Miyakogusa Predicted Gene

chr2.CM0641.310.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr2.CM0641.310.nc + phase: 0 
         (1443 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|CT573505_18.4 Calcium-binding EF-hand chr05_pseudomolecule_...   643   0.0  

>IMGA|CT573505_18.4 Calcium-binding EF-hand
           chr05_pseudomolecule_IMGAG_V2 16895956-16905220 E
           EGN_Mt071002 20080227
          Length = 1489

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/616 (57%), Positives = 402/616 (65%), Gaps = 47/616 (7%)

Query: 399 VKLERTPVRSSKDPRGTSKDRR-------GSSLTKEGKSARRDSPHHSALHRHRSPVKEK 451
           V+LERTPVRSSKDPR TSKD R       GSSLTKEGKS+RRDSPH  ALHRHRSPVKEK
Sbjct: 396 VRLERTPVRSSKDPRSTSKDPRSTSKDPRGSSLTKEGKSSRRDSPHRGALHRHRSPVKEK 455

Query: 452 RREYICKVYPSRLVDIDRDYLSIDKRYPRLFVCPELSKVVVNWPRENLKLSIHTPISFEH 511
           RREY+CKVYPS LV+I+RDYLSIDKRYPRLF+ PE SK VV+WP+ENL LS+HTP+SFEH
Sbjct: 456 RREYVCKVYPSCLVNIERDYLSIDKRYPRLFISPEFSKAVVSWPKENLNLSLHTPVSFEH 515

Query: 512 DFVQEESAIEPRDTSTKLLNGQPPNSEQGNTVWNAKIILMSGLSRTALEDLSSDKIFDDR 571
           DFV+EESA   RD+S+KLL GQP  +EQGNTVWNAK+ILM+GLSR ALE+LS+DK+ DDR
Sbjct: 516 DFVEEESA---RDSSSKLLVGQPTGTEQGNTVWNAKVILMNGLSRGALEELSADKLLDDR 572

Query: 572 IPHICNFLRFAVLKKDHSFMAVGGPWEPADGGDPSNDDNSLIKTALRYAKDVTQLDLQKC 631
           IPH+CN LRF +LKKDHSFMAVGGPW PADGGDPSNDDNSLI+TALRY KD+ QLDLQKC
Sbjct: 573 IPHVCNILRFGILKKDHSFMAVGGPWGPADGGDPSNDDNSLIRTALRYTKDIIQLDLQKC 632

Query: 632 QHWNRFLEIHYDRFGKDGFFSHKEVTVLYVPDLSDCLPSLEEWRGQWLAHKKAVAEREHQ 691
           QHWNRFLE+HYDR GKDGFFSHKE+TVLYVPDLSDCLPSL++WR QWLAHKKAVAE+E  
Sbjct: 633 QHWNRFLEVHYDRIGKDGFFSHKEITVLYVPDLSDCLPSLDQWRDQWLAHKKAVAEKER- 691

Query: 692 LQLSLKKEKSRDNREXXXXXXXXXXXXGQSGVVKKEEKDSIIVKEETEEKPGVSNNNKIA 751
            Q++LKKEK+R  +E                  KK+EKD+  VKE  E+K GVS N  IA
Sbjct: 692 -QIALKKEKARAIKESNDKLGKKDSPASGKSNAKKKEKDN-TVKEGKEKKAGVSINT-IA 748

Query: 752 KVDASDIGEDKN-EKKLGETATGQITGSXXXXXXXXXXXXXXXXGAIKANDSATQQMDKS 810
           K DAS   E K+ EKK GET  GQ TGS                   K NDSA ++ DK 
Sbjct: 749 KNDASGTVEAKSAEKKPGETTPGQTTGSAKSVKKKIIKKIVKKV-VNKTNDSAKRETDKP 807

