Miyakogusa Predicted Gene

chr2.CM0749.130.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr2.CM0749.130.nd + phase: 0 /partial
         (632 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC174294_25.4 Phosphoenolpyruvate carboxylase chr04_pseudom...   195   4e-50
IMGA|AC125474_10.5 Phosphoenolpyruvate carboxylase chr02_pseudom...   191   9e-49

>IMGA|AC174294_25.4 Phosphoenolpyruvate carboxylase
           chr04_pseudomolecule_IMGAG_V2 23013611-23007037 E
           EGN_Mt071002 20080227
          Length = 966

 Score =  195 bits (496), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 112/283 (39%), Positives = 173/283 (61%), Gaps = 16/283 (5%)

Query: 71  KQLASELSKMTLDEALMIARAFSHYLTLMGIAE----THHR----VRKGG----NVSIFA 118
           ++L + L+ +   ++++IA++FSH L L  +AE     + R    ++KG     N +I  
Sbjct: 77  EELGNMLTGLDAGDSIVIAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFGDENSAITE 136

Query: 119 KSCDDTFNLLV-QGGVSPDDLYNTVCKQEVEIVLTAHPTQINRRTLQFKHIKIAHLLDYN 177
              ++TF  LV Q   +P ++++ +  Q V++VLTAHPTQ  RR+L  KH ++   L   
Sbjct: 137 SDIEETFKRLVNQLKKTPLEVFDALKSQTVDLVLTAHPTQSVRRSLLQKHGRVRDCLTQL 196

Query: 178 DRPDLTHEDREMVIEDLVREITSIWQTDELRRQKPTPVDEARAGLNIVEQSLWKAVPRYL 237
              D+T +D++ + E L REI + ++TDE+RR  PTP DE RAG++   +++W  VP++L
Sbjct: 197 YAKDITPDDKQELDESLQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWNGVPKFL 256

Query: 238 RRVSNALKK-HTGKPLPLTSTPIKFGSWMGGDRDGNPNVTAKVTKDVSLLSRWMAIDLYV 296
           RR+  ALK     + +P  +  I+F SWMGGDRDGNP VT +VT+DV LL+R MA +LY 
Sbjct: 257 RRIDTALKNIGINERIPYNAPIIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYF 316

Query: 297 REVDSLRFELSMNRCSDELSRLAHEILEEANNENQ--CEHWNQ 337
            +++ L FELSM RC+DEL   A E+   A  + +   E W Q
Sbjct: 317 SQIEDLMFELSMWRCNDELRIRAEELHSSAKRDAKHYIEFWKQ 359



 Score =  144 bits (362), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 103/175 (58%)

Query: 458 QRPGIAPYRVVLGNVKDKXXXXXXXXXXXXXXGPCEHNPSDYFETKDQXXXXXXXXXXXX 517
           Q P   PYRV+LG+V+DK              G         F   +Q            
Sbjct: 359 QVPPTEPYRVILGDVRDKLYNTREHARQLLSDGSSAIPQEAIFTNVEQFLEPLELCYRSL 418

Query: 518 QSCGSGVLADGRLADLIRRVAIFGMVLMKLDLRQESTRHAETLDAITRYLDIGTYSEWDE 577
            +CG   +ADG L D +R+V+ FG+ L+KLD+RQES RH + +DAIT +L+IG+Y EW E
Sbjct: 419 CACGDQPIADGSLLDFLRQVSTFGLSLVKLDIRQESDRHTDVMDAITNHLEIGSYREWSE 478

Query: 578 EKKLDFLTKELKGKRPLVPYGIEVSPDVKEVLDTFQIAAELGSDSLGAYVISMAS 632
           E++ ++L  EL GKRPL    +  + ++ +VLDTF++ AEL SDS GAY+ISMA+
Sbjct: 479 ERRQEWLLSELSGKRPLFGPDLPKTEEIADVLDTFRVIAELPSDSFGAYIISMAT 533


>IMGA|AC125474_10.5 Phosphoenolpyruvate carboxylase
           chr02_pseudomolecule_IMGAG_V2 17526910-17521313 H
           EGN_Mt071002 20080227
          Length = 966

 Score =  191 bits (485), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 105/278 (37%), Positives = 169/278 (60%), Gaps = 13/278 (4%)

Query: 71  KQLASELSKMTLDEALMIARAFSHYLTLMGIAE----THHR---VRKG-----GNVSIFA 118
           ++L + ++     +++++A++FSH L L  +AE     H R   ++KG      N +  +
Sbjct: 76  EELGNLITSFDAGDSIVVAKSFSHMLNLANLAEEVQIAHRRRNKLKKGDFRDESNATTES 135

Query: 119 KSCDDTFNLLVQGGVSPDDLYNTVCKQEVEIVLTAHPTQINRRTLQFKHIKIAHLLDYND 178
              +    L+     SP ++++ +  Q V++VLTAHPTQ  RR+L  KH ++ + L    
Sbjct: 136 DIEETLKKLVFDMKKSPQEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRVRNCLSQLY 195

Query: 179 RPDLTHEDREMVIEDLVREITSIWQTDELRRQKPTPVDEARAGLNIVEQSLWKAVPRYLR 238
             D+T +D++ + E L REI + ++TDE++R  PTP DE RAG++   +++WK VP++LR
Sbjct: 196 AKDITPDDKQELDEALQREIQAAFRTDEIKRTPPTPQDEMRAGMSYFHETIWKGVPKFLR 255

Query: 239 RVSNALKK-HTGKPLPLTSTPIKFGSWMGGDRDGNPNVTAKVTKDVSLLSRWMAIDLYVR 297
           RV  ALK     + +P  +  I+F SWMGGDRDGNP VT +VT+DV LL+R MA +LY  
Sbjct: 256 RVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYS 315

Query: 298 EVDSLRFELSMNRCSDELSRLAHEILEEANNENQCEHW 335
           +++ L FELSM RC+DEL   A E+   +  +   +H+
Sbjct: 316 QIEDLMFELSMWRCNDELRVRAEELHRNSKKDEVAKHY 353



 Score =  144 bits (363), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 103/169 (60%)

Query: 464 PYRVVLGNVKDKXXXXXXXXXXXXXXGPCEHNPSDYFETKDQXXXXXXXXXXXXQSCGSG 523
           PYRVVLG V+DK              G  E      F   D+             +CG  
Sbjct: 365 PYRVVLGEVRDKLYRTRERSRYLLAHGYSEIPEEATFTNVDEFLEPLELCYRSLCACGDR 424

Query: 524 VLADGRLADLIRRVAIFGMVLMKLDLRQESTRHAETLDAITRYLDIGTYSEWDEEKKLDF 583
            +ADG L D +R+V+ FG+ L++LD+RQES RH + +DAIT++L+IG+Y EW EEK+ ++
Sbjct: 425 AIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITKHLEIGSYQEWSEEKRQEW 484

Query: 584 LTKELKGKRPLVPYGIEVSPDVKEVLDTFQIAAELGSDSLGAYVISMAS 632
           L  EL GKRPL    +  + ++++VLDTF++ AEL SD+ GAY+ISMA+
Sbjct: 485 LLSELIGKRPLFGPDLPQTDEIRDVLDTFRVIAELPSDNFGAYIISMAT 533