Miyakogusa Predicted Gene
- chr2.LjT30P12.40.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr2.LjT30P12.40.nc - phase: 0
(195 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC174342_6.5 Oleosin chr06_pseudomolecule_IMGAG_V2 308113-3... 155 1e-38
IMGA|AC126785_8.4 Oleosin; Casein, alpha/beta chr05_pseudomolecu... 91 3e-19
IMGA|CR940307_16.5 Oleosin chr03_pseudomolecule_IMGAG_V2 3093489... 73 7e-14
IMGA|AC166707_17.4 Oleosin chr01_pseudomolecule_IMGAG_V2 2298070... 58 3e-09
>IMGA|AC174342_6.5 Oleosin chr06_pseudomolecule_IMGAG_V2
308113-307242 F EGN_Mt071002 20080227
Length = 193
Score = 155 bits (391), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 114/195 (58%), Gaps = 11/195 (5%)
Query: 1 MAQPQQQVHVHTTATHRYETGGANPPQRYEAGGINFNNQPQRYXXXXXX-FSSLFPERGP 59
MAQPQ V VHTTAT R G P Q+ + P + F+SLFPERGP
Sbjct: 1 MAQPQ--VQVHTTATTRTYETGTYPSQQQHLRSKEGVDYPYYHRSNDGGGFTSLFPERGP 58
Query: 60 SASQIIAVAAGVPXXXXXXXXXXXXXXXXXXXXXVFTPLLILFSPVIVPAVMTIGLAVAG 119
SASQI+A G+ + TPL ILFSPV++PA +TIGLAVAG
Sbjct: 59 SASQILASLGGLFLGGTLLLLASFSFFASLIGLAIMTPLFILFSPVLIPAALTIGLAVAG 118
Query: 120 ILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLDYAKNRMADMADY-------VGQKTKE 172
ILT+ A GLTGLMS SW YIR+ VP Q+D K RMAD+ DY VGQKTKE
Sbjct: 119 ILTADACGLTGLMSLSWTARYIRDLHAAVPGQMD-VKGRMADVVDYVGQKTKDVGQKTKE 177
Query: 173 VGHDIQTKAHEAKRT 187
VG DIQTKAHEAKRT
Sbjct: 178 VGQDIQTKAHEAKRT 192
>IMGA|AC126785_8.4 Oleosin; Casein, alpha/beta
chr05_pseudomolecule_IMGAG_V2 14141192-14140010 E
EGN_Mt071002 20080227
Length = 286
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 15/135 (11%)
Query: 27 QRYEAGGINFNNQPQRYXXXXXXFSSLFPERGPSASQIIAVAAGVPXXXXXXXXXXXXXX 86
QRYE GG+ ++ +R PS SQ++A+ G+
Sbjct: 15 QRYEGGGVTTHDSEKR---------------SPSTSQVLAIITGLHVGIILLALAGLYLL 59
Query: 87 XXXXXXXVFTPLLILFSPVIVPAVMTIGLAVAGILTSGAFGLTGLMSFSWLMNYIRETRG 146
V TPL +LFSPV++PA + GL V TS FGLT L FSW+MNYIR +G
Sbjct: 60 GTLTGVVVTTPLFVLFSPVLIPATIVTGLTVVSFFTSAIFGLTALSLFSWVMNYIRHAQG 119
Query: 147 IVPEQLDYAKNRMAD 161
+ E L+ K RM +
Sbjct: 120 TLQEHLELEKQRMVE 134
>IMGA|CR940307_16.5 Oleosin chr03_pseudomolecule_IMGAG_V2
30934891-30935786 F EGN_Mt071002 20080227
Length = 161
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%)
Query: 94 VFTPLLILFSPVIVPAVMTIGLAVAGILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLD 153
+ TPLL++FSP++VPA + + L G + SG G+ + + SW+ NY+ R + LD
Sbjct: 66 IATPLLVIFSPILVPAAIVLSLIAGGFMFSGGCGVAAIAALSWIYNYVSGNRPAGTDTLD 125
Query: 154 YAKNRMADMADYVGQKTKEVGHDIQTKAHEA 184
YAK + D A V ++ K+ G+ Q +A +A
Sbjct: 126 YAKGLITDKARDVKERAKDYGNYAQGRAQDA 156
>IMGA|AC166707_17.4 Oleosin chr01_pseudomolecule_IMGAG_V2
22980700-22981400 F EGN_Mt071002 20080227
Length = 149
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 94 VFTPLLILFSPVIVPAVMTIGLAVAGILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLD 153
+ TPL +LFSPV+VPAV+T+ L G SG FG+ + +W+ Y+ +QLD
Sbjct: 63 IATPLFLLFSPVLVPAVITVALLTLGFFVSGGFGVAAITVLAWIYRYVTGKHPPGADQLD 122
Query: 154 YAKNRMADMA 163
A++++ + A
Sbjct: 123 TARHKLMNKA 132