Miyakogusa Predicted Gene
- chr2.LjT47E17.80.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr2.LjT47E17.80.nc - phase: 0
(1339 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC157472_42.4 CMP/dCMP deaminase, zinc-binding chr07_pseudo... 81 3e-15
IMGA|AC202367_16.4 CMP/dCMP deaminase, zinc-binding chr08_pseudo... 80 5e-15
IMGA|AC174332_32.5 CMP/dCMP deaminase, zinc-binding chr08_pseudo... 80 5e-15
IMGA|AC202580_7.3 CMP/dCMP deaminase, zinc-binding chr04_pseudom... 71 3e-12
IMGA|AC202493_24.4 CMP/dCMP deaminase, zinc-binding chr01_pseudo... 71 3e-12
IMGA|AC135565_46.5 CMP/dCMP deaminase, zinc-binding chr01_pseudo... 71 3e-12
IMGA|AC202493_5.4 CMP/dCMP deaminase, zinc-binding chr01_pseudom... 70 5e-12
IMGA|AC202493_21.4 CMP/dCMP deaminase, zinc-binding chr01_pseudo... 67 6e-11
IMGA|AC135565_43.5 CMP/dCMP deaminase, zinc-binding chr01_pseudo... 67 6e-11
>IMGA|AC157472_42.4 CMP/dCMP deaminase, zinc-binding
chr07_pseudomolecule_IMGAG_V2 22935506-22932677 E
EGN_Mt071002 20080227
Length = 169
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/121 (40%), Positives = 64/121 (52%), Gaps = 15/121 (12%)
Query: 1144 MNEALLEARKAADAWEVPVGAVLVQDGKIIARGCNLVEESRDSTAHAEMICIREASKLLH 1203
M A+ +A+ A A EVPVG V+V+DGK+IA G N E+R++T HAEM I LL
Sbjct: 1 MELAIQQAKLAMGALEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAI---DVLLE 57
Query: 1204 TW------------RLSETTLYVTLEPCPMCAGAILQARVDTVVWGAPNKLLGADGSWIR 1251
W + S +LYVT EPC MCA A+ + V +G N G GS +
Sbjct: 58 QWQKNGLSMTEVAKKFSNCSLYVTCEPCIMCASALSNLGIKEVFYGCSNDKFGGCGSILS 117
Query: 1252 L 1252
L
Sbjct: 118 L 118
>IMGA|AC202367_16.4 CMP/dCMP deaminase, zinc-binding
chr08_pseudomolecule_IMGAG_V2 30508549-30511787 F
EGN_Mt071002 20080227
Length = 186
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 1140 DEMFMNEALLEARKAADAWEV-PVGAVLVQDGKIIARGCNLVEESRDSTAHAEMICIREA 1198
D F+ A+ EA K D + P GAV+V + +++A N+V D TAHAE+ IREA
Sbjct: 31 DHKFLRRAVEEAYKGVDCGDGGPFGAVIVHNDEVVASCHNMVLNFTDPTAHAEVTAIREA 90
Query: 1199 SKLLHTWRLSETTLYVTLEPCPMCAGAILQARVDTVVWGA 1238
K L LS+ +Y + EPCPMC GAI +R+ +V+GA
Sbjct: 91 CKKLKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130
>IMGA|AC174332_32.5 CMP/dCMP deaminase, zinc-binding
chr08_pseudomolecule_IMGAG_V2 30462825-30466063 F
EGN_Mt071002 20080227
Length = 186
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 1140 DEMFMNEALLEARKAADAWEV-PVGAVLVQDGKIIARGCNLVEESRDSTAHAEMICIREA 1198
D F+ A+ EA K D + P GAV+V + +++A N+V D TAHAE+ IREA
Sbjct: 31 DHKFLRRAVEEAYKGVDCGDGGPFGAVIVHNDEVVASCHNMVLNFTDPTAHAEVTAIREA 90
Query: 1199 SKLLHTWRLSETTLYVTLEPCPMCAGAILQARVDTVVWGA 1238
K L LS+ +Y + EPCPMC GAI +R+ +V+GA
Sbjct: 91 CKKLKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130
>IMGA|AC202580_7.3 CMP/dCMP deaminase, zinc-binding
chr04_pseudomolecule_IMGAG_V2 9175488-9166607 E
EGN_Mt071002 20080227
Length = 159
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 1140 DEMFMNEALLEARKAADAWE-VPVGAVLVQ-DGKIIARGCNLVEESRDSTAHAEMICIRE 1197
