Miyakogusa Predicted Gene
- chr1.LjT04O06.50.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.LjT04O06.50.nc - phase: 0
(658 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC149809_34.4 GAT; ENTH/VHS chr07_pseudomolecule_IMGAG_V2 1... 263 2e-70
IMGA|AC153459_39.4 GAT; ENTH/VHS chr04_pseudomolecule_IMGAG_V2 3... 166 2e-41
IMGA|CT027663_23.5 GAT; ENTH/VHS chr05_pseudomolecule_IMGAG_V2 1... 129 5e-30
IMGA|AC174318_42.4 GAT; ENTH/VHS chr04_pseudomolecule_IMGAG_V2 2... 87 2e-17
IMGA|AC152156_2.4 GAT; ENTH/VHS chr04_pseudomolecule_IMGAG_V2 20... 87 2e-17
>IMGA|AC149809_34.4 GAT; ENTH/VHS chr07_pseudomolecule_IMGAG_V2
14932637-14938639 E EGN_Mt071002 20080227
Length = 731
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 191/268 (71%), Gaps = 3/268 (1%)
Query: 7 ERATSDMLIGPDWALNIEICDILNRDPAQSKDVVKGLKKRIGSRSSKVQLLALTLLETII 66
E+ATSD+L+GPDW +NIEICD +N + Q KDVVK +KKR+ RSSKVQ+LALTLLET++
Sbjct: 15 EKATSDLLMGPDWTMNIEICDSINSNHWQPKDVVKAVKKRLQHRSSKVQILALTLLETMV 74
Query: 67 KNCGDIVHMHVAERDVLHEMVKIVKKKPDPRVREKIMILIDTWQEAFGGXXXXXXXXXXX 126
KNCGD VH + +R +L EM+KIV+KK D +VR+KI+ L+D+WQEAFGG
Sbjct: 75 KNCGDYVHFQITDRHILEEMIKIVRKKADMQVRDKILALLDSWQEAFGGAGGKYPQYYWA 134
Query: 127 XXELLHSGAVFPQRSEQSAPVFTPLQTQP-LTSYPQNIRDSDAQPHTAESSAESEFPTLS 185
EL SG FP+RS +AP+FTP T P L + S ++ T + + +E +LS
Sbjct: 135 YDELKRSGVSFPKRSPDAAPIFTPPPTHPSLRQTGYGMPSSSSK--TLDETMATEIESLS 192
Query: 186 LSEIQNARGIMDVLAEMLSAIEPGNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTSDESL 245
+S +++ R ++D+L++ML A+ P ++ ++ EVIVDLV++CR+ +++++ ++ +T DE L
Sbjct: 193 MSSLESMRHVLDLLSDMLQAVNPNDRVAVKDEVIVDLVDRCRSNQKKLMQMLTTTGDEEL 252
Query: 246 LCQGLALNDDLQRVLAKHESIASGTPGQ 273
L +GL LND++Q +LA+H++IASG+ Q
Sbjct: 253 LGRGLELNDNIQSLLARHDAIASGSSFQ 280
>IMGA|AC153459_39.4 GAT; ENTH/VHS chr04_pseudomolecule_IMGAG_V2
34380583-34386521 E EGN_Mt071002 20080227
Length = 436
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 156/282 (55%), Gaps = 14/282 (4%)
Query: 1 MVNPLVERATSDMLIGPDWALNIEICDILNRDPAQSKDVVKGLKKRIGSRSSKVQLLALT 60
M LV ATS+ L DW NIEI +++ RD ++KDVVK +KKR+G+++ QL A+
