Miyakogusa Predicted Gene

chr3.CM0243.200.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr3.CM0243.200.nc - phase: 0 
         (221 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC174309_7.5 B-cell receptor-associated 31-like; Prefoldin ...   364   e-101
IMGA|AC157488_20.4 Prefoldin chr02_pseudomolecule_IMGAG_V2 20766...   237   3e-63
IMGA|CT963109_33.5 B-cell receptor-associated 31-like; Prefoldin...   105   1e-23
IMGA|CT963109_20.5 B-cell receptor-associated 31-like; Prefoldin...    88   2e-18

>IMGA|AC174309_7.5 B-cell receptor-associated 31-like; Prefoldin
           chr04_pseudomolecule_IMGAG_V2 11086807-11082013 F
           EGN_Mt071002 20080227
          Length = 221

 Score =  364 bits (934), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 181/220 (82%), Positives = 191/220 (86%)

Query: 1   MLQLLYTAIFSEMLLILTLVFKTPLRKLVIVSLDRVKRGRGPXXXXXXXXXXXXXXASSL 60
           MLQLLYTAIF EMLLILTLVFKTPLRKLVIVSLDRVKRGRGP              +SSL
Sbjct: 1   MLQLLYTAIFGEMLLILTLVFKTPLRKLVIVSLDRVKRGRGPIVVTTVGATLIVVLSSSL 60

Query: 61  YSMAKIQERTIEAGVLNPTDQVLFSKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLRKT 120
           YSMAKIQ+RT+EAGVLNPTDQVL SKH+LEASLMGFVLFLSLMIDRLHHYIRELRLLRKT
Sbjct: 61  YSMAKIQQRTVEAGVLNPTDQVLMSKHMLEASLMGFVLFLSLMIDRLHHYIRELRLLRKT 120

Query: 121 MEAVKKQSRSFDDDKNGNAEEHKALAEEIMALKSKVKKLESECEVKGNKAKTLETEVEAL 180
           MEAVKKQ+RSF+D KNG+ EE KAL EEI  LKSKVKKLESECE KG K KTLETEVEAL
Sbjct: 121 MEAVKKQTRSFEDGKNGSTEEQKALTEEITTLKSKVKKLESECEAKGTKEKTLETEVEAL 180

Query: 181 KKQSEGFLMEYDRLLEDNQNLRNQLNTIDHSTLNLDNKKS 220
           KKQSEGFLMEYDRLLEDNQNLR+QL  ID S+ +LDNKKS
Sbjct: 181 KKQSEGFLMEYDRLLEDNQNLRSQLEAIDQSSSHLDNKKS 220


>IMGA|AC157488_20.4 Prefoldin chr02_pseudomolecule_IMGAG_V2
           20766473-20765224 E EGN_Mt071002 20080227
          Length = 206

 Score =  237 bits (605), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 120/206 (58%), Positives = 152/206 (73%), Gaps = 1/206 (0%)

Query: 17  LTLVFKTPLRKLVIVSLDRVKRGRGPXXXXXXXXXXXXXXASSLYSMAKIQERTIEA-GV 75
           ++ +FKTPLR LVI++L++VKRGRGP               S+LY++ KIQ R+IE    
Sbjct: 1   MSFLFKTPLRNLVIITLNKVKRGRGPVIVKTVVGTVVTMLGSALYNIFKIQRRSIEGFAT 60

Query: 76  LNPTDQVLFSKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLRKTMEAVKKQSRSFDDDK 135
           ++ TDQVL S H+L+ASL+GFVLFLSLMIDRLHHYIRELRLLR  +E  KKQ+R F ++ 
Sbjct: 61  VDSTDQVLLSNHVLQASLLGFVLFLSLMIDRLHHYIRELRLLRNAVETGKKQNRCFQNNT 120

Query: 136 NGNAEEHKALAEEIMALKSKVKKLESECEVKGNKAKTLETEVEALKKQSEGFLMEYDRLL 195
           N  A EH +L EEI AL+ K++KLESECEVKG++ K+LE EVEA KKQSEGFLMEYD LL
Sbjct: 121 NIKAMEHTSLKEEIGALRFKIEKLESECEVKGSRVKSLEIEVEAFKKQSEGFLMEYDGLL 180

Query: 196 EDNQNLRNQLNTIDHSTLNLDNKKSM 221
            DNQNLR  L  I+  +  +D+K S+
Sbjct: 181 IDNQNLRKLLECIEKRSSYVDDKNSL 206


>IMGA|CT963109_33.5 B-cell receptor-associated 31-like; Prefoldin
           chr05_pseudomolecule_IMGAG_V2 34056126-34056879 H
           EGN_Mt071002 20080227
          Length = 120

 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/109 (46%), Positives = 71/109 (65%)

Query: 33  LDRVKRGRGPXXXXXXXXXXXXXXASSLYSMAKIQERTIEAGVLNPTDQVLFSKHLLEAS 92
           LD +KRGRGP               S++Y++ KI +R+++AG++NPT++VL + HLLEAS
Sbjct: 5   LDLLKRGRGPLIIKTIATTVFIVFGSTIYTILKIHKRSMDAGMVNPTEEVLMAHHLLEAS 64

Query: 93  LMGFVLFLSLMIDRLHHYIRELRLLRKTMEAVKKQSRSFDDDKNGNAEE 141
           LMGF LF  LMIDR H+YI+E+  LRK +E  KKQ  + +  K    EE
Sbjct: 65  LMGFSLFFGLMIDRQHYYIKEITSLRKNVEKSKKQIHNHEPPKRREIEE 113


>IMGA|CT963109_20.5 B-cell receptor-associated 31-like; Prefoldin
          , related chr05_pseudomolecule_IMGAG_V2
          34068558-34068893 H EGN_Mt071002 20080227
          Length = 111

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 64/95 (67%)

Query: 1  MLQLLYTAIFSEMLLILTLVFKTPLRKLVIVSLDRVKRGRGPXXXXXXXXXXXXXXASSL 60
          M+QLL+  +  E+ +IL L F  P+RKL++  LD +KRGRGP               S++
Sbjct: 1  MVQLLFALLSIELTVILILSFANPIRKLMVKVLDLLKRGRGPLIIKTIATTVFIVFGSTI 60

Query: 61 YSMAKIQERTIEAGVLNPTDQVLFSKHLLEASLMG 95
          Y++ KI +R+++AG++NPT++VL + HLLEASLMG
Sbjct: 61 YTILKIHKRSMDAGMVNPTEEVLMAHHLLEASLMG 95