Miyakogusa Predicted Gene

chr1.LjT29N14.30.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.LjT29N14.30.nd + phase: 0 
         (613 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|CU326387_13.4 Phosphoglucose isomerase (PGI) chr05_pseudomo...  1121   0.0  
IMGA|AC137080_15.4 Phosphoglucose isomerase (PGI) chr06_pseudomo...   141   6e-34
IMGA|AC167957_13.5 hypothetical protein chr01_pseudomolecule_IMG...    75   7e-14

>IMGA|CU326387_13.4 Phosphoglucose isomerase (PGI)
           chr05_pseudomolecule_IMGAG_V2 21793922-21803776 F
           EGN_Mt071002 20080227
          Length = 617

 Score = 1121 bits (2900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/618 (89%), Positives = 576/618 (93%), Gaps = 6/618 (0%)

Query: 1   MASISGICSSSPTLNKYQNQTPSSTSFSIRRRTHLLPTFPTRTKLPLTRSVAREAPA--D 58
           MASIS I SSSPTLN  +NQ  SS     R + HL P + TR KLP TRSVARE P   D
Sbjct: 1   MASISSIYSSSPTLNNQKNQNASSIPIRRRSQQHL-PIYQTRPKLPPTRSVAREIPTGTD 59

Query: 59  LSAV---TKHRLEKNPAALWQRYVDWLYQHKDLGLYIDVSRVGFTDEFLLEMEPRFQAAF 115
           LSAV     HRLEK+P ALW+RYVDWLYQHK++GLY+DVSRVGFTDEF+ EMEPRFQAA 
Sbjct: 60  LSAVQSTNHHRLEKDPRALWRRYVDWLYQHKEIGLYLDVSRVGFTDEFVKEMEPRFQAAL 119

Query: 116 RAMAELEKGAIANPDEGRMVGHYWLRDSTRAPNSFLKAKIDDTLDAICRFADDIVSGKIK 175
           +AM ELEKGAIANPDEGRMVGHYWLRDS RAPN FLK +ID TLDAIC FADDIVSGKIK
Sbjct: 120 KAMEELEKGAIANPDEGRMVGHYWLRDSNRAPNIFLKTQIDKTLDAICGFADDIVSGKIK 179

Query: 176 PPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGS 235
           PPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLG 
Sbjct: 180 PPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGP 239

Query: 236 ELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLSFPKQGVAITQENSLLDNTARIEGW 295
           ELASTLVIVISKSGGTPETRNGLLEVQKAFREAGL FPKQGVAITQENSLLDNTARIEGW
Sbjct: 240 ELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGW 299

Query: 296 LARFPMFDWVGGRTSEMSAVGLLPAALQSIDIREMIAGASLMDEATRSTVIRNNPAALLA 355
           LARFPMFDWVGGRTSEMSAVGLLPAALQ+IDIREM+ GASLMDEA RSTVIRNNPAALLA
Sbjct: 300 LARFPMFDWVGGRTSEMSAVGLLPAALQTIDIREMLLGASLMDEANRSTVIRNNPAALLA 359

Query: 356 LCWYWATDGVGSKDMVILPYKDSMLLFSRYLQQLVMESLGKEFDLDGNRVNQGLSVYGNK 415
           L WYWATDGVGSKDMVILPYKDS+LLFSRYLQQLVMESLGKE+DLDGNRVNQG+SVYGNK
Sbjct: 360 LSWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEYDLDGNRVNQGISVYGNK 419

Query: 416 GSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALY 475
           GSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALY
Sbjct: 420 GSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALY 479

Query: 476 ANDRESITVTVQEVTPRSVGALIALYERAVGIYASIVNINAYHQPGVEAGKKAAGEVLAL 535
           +NDRESITVTVQEVTPRSVGAL+ALYERAVGIYAS+VNINAYHQPGVEAGKKAAGEVLAL
Sbjct: 480 SNDRESITVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLAL 539

Query: 536 QKRVLTVLNEASCKEPVEPLTLEEVADRCHAPEDIEIIYKIIAHMAANDRALIAEGSCGS 595
           QKRVL VLNEASCKEPVEPLT+EEVA+RCHAPEDIE+IYKIIAHMAANDRALIAEG+CGS
Sbjct: 540 QKRVLAVLNEASCKEPVEPLTIEEVAERCHAPEDIEVIYKIIAHMAANDRALIAEGNCGS 599