Sbjct: 30 MAAELVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPNAQLYAVM 89
Query: 61 LLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDPRVREKIMILIDTWQEAFGGXXXXX 120
LLE ++ N GD ++ V +V+ +VKIVKKK D VRE+I +L+D Q + GG
Sbjct: 90 LLEMLMNNIGDHINEQVVRAEVIPILVKIVKKKSDLPVREQIFLLLDATQTSLGGASGKF 149
Query: 121 XXXXXXXXELLHSGAVFPQRSEQSAPVFTPLQTQPLTSYPQN-----IRDSDAQPHTAES 175
+L+ +G FPQR++ LQ + P+ R AQ + +
Sbjct: 150 PQYYKAYYDLVSAGVQFPQRAQVVQSNRPSLQPNTTNNVPKREPSPLRRGRVAQKAESNT 209
Query: 176 SAESEFPTLSLSEIQNARGIMDVLAEMLSAIEPGNKEGLRQEVIVDLVEQCRTYKQRVVH 235
ES IQ A +++VL E+L A++ + +G R E +DLVEQC KQRV+H
Sbjct: 210 VPESRI-------IQKASNVLEVLKEVLDAVDAKHPQGARDEFTLDLVEQCSFQKQRVMH 262
Query: 236 LVNSTSDESLLCQGLALNDDLQRVLAKHESIASG--TPGQNH 275
LV ++ DE ++ + + +N+ LQ+VL +H+ + S T NH
Sbjct: 263 LVMASRDERIVSRAIEVNEQLQKVLERHDDLLSSKDTTTVNH 304
>IMGA|CT027663_23.5 GAT; ENTH/VHS chr05_pseudomolecule_IMGAG_V2
1158167-1154103 F EGN_Mt071002 20080227
Length = 399
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 149/278 (53%), Gaps = 29/278 (10%)
Query: 2 VNPLVERATSDMLIGPDWALNIEICDILNRDPAQSKDVVKGLKKRIGSRSSKVQLLALTL 61
V+ LVE ATS+ PDWA+N+++CD++N + S ++++ +KKRI + +VQ LAL L
Sbjct: 48 VDKLVEDATSEAHEEPDWAMNLDLCDLINTEKVNSVELIRAIKKRIMIKIPRVQYLALVL 107
Query: 62 LETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDPRV----REKIMILIDTWQEAFGGXX 117
LET++KNC AER VL EMV+++ DP+ R K +++I+ W E+ G
Sbjct: 108 LETVVKNCEKAFSEVAAER-VLDEMVRVID---DPQTVVNNRNKALVMIEAWGES-TGEL 162
Query: 118 XXXXXXXXXXXELLHSGAVFPQRSEQS-APVFTPLQTQPLTSYP-------QNIRDSDAQ 169
L G FP R +S AP+FTP ++ + P Q +D Q
Sbjct: 163 RYLPVFEETYKSLRSRGIRFPGRDNESLAPIFTPPRSATVPEPPHVDDIPRQFQQDVPVQ 222
Query: 170 PHTAESSAESEFPTLSLSEIQNARGIMDVLAEMLSAIEPGNKEGLRQEVIVDLVEQCRTY 229
+T E + E+ AR +++L+ +LS+ ++ L+ ++ LV+QCR
Sbjct: 223 GYTEEQTKEA---------FDIARNSIELLSTVLSS--SPQQDVLQDDLTATLVQQCRRS 271
Query: 230 KQRVVHLVNSTSD-ESLLCQGLALNDDLQRVLAKHESI 266
+ V +V + D E++L + L +ND++ +VL K+E +
Sbjct: 272 QITVQRIVETAGDNEAILFEALNVNDEILKVLTKYEEL 309
>IMGA|AC174318_42.4 GAT; ENTH/VHS chr04_pseudomolecule_IMGAG_V2
21078530-21075814 E EGN_Mt071002 20080227
Length = 414
