Miyakogusa Predicted Gene
- chr2.LjT47G24.250.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr2.LjT47G24.250.nd - phase: 0
(151 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC155919_33.5 Peptide chain release factor eRF/aRF subunit ... 279 3e-76
IMGA|AC144344_31.5 Peptide chain release factor eRF/aRF subunit ... 279 3e-76
IMGA|AC136505_11.4 Peptide chain release factor eRF/aRF subunit ... 260 1e-70
IMGA|AC135505_28.5 Peptide chain release factor eRF/aRF subunit ... 258 7e-70
IMGA|AC155919_36.5 eRF1 domain 3 chr06_pseudomolecule_IMGAG_V2 1... 218 6e-58
IMGA|AC144344_29.5 eRF1 domain 3 chr06_pseudomolecule_IMGAG_V2 1... 218 6e-58
>IMGA|AC155919_33.5 Peptide chain release factor eRF/aRF subunit 1
chr06_pseudomolecule_IMGAG_V2 15045532-15050174 E
EGN_Mt071002 20080227
Length = 552
Score = 279 bits (714), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 127/145 (87%), Positives = 140/145 (96%)
Query: 1 MIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKH 60
+IGKYFEEISQDTGKYVFGVDDTL+AL+ GAVETLIVWENLDMNRYVLKN+ TGE+VIKH
Sbjct: 287 LIGKYFEEISQDTGKYVFGVDDTLQALDAGAVETLIVWENLDMNRYVLKNSTTGEVVIKH 346
Query: 61 YNKAEDADQSNFRDPESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRG 120
+NK ++A QSNFRDPE++ADYEVQEK SLL+WFANEYRRFGCTLEFVTNKSQEGSQFCRG
Sbjct: 347 FNKEQEAKQSNFRDPETAADYEVQEKTSLLDWFANEYRRFGCTLEFVTNKSQEGSQFCRG 406
Query: 121 FGGIGGILRYQLDMRSFDEFSDDGG 145
FGGIGGILRYQLDMR+FD+FSDDGG
Sbjct: 407 FGGIGGILRYQLDMRTFDDFSDDGG 431
>IMGA|AC144344_31.5 Peptide chain release factor eRF/aRF subunit 1
chr06_pseudomolecule_IMGAG_V2 14967487-14962845 E
EGN_Mt071002 20080227
Length = 552
Score = 279 bits (714), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 127/145 (87%), Positives = 140/145 (96%)
Query: 1 MIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKH 60
+IGKYFEEISQDTGKYVFGVDDTL+AL+ GAVETLIVWENLDMNRYVLKN+ TGE+VIKH
Sbjct: 287 LIGKYFEEISQDTGKYVFGVDDTLQALDAGAVETLIVWENLDMNRYVLKNSTTGEVVIKH 346
Query: 61 YNKAEDADQSNFRDPESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRG 120
+NK ++A QSNFRDPE++ADYEVQEK SLL+WFANEYRRFGCTLEFVTNKSQEGSQFCRG
Sbjct: 347 FNKEQEAKQSNFRDPETAADYEVQEKTSLLDWFANEYRRFGCTLEFVTNKSQEGSQFCRG 406
Query: 121 FGGIGGILRYQLDMRSFDEFSDDGG 145
FGGIGGILRYQLDMR+FD+FSDDGG
Sbjct: 407 FGGIGGILRYQLDMRTFDDFSDDGG 431
>IMGA|AC136505_11.4 Peptide chain release factor eRF/aRF subunit 1
chr07_pseudomolecule_IMGAG_V2 20975687-20972179 F
EGN_Mt071002 20080227
Length = 435
Score = 260 bits (665), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/151 (82%), Positives = 137/151 (90%), Gaps = 1/151 (0%)
Query: 1 MIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKH 60
+IGKYFEEISQ+TGKYV+GVDDTLKALEMGAVETLIVWENLD+ RYVLKN TGEIVIKH
Sbjct: 286 LIGKYFEEISQETGKYVYGVDDTLKALEMGAVETLIVWENLDITRYVLKNATTGEIVIKH 345
Query: 61 YNKAEDADQSNFRDPESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRG 120
K ++ DQSNFRD +SAD EVQEK+ LLEWFANEY+RFGC+LEFVTNKSQEGSQFCRG
Sbjct: 346 LKKGQENDQSNFRDVATSADLEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRG 405
Query: 121 FGGIGGILRYQLDMRSFDEFSDDGGVYEDSE 151
FGGIGG+LRYQLD+RSFDE SDD VYEDS+
Sbjct: 406 FGGIGGMLRYQLDIRSFDELSDD-EVYEDSD 435
>IMGA|AC135505_28.5 Peptide chain release factor eRF/aRF subunit 1
chr08_pseudomolecule_IMGAG_V2 22780485-22778424 E
EGN_Mt071002 20080227
Length = 549
Score = 258 bits (659), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 117/144 (81%), Positives = 135/144 (93%)
Query: 1 MIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKH 60
+I KYFEEI QDTGK V+GVDDTL+AL+ GAVETLIVWENLDM RYVLKN+ TGEIVIKH
Sbjct: 287 LIEKYFEEIGQDTGKSVYGVDDTLQALDAGAVETLIVWENLDMTRYVLKNSTTGEIVIKH 346
Query: 61 YNKAEDADQSNFRDPESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRG 120
+NK ++A+QSNFRDPE+S+DYEVQE LSL+EWFANEY++FGCTLE VTNKSQEGSQFC+G
Sbjct: 347 FNKQQEANQSNFRDPENSSDYEVQEMLSLVEWFANEYKQFGCTLEIVTNKSQEGSQFCKG 406
Query: 121 FGGIGGILRYQLDMRSFDEFSDDG 144
FGGIGG+LRYQLDMR+FD+FSDDG
Sbjct: 407 FGGIGGMLRYQLDMRTFDDFSDDG 430
>IMGA|AC155919_36.5 eRF1 domain 3 chr06_pseudomolecule_IMGAG_V2
15034444-15036293 E EGN_Mt071002 20080227
Length = 314
Score = 218 bits (556), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 110/144 (76%), Positives = 131/144 (90%)
Query: 1 MIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKH 60
+I KYF EI+Q+TGK+V GVDDTL+ L+ GAVETLIVWENLDM RYVLKN+ TGE+VIKH
Sbjct: 85 LIEKYFMEINQNTGKHVVGVDDTLQDLDAGAVETLIVWENLDMTRYVLKNSTTGEVVIKH 144
Query: 61 YNKAEDADQSNFRDPESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRG 120
+NK ++A++SNFRDPES+ADYEVQEK SLLEWFANEY++FGCTL VT++SQEGS FC+G
Sbjct: 145 FNKEQEANESNFRDPESAADYEVQEKQSLLEWFANEYKQFGCTLVIVTDESQEGSLFCKG 204
Query: 121 FGGIGGILRYQLDMRSFDEFSDDG 144
GGIGGILRYQLDM++FDEFSDDG
Sbjct: 205 LGGIGGILRYQLDMKTFDEFSDDG 228
>IMGA|AC144344_29.5 eRF1 domain 3 chr06_pseudomolecule_IMGAG_V2
14978570-14976721 E EGN_Mt071002 20080227
Length = 314
Score = 218 bits (556), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 110/144 (76%), Positives = 131/144 (90%)
Query: 1 MIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKH 60
+I KYF EI+Q+TGK+V GVDDTL+ L+ GAVETLIVWENLDM RYVLKN+ TGE+VIKH
Sbjct: 85 LIEKYFMEINQNTGKHVVGVDDTLQDLDAGAVETLIVWENLDMTRYVLKNSTTGEVVIKH 144
Query: 61 YNKAEDADQSNFRDPESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRG 120
+NK ++A++SNFRDPES+ADYEVQEK SLLEWFANEY++FGCTL VT++SQEGS FC+G
Sbjct: 145 FNKEQEANESNFRDPESAADYEVQEKQSLLEWFANEYKQFGCTLVIVTDESQEGSLFCKG 204
Query: 121 FGGIGGILRYQLDMRSFDEFSDDG 144
GGIGGILRYQLDM++FDEFSDDG
Sbjct: 205 LGGIGGILRYQLDMKTFDEFSDDG 228