D F+ +++ EA +A ++ + P GA++V+ D +++ N+V ++D TAHAE+ IRE
Sbjct: 15 DSKFIIKSVKEAYEAVESGDGYPYGALIVRNDHEVVVSTHNMVLRNKDPTAHAEITAIRE 74
Query: 1198 ASKLLHTWRLSETTLYVTLEPCPMCAGAI----LQARVDT 1233
A + L L++ LY + EPCPMC GAI ++ARVD
Sbjct: 75 ACQTLDRISLADCELYASCEPCPMCFGAIHFSDIKARVDA 114
>IMGA|AC202493_24.4 CMP/dCMP deaminase, zinc-binding
chr01_pseudomolecule_IMGAG_V2 19001243-18998749 E
EGN_Mt071002 20080227
Length = 159
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 1140 DEMFMNEALLEARKAADAWE-VPVGAVLVQ-DGKIIARGCNLVEESRDSTAHAEMICIRE 1197
D F+ +++ EA +A ++ + P GA++V+ D +++ N+V ++D TAHAE+ IRE
Sbjct: 15 DSKFIIKSVKEAYEAVESGDGYPYGALIVRNDHEVVVSTHNMVLRNKDPTAHAEITAIRE 74
Query: 1198 ASKLLHTWRLSETTLYVTLEPCPMCAGAI----LQARVDT 1233
A + L L++ LY + EPCPMC GAI ++ARVD
Sbjct: 75 ACQTLDRISLADCELYASCEPCPMCFGAIHFSDIKARVDA 114
>IMGA|AC135565_46.5 CMP/dCMP deaminase, zinc-binding
chr01_pseudomolecule_IMGAG_V2 18983002-18980508 E
EGN_Mt071002 20080227
Length = 159
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 1140 DEMFMNEALLEARKAADAWE-VPVGAVLVQ-DGKIIARGCNLVEESRDSTAHAEMICIRE 1197
D F+ +++ EA +A ++ + P GA++V+ D +++ N+V ++D TAHAE+ IRE
Sbjct: 15 DSKFIIKSVKEAYEAVESGDGYPYGALIVRNDHEVVVSTHNMVLRNKDPTAHAEITAIRE 74
Query: 1198 ASKLLHTWRLSETTLYVTLEPCPMCAGAI----LQARVDT 1233
A + L L++ LY + EPCPMC GAI ++ARVD
Sbjct: 75 ACQTLDRISLADCELYASCEPCPMCFGAIHFSDIKARVDA 114
>IMGA|AC202493_5.4 CMP/dCMP deaminase, zinc-binding
chr01_pseudomolecule_IMGAG_V2 19101742-19103595 E
EGN_Mt071002 20080227
Length = 203
Score = 70.5 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 1140 DEMFMNEALLEARKAADAWE-VPVGAVLVQDGKIIARGCNLVEESRDSTAHAEMICIREA 1198
D+ F+ +A+ EA K + + P GAV+V++ +++ N+V ++D TAHAE+ IREA
Sbjct: 16 DQKFITKAVEEAYKGVECGDGRPFGAVIVRNDEVVVSCHNMVLRNKDPTAHAEVTAIREA 75
Query: 1199 SKLLHTWRLSETTLYVTLEPCPMCAGAILQARV 1231
+ L L++ +Y + EPCPMC GAI +++
Sbjct: 76 CQKLDQIYLTDCEIYASCEPCPMCFGAINLSKI 108
>IMGA|AC202493_21.4 CMP/dCMP deaminase, zinc-binding
chr01_pseudomolecule_IMGAG_V2 19006658-19011545 E
EGN_Mt071002 20080227
Length = 128
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 1140 DEMFMNEALLEARKAADAWE-VPVGAVLVQDGKIIARGCNLVEESRDSTAHAEMICIREA 1198
D F+ +++ EA +A ++ + P GA++V++ ++I N+ +++ TAHAE+I IREA
Sbjct: 18 DSKFIIKSVKEAYEAVESGDGYPYGALIVRNDEVIVSCHNMFLRNKEPTAHAEIIAIREA 77
Query: 1199 SKLLHTWRLSETTLYVTLEPCPMCAGAILQARV 1231
K L L+ LY + EPCPMC GAI ++V
Sbjct: 78 CKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKV 110
>IMGA|AC135565_43.5 CMP/dCMP deaminase, zinc-binding
chr01_pseudomolecule_IMGAG_V2 18988417-18991404 H
EGN_Mt071002 20080227
Length = 128
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 1140 DEMFMNEALLEARKAADAWE-VPVGAVLVQDGKIIARGCNLVEESRDSTAHAEMICIREA 1198
D F+ +++ EA +A ++ + P GA++V++ ++I N+ +++ TAHAE+I IREA
Sbjct: 18 DSKFIIKSVKEAYEAVESGDGYPYGALIVRNDEVIVSCHNMFLRNKEPTAHAEIIAIREA 77
Query: 1199 SKLLHTWRLSETTLYVTLEPCPMCAGAILQARV 1231
K L L+ LY + EPCPMC GAI ++V
Sbjct: 78 CKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKV 110