Miyakogusa Predicted Gene

chr1.CM1956.620.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.CM1956.620.nc + phase: 0 
         (416 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC141109_38.5 Nucleotidyl transferase; Trimeric LpxA-like c...   695   0.0  
IMGA|CT963134_29.5 Glucose-1-phosphate adenylyltransferase, GlgD...   199   2e-51
IMGA|AC202496_4.4 Nucleotidyl transferase; Trimeric LpxA-like  c...    59   4e-09

>IMGA|AC141109_38.5 Nucleotidyl transferase; Trimeric LpxA-like
           chr04_pseudomolecule_IMGAG_V2 27108701-27102338 E
           EGN_Mt071002 20080227
          Length = 417

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/413 (80%), Positives = 366/413 (88%), Gaps = 3/413 (0%)

Query: 7   ERVVAVIMVGGPTKGTRFRPLSLNIAKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFY 66
           E+VVAVIMVGGPTKGTRFRPLS N  KPLFPLAGQPMVHHPISACKRIPNLAQIYLIGF+
Sbjct: 5   EKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFH 64

Query: 67  EEREFALYVSSISTELKVPVRYLKEEKPHGSAGGLYNFRDLIMDDDPSHIFLLNCDVCCS 126
           EEREFALYVSSIS ELK+PVRYLKE+KPHGSAGGLY FRD+IM+D PSHIFLLNCDVCCS
Sbjct: 65  EEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYYFRDIIMEDSPSHIFLLNCDVCCS 124

Query: 127 FPLLEMLDAHKKYGGMGTILVVKVSPESASQFGELVSDPVTNELLHYTEKPETFVSDRIN 186
           FPL  MLDAH KYGGMGT+LV+KVS ESA+QFGELV+DP T+ELLHYTEKPETFVSD IN
Sbjct: 125 FPLPSMLDAHIKYGGMGTMLVIKVSAESANQFGELVADPETHELLHYTEKPETFVSDLIN 184

Query: 187 CGVYIFTPDVFTAIEGVSTQRKDRANLRRVSSFEAMQPDTRSLPSNYVRLDQDILTPLAG 246
           CGVYIFTPD+F AIE VS  R+ R NLRR+SSFEA+Q  TR+LP ++VRLDQDIL+PLAG
Sbjct: 185 CGVYIFTPDIFAAIEDVSINREGRGNLRRLSSFEALQSATRTLPKDFVRLDQDILSPLAG 244

Query: 247 KKQLYIYETMDFWEQIKTPGMSIKCSSLYLSQFRYTAPHLLASGDGIKKSCIVGDVYIHP 306
           KK+LY YET DFWEQIKTPG+S+KCS LYL+QFRYT+PHLLASGDG K + IVGDVYIHP
Sbjct: 245 KKKLYTYETNDFWEQIKTPGLSLKCSELYLAQFRYTSPHLLASGDGKKNAKIVGDVYIHP 304

Query: 307 SAKVHPSAKIGPSVSISANARIGAGARLISCIVLDDVEIKENAVVIHAIVGWKSSIGRWS 366
           SAKVHPSAKIGP+VSISAN R+GAG RLI CIVLDDVE+KENAVVI++IVGWKSS+GRWS
Sbjct: 305 SAKVHPSAKIGPNVSISANVRVGAGVRLIGCIVLDDVEVKENAVVINSIVGWKSSLGRWS 364

Query: 367 RVQAS---GDYNAKLGVTILGXXXXXXXXXXXXNSIVLPHKTLNVGVQDEILL 416
           RVQAS   GDY+AKLG+TILG            NSIVLPHK LNV VQDEI+L
Sbjct: 365 RVQASLADGDYSAKLGITILGEAVTVEDEVVVINSIVLPHKILNVSVQDEIIL 417


>IMGA|CT963134_29.5 Glucose-1-phosphate adenylyltransferase, GlgD
           subunit chr03_pseudomolecule_IMGAG_V2 18469865-18465990
           F EGN_Mt071002 20080227
          Length = 361

 Score =  199 bits (507), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 196/400 (49%), Gaps = 48/400 (12%)

Query: 11  AVIMVGGPTKGTRFRPLSLNIAKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFYEERE 70
           A+I+VGG   GTR RPL+L++ KPL   A +PM+ H I A K I  + ++ L   Y+   
Sbjct: 3   ALILVGG--FGTRLRPLTLSVPKPLVDFANKPMILHQIEALKDI-GVTEVVLAINYQPEV 59

Query: 71  FALYVSSISTELKVPVRYLKEEKPHGSAGGLYNFRDLIMDDDPSHIFLLNCDVCCSFPLL 130
              ++     +L + +   +E +P G+AG L   RD ++D      F+LN DV   +PL 
Sbjct: 60  MLNFLKDFEEKLDIKITCSQETEPLGTAGPLALARDKLIDGSGEPFFVLNSDVISEYPLK 119

Query: 131 EMLDAHKKYGGMGTILVVKVSPESASQFGELVSDPVTNELLHYTEKPETFVSDRINCGVY 190
           EM+  HK +GG  +I+V KV  +  S++G +V +  T ++  + EKP+ FV ++IN G+Y
Sbjct: 120 EMIKFHKSHGGEASIMVTKV--DEPSKYGVVVMEETTGQVEKFVEKPKLFVGNKINAGIY 177

Query: 191 IFTPDVFTAIEGVSTQRKDRANLRRVSSFEAMQPDTRSLPSNYVRLDQDILTPLAGKKQL 250
           +  P V   IE           LR  S                  +++++   +A  K+L
Sbjct: 178 LLNPSVLDHIE-----------LRPTS------------------IEKEVFPKIAANKKL 208

Query: 251 YIYETMDFWEQIKTPGMSIKCSSLYLSQFRYTAPHLLASGDGIKKSCIVGDVYIHPSAKV 310
           Y      FW  I  P   I    LYL   R      LASG       I+G+V +H +AK+
Sbjct: 209 YAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKTSSKLASG-----PHILGNVIVHETAKI 263

Query: 311 HPSAKIGPSVSISANARIGAGARLISCIVLDDVEIKENAVVIHAIVGWKSSIGRWSRVQA 370
                IGP V+I     I +G RL  C V+  V IK++A +  +I+GW S++G+W+RV+ 
Sbjct: 264 GEGCLIGPDVAIGPGCTIESGVRLSCCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE- 322

Query: 371 SGDYNAKLGVTILGXXXXXXXXXXXXNSIVLPHKTLNVGV 410
                    +TILG              +VLPHK +   +
Sbjct: 323 --------NMTILGEDVHVSDEVYSNGGVVLPHKEIKTSI 354


>IMGA|AC202496_4.4 Nucleotidyl transferase; Trimeric LpxA-like
           chr04_pseudomolecule_IMGAG_V2 27052696-27051830 E
           EGN_Mt071002 20080227
          Length = 50

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/47 (61%), Positives = 32/47 (68%)

Query: 370 ASGDYNAKLGVTILGXXXXXXXXXXXXNSIVLPHKTLNVGVQDEILL 416
           A GDY+AKLG+TILG            NSIVLPHK LNV VQDEI+L
Sbjct: 4   ADGDYSAKLGITILGEAVTVEDEVVVINSIVLPHKILNVSVQDEIIL 50