Miyakogusa Predicted Gene

chr2.CM0081.230.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr2.CM0081.230.nc + phase: 0 
         (414 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC141109_38.5 Nucleotidyl transferase; Trimeric LpxA-like c...   807   0.0  
IMGA|CT963134_29.5 Glucose-1-phosphate adenylyltransferase, GlgD...   208   3e-54
IMGA|AC202496_4.4 Nucleotidyl transferase; Trimeric LpxA-like  c...    87   2e-17

>IMGA|AC141109_38.5 Nucleotidyl transferase; Trimeric LpxA-like
           chr04_pseudomolecule_IMGAG_V2 27108701-27102338 E
           EGN_Mt071002 20080227
          Length = 417

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/417 (93%), Positives = 402/417 (96%), Gaps = 3/417 (0%)

Query: 1   MEISEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMVHHPIYACKRIPNLAQIYL 60
           M+ SEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMVHHPI ACKRIPNLAQIYL
Sbjct: 1   MDSSEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMVHHPISACKRIPNLAQIYL 60

Query: 61  IGFHEEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYYFKDIIMEDSPSHIFLLNCD 120
           IGFHEEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYYF+DIIMEDSPSHIFLLNCD
Sbjct: 61  IGFHEEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYYFRDIIMEDSPSHIFLLNCD 120

Query: 121 VCCSFPLPSMLDAHIKYGGMGTMLVIKVSAESANQFGELVADPTTHELLHYTEKPETFVS 180
           VCCSFPLPSMLDAHIKYGGMGTMLVIKVSAESANQFGELVADP THELLHYTEKPETFVS
Sbjct: 121 VCCSFPLPSMLDAHIKYGGMGTMLVIKVSAESANQFGELVADPETHELLHYTEKPETFVS 180

Query: 181 DLINCGVYIFTPDIFTAIEDVSRIREGRGNLRRLSSFEALQSATRTLPADFVRLDQDILS 240
           DLINCGVYIFTPDIF AIEDVS  REGRGNLRRLSSFEALQSATRTLP DFVRLDQDILS
Sbjct: 181 DLINCGVYIFTPDIFAAIEDVSINREGRGNLRRLSSFEALQSATRTLPKDFVRLDQDILS 240

Query: 241 PLAGKKQLYTYETKDFWEQIKTPGMSLKCSELYLAQFRHTSPHLLASGDGKTNAKIVGDV 300
           PLAGKK+LYTYET DFWEQIKTPG+SLKCSELYLAQFR+TSPHLLASGDGK NAKIVGDV
Sbjct: 241 PLAGKKKLYTYETNDFWEQIKTPGLSLKCSELYLAQFRYTSPHLLASGDGKKNAKIVGDV 300

Query: 301 YIHPSAKVHPSAKIGPNVSISANVRVGSGVRLISCMILDDVEIKENAVVLNSIVGWKSSL 360
           YIHPSAKVHPSAKIGPNVSISANVRVG+GVRLI C++LDDVE+KENAVV+NSIVGWKSSL
Sbjct: 301 YIHPSAKVHPSAKIGPNVSISANVRVGAGVRLIGCIVLDDVEVKENAVVINSIVGWKSSL 360

Query: 361 GRWSRVQ---ADGDYNAKLGITILGEAVTVEDEIVVTNSIVLPHKTLNVSVQDEIIL 414
           GRWSRVQ   ADGDY+AKLGITILGEAVTVEDE+VV NSIVLPHK LNVSVQDEIIL
Sbjct: 361 GRWSRVQASLADGDYSAKLGITILGEAVTVEDEVVVINSIVLPHKILNVSVQDEIIL 417


>IMGA|CT963134_29.5 Glucose-1-phosphate adenylyltransferase, GlgD
           subunit chr03_pseudomolecule_IMGAG_V2 18469865-18465990
           F EGN_Mt071002 20080227
          Length = 361

 Score =  208 bits (529), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/407 (32%), Positives = 207/407 (50%), Gaps = 49/407 (12%)

Query: 9   AVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMVHHPIYACKRIPNLAQIYLIGFHEERE 68
           A+I+VGG   GTR RPL+ + PKPL   A +PM+ H I A K I     +  I +  E  
Sbjct: 3   ALILVGG--FGTRLRPLTLSVPKPLVDFANKPMILHQIEALKDIGVTEVVLAINYQPEVM 60

Query: 69  FALYVSSISNELKLPVRYLKEDKPHGSAGGLYYFKDIIMEDSPSHIFLLNCDVCCSFPLP 128
              ++     +L + +   +E +P G+AG L   +D +++ S    F+LN DV   +PL 
Sbjct: 61  LN-FLKDFEEKLDIKITCSQETEPLGTAGPLALARDKLIDGSGEPFFVLNSDVISEYPLK 119

Query: 129 SMLDAHIKYGGMGTMLVIKVSAESANQFGELVADPTTHELLHYTEKPETFVSDLINCGVY 188
            M+  H  +GG  +++V KV   S  ++G +V + TT ++  + EKP+ FV + IN G+Y
Sbjct: 120 EMIKFHKSHGGEASIMVTKVDEPS--KYGVVVMEETTGQVEKFVEKPKLFVGNKINAGIY 177

Query: 189 IFTPDIFTAIEDVSRIREGRGNLRRLSSFEALQSATRTLPADFVRLDQDILSPLAGKKQL 248
           +  P +   IE           LR  S                  +++++   +A  K+L
Sbjct: 178 LLNPSVLDHIE-----------LRPTS------------------IEKEVFPKIAANKKL 208

Query: 249 YTYETKDFWEQIKTPGMSLKCSELYLAQFRHTSPHLLASGDGKTNAKIVGDVYIHPSAKV 308
           Y      FW  I  P   +    LYL   R  +   LASG       I+G+V +H +AK+
Sbjct: 209 YAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKTSSKLASG-----PHILGNVIVHETAKI 263

Query: 309 HPSAKIGPNVSISANVRVGSGVRLISCMILDDVEIKENAVVLNSIVGWKSSLGRWSRVQA 368
                IGP+V+I     + SGVRL  C ++  V IK++A + +SI+GW S++G+W+RV+ 
Sbjct: 264 GEGCLIGPDVAIGPGCTIESGVRLSCCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE- 322

Query: 369 DGDYNAKLGITILGEAVTVEDEIVVTNSIVLPHKTLNVSVQD-EIIL 414
                    +TILGE V V DE+     +VLPHK +  S+ + EI++
Sbjct: 323 --------NMTILGEDVHVSDEVYSNGGVVLPHKEIKTSILNPEIVM 361


>IMGA|AC202496_4.4 Nucleotidyl transferase; Trimeric LpxA-like
           chr04_pseudomolecule_IMGAG_V2 27052696-27051830 E
           EGN_Mt071002 20080227
          Length = 50

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/47 (91%), Positives = 45/47 (95%)

Query: 368 ADGDYNAKLGITILGEAVTVEDEIVVTNSIVLPHKTLNVSVQDEIIL 414
           ADGDY+AKLGITILGEAVTVEDE+VV NSIVLPHK LNVSVQDEIIL
Sbjct: 4   ADGDYSAKLGITILGEAVTVEDEVVVINSIVLPHKILNVSVQDEIIL 50