Miyakogusa Predicted Gene

chr1.LjT14G19.110.nc

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.LjT14G19.110.nc - phase: 2 /partial
         (1988 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC173290_6.4 HEAT chr02_pseudomolecule_IMGAG_V2 663980-6576...    44   7e-04

>IMGA|AC173290_6.4 HEAT chr02_pseudomolecule_IMGAG_V2 663980-657621 E
            EGN_Mt071002 20080227
          Length = 865

 Score = 43.9 bits (102), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 67/172 (38%), Gaps = 9/172 (5%)

Query: 1524 DPDTSTVSVAWEALSRVIISVPKEVLPSYIKLVRDAISTSRDKERRKRKGGPILIPGFCL 1583
            D D +    A E +  + +++PK V P   +    +   +  K R        +I   CL
Sbjct: 127  DDDLAPDRAAAEVIDTMALNIPKHVFPPVFEFASVSCQNANPKFREASVTALGVISEGCL 186

Query: 1584 ---PKALQPILPIFLQGLISGSAELREQAALGLGELIEVTSEQ--SLKEFVIPITGPLIR 1638
                K L+PIL I L  L      +R  A+  LG+  E    +  S  E V+P     + 
Sbjct: 187  EQMKKKLEPILQIVLGALRDPEQMVRGAASFALGQFAEYLQPEIVSHYESVLPCILNALE 246

Query: 1639 IIGDRFPWQVKSAILSTLTIMIRKGGISLKPFLPQLQTTFVKCLQDSTRTIR 1690
               D    +VK      L       G  + PFL  L    +  LQ+S+R ++
Sbjct: 247  DASD----EVKEKSYYALAAFCENMGEEILPFLDPLMGRLLAALQNSSRILK 294