Query: 596 PRSIKVFLGECNVDELYA 613
           PRS+KVFLGECNVDE+YA
Sbjct: 600 PRSVKVFLGECNVDEMYA 617


>IMGA|AC137080_15.4 Phosphoglucose isomerase (PGI)
           chr06_pseudomolecule_IMGAG_V2 1148709-1139527 F
           EGN_Mt071002 20080227
          Length = 568

 Score =  141 bits (356), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 220/486 (45%), Gaps = 52/486 (10%)

Query: 89  GLYIDVSRVGFTDEFLLEMEPRFQAAF--RAMAELEKGAIANPDEGRMVGHYWLRDSTRA 146
           G+ +D SR   T E   ++    +AA   + + ++  G   N  E R V H  LR    A
Sbjct: 47  GILLDYSRQQATLETTEKLFKLAEAASLKQKINQMYNGEHINSTENRAVLHVALRAPRDA 106

Query: 147 ----PNSFLKAKIDDTLDAICRFADDIVSGKIKPPSSPEGRFTQILSVGIGGSALGPQFV 202
                   +   + + LD I  F++ + SG     +  E     ++++GIGGS LGP FV
Sbjct: 107 VIESDGKNVVPDVWNVLDKIKEFSERVRSGSWVGATGKE--LKDVVAIGIGGSFLGPLFV 164

Query: 203 AEALAPDNPPLK------IRFIDNTDPAGIDHQIAQLGSELASTLVIVISKSGGTPETRN 256
             AL  +   ++      +RF+ N DP  +   I  L  E  +TLV+V+SK+  T ET  
Sbjct: 165 HTALQTEPEAIESARGRTLRFLANVDPIDVAKTITGLNPE--TTLVVVVSKTFTTAET-- 220

Query: 257 GLLEVQKAFREAGLSFPKQGVAITQENSLLDNTARIEGW----LARFPMFDWVGGRTSEM 312
             +   +  RE  +S            ++  N A +E +       F  +DWVGGR S  
Sbjct: 221 --MLNARTLREWIISALGPSAVAKHMVAVSTNLALVEKFGIDPNNAFAFWDWVGGRYSVC 278

Query: 313 SAVGLLPAALQ---SIDIREMIAGASLMDEATRSTVIRNNPAALLALCWYWATDGVGSKD 369
           SAVG+ P +LQ   S+ + + + GAS +D+   S    +N   LL L   W    +G   
Sbjct: 279 SAVGVFPLSLQYGFSV-VEKFLKGASSIDQHMHSEPFESNIPVLLGLLSVWNVSFLGYPA 337

Query: 370 MVILPYKDSMLLFSRYLQQLVMESLGKEFDLDGNRV--NQGLSVYGNKGSTDQHAYIQQL 427
             ILPY  ++  F+ ++QQ+ MES GK   +DG  +    G   +G  G+  QH++ Q +
Sbjct: 338 RAILPYTQALEKFAPHIQQVSMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLI 397

Query: 428 REGVHNFFATFIEVLRDRPP---------GHDWELEPGVTCGDYL-FG----MLQGTRSA 473
            +G       FI V++ + P          HD  +       D L +G     LQ    A
Sbjct: 398 HQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAYGKTPEQLQNENVA 456

Query: 474 -------LYANDRESITVTVQEVTPRSVGALIALYERAVGIYASIVNINAYHQPGVEAGK 526
                   +  +R S+++ +  +   +VG L+A+YE  + +   I  IN++ Q GVE GK
Sbjct: 457 PHLVSHKTFTGNRPSVSLLLPSLNAYNVGQLLAIYEHRIAVEGFIWGINSFDQWGVELGK 516

Query: 527 KAAGEV 532
             A +V
Sbjct: 517 SLATQV 522


>IMGA|AC167957_13.5 hypothetical protein
           chr01_pseudomolecule_IMGAG_V2 7024488-7024205 H
           EGN_Mt071002 20080227
          Length = 78

 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 16/78 (20%)

Query: 58  DLSAVTKHRLEKNPAALWQRYVDWLYQHKDLGLYIDVSRVGFTDEFLLEMEPRFQAAFRA 117
           DLS V     + +  ALW+ YVDWLYQHK++GLY+DVSR                A  +A
Sbjct: 2   DLSVVQSTNHQSDLHALWRCYVDWLYQHKEIGLYLDVSR----------------AELKA 45

Query: 118 MAELEKGAIANPDEGRMV 135
           M ELEKGAIANP E RMV
Sbjct: 46  MEELEKGAIANPGERRMV 63