNKQLSSSIYLSEAEPFLEQFAKRSPQNQAL 668
MKIWGTSPGKQKELSKMLDEWAV+IRRKCGNKQLSSSIYLSEAEPFLEQFAKRSPQNQAL
Sbjct: 1 MKIWGTSPGKQKELSKMLDEWAVYIRRKCGNKQLSSSIYLSEAEPFLEQFAKRSPQNQAL 60
Query: 669 IGSAGSLVRTEDFLAIVEEGQDEEGDLVAERDMAPSGPSISVKDTVPKNEGLIVFFPG 726
IGSAGSLVRTEDFLAIVE GQDEEGDL +ER +APS P+ISVKDTVPK+EG+IVFFPG
Sbjct: 61 IGSAGSLVRTEDFLAIVEGGQDEEGDLASER-VAPSEPNISVKDTVPKDEGMIVFFPG 117
>IMGA|AC149268_50.5 CDS localized after complete sequencing of a
cognate cDNA chr04_pseudomolecule_IMGAG_V2
14456990-14456153 H EGN_Mt071002 20080227
Length = 89
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 67/73 (91%), Positives = 69/73 (94%), Gaps = 1/73 (1%)
Query: 723 FFPGIPGCAKSALCKELLNAQGGL-GDDRPVHSLMGDLIKGKYWQKVAEERRKKPNSIML 781
PGIPGCAKSALCKELLNAQGGL GDDRPVHSLMGDLIKGKYWQKVAEER+KKP SIML
Sbjct: 10 LLPGIPGCAKSALCKELLNAQGGLLGDDRPVHSLMGDLIKGKYWQKVAEERKKKPKSIML 69
Query: 782 ADKNAPNKEVWRQ 794
ADKNAPN+EVWRQ
Sbjct: 70 ADKNAPNEEVWRQ 82