Miyakogusa Predicted Gene

chr1.LjT05B18.230.nd

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.LjT05B18.230.nd - phase: 0 /partial
         (373 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC174297_24.5 Kinesin, motor region; Zinc finger, RING-type...   185   3e-47
IMGA|CU019606_17.4 Kinesin, motor region; Zinc finger, RING-type...   185   3e-47

>IMGA|AC174297_24.5 Kinesin, motor region; Zinc finger, RING-type;
           tRNA-binding arm chr04_pseudomolecule_IMGAG_V2
           19026661-19038188 E EGN_Mt071002 20080227
          Length = 1072

 Score =  185 bits (469), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 152/381 (39%), Positives = 211/381 (55%), Gaps = 51/381 (13%)

Query: 7   DQIDLLREQHKILSGEMALHSSALKRLSEEAARNPQNGQIHVEMKRLKDEIKSKNEQIDL 66
           DQ+DLL EQ K+L+G++A  +S LKRL+E++  +P++ +  +E   L+ EI+ K  Q+  
Sbjct: 594 DQMDLLVEQVKMLAGDIAFSTSTLKRLTEQSVNDPESSRTQIE--NLEQEIQEKRNQLRG 651

Query: 67  LEKRISSHSFASDKTDQSGVS-----HTVAELIAQLNEKSFELEVKAADNRIIQEQLNQK 121
           LE+RI      S +T  +  S      TV  L+ Q NEK+FELE+K+ADNR++QEQLN K
Sbjct: 652 LEQRI----IESGQTSVANPSLVEMQQTVTRLMTQCNEKAFELEIKSADNRVLQEQLNSK 707

Query: 122 ICEFESLQETVASFKQQLADALELRNFNPVDNHLQHSSVTNNYHGELHLDKGNISNANEG 181
             E   LQE V   +QQLA           D       + +      H+D+         
Sbjct: 708 CSENRELQEKVKLLEQQLA----------TDTGGTSLLLADECASGEHIDELKRK----- 752

Query: 182 ILLQSQISEIEELNQKVAELTESKEQLEIRNRKLAEESTYAKGLASAAAVELKALSEEVA 241
             +QSQ  E E+L  +  +L+E    L ++N+KL+EE++YAK LASAAAVELK L+ EV 
Sbjct: 753 --IQSQEIENEKLKLEQVQLSEENSGLHVQNQKLSEEASYAKELASAAAVELKNLAGEVT 810

Query: 242 KLMNHNEKLAAELAASKNSPTQRRTSGTIQNG----------RRESHVKPRRNDQGGSN- 290
           KL   N KL  EL A++N    R       NG           R++ V  R N+  G   
Sbjct: 811 KLSLQNAKLEKELMAARNLANTRSAVTHTVNGVHRKYNDPRSGRKARVSSRANENVGPGR 870

Query: 291 ----------SDTKRELALSKEREQSYEAALLEKNQKEAELQRKVEESKQREAYLENELA 340
                      D K EL   K+RE + EAAL EK   E E + +VEE+K+RE+ LEN+LA
Sbjct: 871 DELESWSLEVDDLKMELQARKQREAALEAALAEKEIMEEEHRNRVEEAKKRESSLENDLA 930

Query: 341 NMWVLVAKLKKSHG--AETDV 359
           NMWVLVAKLKK  G  AE+++
Sbjct: 931 NMWVLVAKLKKEVGVVAESNI 951


>IMGA|CU019606_17.4 Kinesin, motor region; Zinc finger, RING-type;
           tRNA-binding arm chr03_pseudomolecule_IMGAG_V2
           33118746-33129814 E EGN_Mt071002 20080227
          Length = 1078

 Score =  185 bits (469), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 143/371 (38%), Positives = 202/371 (54%), Gaps = 45/371 (12%)

Query: 7   DQIDLLREQHKILSGEMALHSSALKRLSEEAARNPQNGQIHVEMKRLKDEIKSKNEQIDL 66
           DQ+DLL EQ K+L+G++A  +S LKRL E++  +P   +  +E   L+ EI+ K +Q+ L
Sbjct: 603 DQMDLLVEQVKMLAGDIAFSTSTLKRLIEQSVNDPDGSKSQIE--NLEREIQEKRKQMRL 660

Query: 67  LEKRISSHSFASDKTDQSGV--SHTVAELIAQLNEKSFELEVKAADNRIIQEQLNQKICE 124
           LE+R++  +  S   + S V    TV+ L  Q NEK+FELE+K+ADNR++QEQLN K  E
Sbjct: 661 LEQRLT-ETGESSMANSSLVEMQQTVSRLTTQCNEKAFELEIKSADNRVLQEQLNDKCSE 719

Query: 125 FESLQETVASFKQQLADALELRNFNPVDNHLQHSSVTNNYHGELHLDKGNISNANEGILL 184
              LQE +   +QQL  +          +       +  +  EL               +
Sbjct: 720 NRELQEKLKQLEQQLTASSS------GTSLSSEQCASGEHINELKKK------------I 761

Query: 185 QSQISEIEELNQKVAELTESKEQLEIRNRKLAEESTYAKGLASAAAVELKALSEEVAKLM 244
           QSQ  E E+L  +   L+E    L ++N+KL+EE++YAK LASAAAVELK L+ EV KL 
Sbjct: 762 QSQEIENEKLKLEQVHLSEDNSGLRVQNQKLSEEASYAKELASAAAVELKNLAGEVTKLS 821

Query: 245 NHNEKLAAELAASKNSPTQR----------RTSGTIQNGRRESHVKPRRNDQGGSN---- 290
             N KL  EL   ++    R          R     ++GR+   +  R ND  G+     
Sbjct: 822 LQNAKLEKELMTVRDLANSRVAVQMVNGVNRKYSDARSGRK-GRISSRANDLSGAGLDDF 880

Query: 291 -------SDTKRELALSKEREQSYEAALLEKNQKEAELQRKVEESKQREAYLENELANMW 343
                   D + EL   K+RE + E+AL EK   E E ++K EE+K+RE  LEN+LANMW
Sbjct: 881 DSWSLDADDLRLELQARKQREAALESALSEKEFVEEEFRKKAEEAKKREEALENDLANMW 940

Query: 344 VLVAKLKKSHG 354
           VLVAKLKK  G
Sbjct: 941 VLVAKLKKEGG 951