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 141/278 (50%), Gaps = 22/278 (7%)
Query: 5 LVERATSDMLIGPDWALNIEICDILNRDPAQSKDVVKGLKKRIGSRSSKVQLLALTLLET 64
LV ATS+ L P+W + + ICD++N + + DVV+ +KKRI +S + Q LAL LLE
Sbjct: 51 LVYEATSESLDEPNWDMILNICDMVNAEKLYTCDVVRAIKKRIMMKSVRGQYLALVLLEA 110
Query: 65 IIKNCGDIVHMHVAERDVLHEMVKIVKKKPDPRV---REKIMILIDTWQEAFGGXXXXXX 121
+++NC D VA VL EMVKIV PD +EK +++I W E+
Sbjct: 111 LVENC-DKGFFEVATERVLDEMVKIV-DDPDQSFVASKEKALMMIQVWGES-NTELRYLP 167
Query: 122 XXXXXXXELLHSGAVFPQR-SEQSAPVFT-------PLQTQPLTSYPQNIRDSD-AQPHT 172
L G FP R +E SAP+ T P L Q+ D + H
Sbjct: 168 VYEETYKSLKSRGIRFPGRNNESSAPILTHYHAPSAPEIDHSLGHLIQHDTQLDRSLAHL 227
Query: 173 AESSAESEFPTLSLSEIQNARGIMDVLAEMLSAIEPG--NKEGLRQEVIVDLVEQCRTYK 230
+ E+ P+L + + A + E+LS++ + L+Q++ + LV+QC
Sbjct: 228 IQR--ENPVPSLKPEQTKEAFDVARNSTELLSSVLSSSPQQNVLKQDLTITLVQQCHQ-S 284
Query: 231 QRVVHLVNST--SDESLLCQGLALNDDLQRVLAKHESI 266
Q VH + +T +E+LLC+ L +ND++ +VL+K+E +
Sbjct: 285 QSTVHRIIATVGENEALLCEALNVNDEIHKVLSKYEEL 322
>IMGA|AC152156_2.4 GAT; ENTH/VHS chr04_pseudomolecule_IMGAG_V2
20944874-20942158 E EGN_Mt071002 20080227
Length = 414
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 141/278 (50%), Gaps = 22/278 (7%)
Query: 5 LVERATSDMLIGPDWALNIEICDILNRDPAQSKDVVKGLKKRIGSRSSKVQLLALTLLET 64
LV ATS+ L P+W + + ICD++N + + DVV+ +KKRI +S + Q LAL LLE
Sbjct: 51 LVYEATSESLDEPNWDMILNICDMVNAEKLYTCDVVRAIKKRIMMKSVRGQYLALVLLEA 110
Query: 65 IIKNCGDIVHMHVAERDVLHEMVKIVKKKPDPRV---REKIMILIDTWQEAFGGXXXXXX 121
+++NC D VA VL EMVKIV PD +EK +++I W E+
Sbjct: 111 LVENC-DKGFFEVATERVLDEMVKIV-DDPDQSFVASKEKALMMIQVWGES-NTELRYLP 167
Query: 122 XXXXXXXELLHSGAVFPQR-SEQSAPVFT-------PLQTQPLTSYPQNIRDSD-AQPHT 172
L G FP R +E SAP+ T P L Q+ D + H
Sbjct: 168 VYEETYKSLKSRGIRFPGRNNESSAPILTHYHAPSAPEIDHSLGHLIQHDTQLDRSLAHL 227
Query: 173 AESSAESEFPTLSLSEIQNARGIMDVLAEMLSAIEPG--NKEGLRQEVIVDLVEQCRTYK 230
+ E+ P+L + + A + E+LS++ + L+Q++ + LV+QC
Sbjct: 228 IQR--ENPVPSLKPEQTKEAFDVARNSTELLSSVLSSSPQQNVLKQDLTITLVQQCHQ-S 284
Query: 231 QRVVHLVNST--SDESLLCQGLALNDDLQRVLAKHESI 266
Q VH + +T +E+LLC+ L +ND++ +VL+K+E +
Sbjct: 285 QSTVHRIIATVGENEALLCEALNVNDEIHKVLSKYEEL 322