Miyakogusa Predicted Gene

chr2.CM0249.1160.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr2.CM0249.1160.nc + phase: 0 
         (177 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|CT485798_10.5 Cytidylyltransferase chr05_pseudomolecule_IMG...   319   4e-88
IMGA|AC152421_15.5 Cytidylyltransferase chr08_pseudomolecule_IMG...   298   1e-81

>IMGA|CT485798_10.5 Cytidylyltransferase
           chr05_pseudomolecule_IMGAG_V2 7796083-7793015 F
           EGN_Mt071002 20080227
          Length = 175

 Score =  319 bits (818), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 155/174 (89%), Positives = 163/174 (93%)

Query: 1   MAVNDDPMVVPTLSPPNTYEAVVNGGTFDRLHDGHRLFLTASAQLARRRIVIGVCDGPML 60
           MAVNDDPMVVPTLSPPNTYEAVVNGGTFDRLHDGHRLFLT SAQLA+ RIVIGVCDGPML
Sbjct: 1   MAVNDDPMVVPTLSPPNTYEAVVNGGTFDRLHDGHRLFLTTSAQLAKHRIVIGVCDGPML 60

Query: 61  AKKQFAELIQPIEKRTHEVEAFIKSIKPDLEVQAVPITDPYGPSIVDENLEAVIVSKETL 120
           AKKQFAELI+PIE R H V+ FIKS+KP+LEVQAVPITDPYGPSI+DE LEAV+VSKETL
Sbjct: 61  AKKQFAELIEPIETRIHNVKTFIKSVKPELEVQAVPITDPYGPSIIDEKLEAVVVSKETL 120

Query: 121 PGGLAVNRKRVEKGLSQLKIEVVDLVSGESGGTKLSSSMLRKLEAEKAQKPSTI 174
           PGGLAVNRKR E+GLSQLKIEVVDLVSGESG  KLSSSMLRKLEAEKAQK STI
Sbjct: 121 PGGLAVNRKRAERGLSQLKIEVVDLVSGESGEIKLSSSMLRKLEAEKAQKQSTI 174


>IMGA|AC152421_15.5 Cytidylyltransferase
           chr08_pseudomolecule_IMGAG_V2 18326842-18323041 E
           EGN_Mt071002 20080227
          Length = 170

 Score =  298 bits (762), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 147/169 (86%), Positives = 156/169 (92%), Gaps = 1/169 (0%)

Query: 1   MAVNDDPMVVP-TLSPPNTYEAVVNGGTFDRLHDGHRLFLTASAQLARRRIVIGVCDGPM 59
           M VNDDPMVVP TLSPPNTYEAVVNGGTFDRLHDGHRLFLTASA LA+ RIVIGVCDGPM
Sbjct: 1   MTVNDDPMVVPPTLSPPNTYEAVVNGGTFDRLHDGHRLFLTASATLAKHRIVIGVCDGPM 60

Query: 60  LAKKQFAELIQPIEKRTHEVEAFIKSIKPDLEVQAVPITDPYGPSIVDENLEAVIVSKET 119
           LAKKQF+ELI+PIE R + V+ FIKS+KP+LEVQAVPITDPYGPSI+DE LEAVIVSKET
Sbjct: 61  LAKKQFSELIEPIETRMNNVKTFIKSVKPELEVQAVPITDPYGPSIIDEKLEAVIVSKET 120

Query: 120 LPGGLAVNRKRVEKGLSQLKIEVVDLVSGESGGTKLSSSMLRKLEAEKA 168
           LPGGLAVNRKR E+GLSQLKIEVVDLVSGESG  KLSSSMLRKLEAEK 
Sbjct: 121 LPGGLAVNRKRAERGLSQLKIEVVDLVSGESGEIKLSSSMLRKLEAEKG 169