Query: 811 GVKDAAEEAAASDVPNQEDKSSVDPTRIHTS-------DVSXXXXXXXXXXXXXINSSGD 863
           G KD A++ A S+VP  E KSSVDPT + TS       D+              INS  D
Sbjct: 808 GEKDVADKVATSEVPVDEVKSSVDPTGVQTSGKDIVAEDIPIGKADGEGKNGKEINSIED 867

Query: 864 KPQDNPDSTVNAVTNDASXXXXXXXXXXXXXXXXXXXGEASKSAVSDPKNEGNVVEDKAV 923
                     N  TNDA+                   GEASK  V    NEGNVV  +A 
Sbjct: 868 ----------NTGTNDATVKTIKTRKIIKRVPKKKVVGEASKFVV----NEGNVVASQAQ 913

Query: 924 DSNQSTGKQTAAADAXXXXXXXXXXXXXXXXXXXXXSGKQGGAADSNKAETKSDKKDEGN 983
               ST KQTA AD                      SG Q  A   N          EGN
Sbjct: 914 AGADSTDKQTAEADTIETEGKKPAKVVTKRKLKTPTSGVQDDATVVN----------EGN 963

Query: 984 VVAIQAKDESESSGKQ 999
            VA+QA+D ++S GKQ
Sbjct: 964 TVAVQAQDGTDSPGKQ 979



 Score =  449 bits (1156), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/324 (71%), Positives = 249/324 (76%), Gaps = 26/324 (8%)

Query: 24  YGQNLGANYSGSSVGGHDVTQHSVASRHSAILGGQQEV-DVAGYR-----PAQYGGQYSS 77
           YGQNL ANYSG+S GGHD TQHS ASRHS ILG  Q+  DV  Y       AQYGGQYSS
Sbjct: 20  YGQNLSANYSGASAGGHDATQHSAASRHSGILGSSQDAADVGSYSRAHASVAQYGGQYSS 79

Query: 78  VYGSAALSSAPQVPSMSTKGA-ASSALDGRGGYS----DSPKFGPGDYIPSSSHGYGHKS 132
           VYGSAALS+APQ PS++ KGA +SSALD RG YS    DSPKF   DY+ SS+H YGHKS
Sbjct: 80  VYGSAALSTAPQAPSLTAKGAGSSSALDARGSYSLGVSDSPKFASSDYLSSSTHVYGHKS 139

Query: 133 DQLYGDKSLDYSGIDRRQYGERQSGYLGRDLPSEQTARYAADAVGYSGQHQQAEIYDRID 192
           DQLYGDKSLDYSG+DRRQYGERQSGY GRDL S+  +RYA DA GYS QHQ         
Sbjct: 140 DQLYGDKSLDYSGLDRRQYGERQSGYTGRDLASDPASRYATDAGGYSHQHQ--------- 190

Query: 193 QAALLRXXXXXXXXXXXXXXXX-GGTRQADYLAARTAASRHPTQDLMSYGGRMDSDPRAS 251
            A LLR                 G TRQ DYLAAR AASRHPTQDLMSYGGR+DSDP AS
Sbjct: 191 -ATLLRQEQLLKSQSLQAAASLDGATRQTDYLAARAAASRHPTQDLMSYGGRIDSDPHAS 249

Query: 252 SMLSATSYSGQHAPSILGAAPRRNVDDLLYSQNASNPGYGVSLPPGRDYATGKGLHGNSM 311
           SMLSATSYSGQHAPSILGAAPRRNVDDLLYSQNASNPGYGVSLPPGRDYA+GKG+HGN+M
Sbjct: 250 SMLSATSYSGQHAPSILGAAPRRNVDDLLYSQNASNPGYGVSLPPGRDYASGKGIHGNAM 309

Query: 312 ELDYPGNLLSQGGHNDRKDDRASY 335
           +LDYPG+LLS    +DRKDDRASY
Sbjct: 310 DLDYPGSLLS----HDRKDDRASY 329



 Score =  368 bits (945), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 251/548 (45%), Positives = 288/548 (52%), Gaps = 35/548 (6%)

Query: 913  NEGNVVEDKAVDSNQSTGKQTAAADAXXXXXXXXXXXXXXXXXXXXXSGKQGGAADSNKA 972
            NEGN V  +A D   S GKQTA  D                      SG Q  A  SNK 
Sbjct: 960  NEGNTVAVQAQDGTDSPGKQTADGDTTVTEGKKPAKVVTKRNLKTPTSGVQDDATGSNKK 1019

Query: 973  ETKS-DKKDEGNVVAIQAKDESESSGKQPPVADXXXXXXXXXXXXXXXXXXXXXXASEKQ 1031
              KS DK D+ N VA  A D+++S+ KQ   AD                       SEKQ
Sbjct: 1020 VAKSTDKTDDENAVAAPANDDTQSTDKQAANADTKIVSVAKKIVKVVPRKKLKVSTSEKQ 1079

Query: 1032 ----GTADSNKTEMKPD----KDDKGTGEKSGAKTDKQKTSEKSPQNVKEKQKDGDKSG- 1082
                G  DSNK EMK D    KD KGTGEKSG+K DK+KTSEK  Q V  K K G+KS  
Sbjct: 1080 EGARGAGDSNKNEMKSDNNDKKDGKGTGEKSGSKIDKKKTSEKDTQIVTGKLKVGEKSKD 1139

Query: 1083 EKVTKGRDGXXXXXXXXXXXXXXXXXXXXXXXXXGYILQTKGTXXXXXXXXXXXXXXXXX 1142
            EKVTK +DG                         G+ILQTK T                 
Sbjct: 1140 EKVTKEKDGKDEPKSKSSKEVKEKKKSDEPPRHPGFILQTKSTKDSKLRSLSLSLDSLLD 1199

Query: 1143 XXXXXVEESTLELSLFAESFNEMLQYQMGCRILTFLQKLRVKFVIXXXXXXXXXXXXXXX 1202
                 V+ESTLELSLFAESF EMLQ+QMG RILTFLQKLR KFV+               
Sbjct: 1200 YTDKDVDESTLELSLFAESFYEMLQFQMGSRILTFLQKLREKFVMKRAQRKRQREDGLDK 1259

Query: 1203 DNADKTPAKRPKGDDASVKTEATNTDTPNSTQAXXXXXXXXXXXXXXXXXXXXXXADENT 1262
            D+A+K+PAKR KGDD SVK+E T+ D  N TQA                        EN+
Sbjct: 1260 DSANKSPAKRKKGDDPSVKSE-TDVDASNPTQADNKKTVAEI---------------ENS 1303

Query: 1263 NPSEKENDLKMXXXX------XXXXXXXXXXXXXXXXXNGGPKHDASNDKDAEQEADLKV 1316
               E ++D+KM                           NG P+HD+SN K+AE   D   
Sbjct: 1304 GNKE-DDDVKMENASDDEDPEEEDPEEEPEEEPEEEMENGTPQHDSSNGKNAEH-VDANN 1361

Query: 1317 ESENVTSNEKAADETSKGEIVVKNEVKEAKTDVQ-SNXXXXXXXXXXXXTPAVKEVAVDK 1375
            ESEN TSNEKAADETSKGEI VK EV+E K D+Q               T AVKE  V+K
Sbjct: 1362 ESENATSNEKAADETSKGEIKVKEEVQELKDDIQLKEAKESKVDTVKKETRAVKEAVVNK 1421

Query: 1376 ELLQAFRFFDRNRAGYIRVEDMRLVLHNLGMFLSHRDVKDLVQSALLESNTGRDDRILYN 1435
            ELL+AFRFFDRNR GYIRVEDMR+++HNLGMFLSHRDVK+LVQSALLESNTGRDDRILY 
Sbjct: 1422 ELLKAFRFFDRNRVGYIRVEDMRIIIHNLGMFLSHRDVKELVQSALLESNTGRDDRILYI 1481

Query: 1436 KLARMSEL 1443
            KL RM+++
Sbjct: 1482 KLVRMADI 1489