Miyakogusa Predicted Gene

chr1.CM1409.180.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.CM1409.180.nd + phase: 2 /partial
         (693 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC145330_14.4 Tyrosine protein kinase, active site chr07_ps...  1197   0.0  

>IMGA|AC145330_14.4 Tyrosine protein kinase, active site
           chr07_pseudomolecule_IMGAG_V2 23285191-23278942 E
           EGN_Mt071002 20080227
          Length = 699

 Score = 1197 bits (3098), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/691 (83%), Positives = 606/691 (87%), Gaps = 1/691 (0%)

Query: 1   SPDQEXXXXXXXXXXXXXXXXXXNQKEFFYKFVDSDNLTAKLVDWFESVTEKSELKQPAF 60
           SPDQE                  N+KEFFYKFVDSD L  KLV WFESVTEK  LKQ AF
Sbjct: 5   SPDQESIGSGTKRSSVSSGGRSRNRKEFFYKFVDSDGLNEKLVHWFESVTEKYTLKQQAF 64

Query: 61  DVPFELIELQKFDYALEGISFQQLTRMPNAVHASSSDAVEATACLAIEDFLHASIKGLWE 120
           DVPFELIELQKFDYALEGISFQQLTRMPNAVHAS+S+AVEATACLAIEDFLHA IKGLWE
Sbjct: 65  DVPFELIELQKFDYALEGISFQQLTRMPNAVHASTSEAVEATACLAIEDFLHAGIKGLWE 124

Query: 121 AFWNQDEPMPFSVACLYNANMKFYQAETAIANGRLGGLCATGLLLNNPRHPHGKWDHVLE 180
           AFW+QDEPMPFS ACLYNANMKFYQAE AIANGRLGGLC TG+LLNN RHPHGKWDH+LE
Sbjct: 125 AFWSQDEPMPFSAACLYNANMKFYQAENAIANGRLGGLCGTGILLNNSRHPHGKWDHLLE 184

Query: 181 LALLGPDIRGLAFGSDRQPSPSVLGEALFYAIRVXXXXXXXXXXXXXDPSTVFILIVDSQ 240
           L LL  DIRGLA GSD QPS  VLGEALFYAIR+             DPSTVF+L+VDSQ
Sbjct: 185 LTLLRTDIRGLAVGSDCQPSLPVLGEALFYAIRMLLARSLSRLSFFPDPSTVFVLLVDSQ 244

Query: 241 YGGVVKVEGDVNMLNFDVNNVYECAAEWVKNHSRISVSPMYRIWNKLGNANWGDIGSLQI 300
           YGGVVKVEGDV+ LNFDVNNVYECAAEWV+NHSRISVSP+YRIWNKLGNANWGDIG+LQ+
Sbjct: 245 YGGVVKVEGDVSKLNFDVNNVYECAAEWVQNHSRISVSPIYRIWNKLGNANWGDIGALQV 304

Query: 301 LFATFHCIMQYAGMPKNSIEDLAADHSSRLQARRIERHLGDAT-VNENGLFRYQQRSVSP 359
           LFATFHCIMQYAGMPK+S+EDLAADHSSRLQ RRIER LGD T VN NG F+YQQRSVSP
Sbjct: 305 LFATFHCIMQYAGMPKHSVEDLAADHSSRLQTRRIERQLGDTTRVNGNGPFQYQQRSVSP 364

Query: 360 EIVEVQDDPVKIDSKESMKLEEGSMLWLEDSDWQKGYQIKEVINTGEFTYYIASNVEDPG 419
           EIVEVQDD VK+DSKESMKLEEGSMLWLEDSD QKGYQI+EVI TGE TYYIAS VEDPG
Sbjct: 365 EIVEVQDDYVKVDSKESMKLEEGSMLWLEDSDGQKGYQIQEVIKTGELTYYIASYVEDPG 424

Query: 420 KNLFLYVGSHPSQLEPAWEDMNLWYQVQRQTKVLTIMKQKGLSCKYLPQLSASGRIIHPG 479
            +LFLYVGSHPSQ EPAWEDMNLWYQVQRQTKVLTIMKQKGLS KYLPQL A GRIIHPG
Sbjct: 425 TDLFLYVGSHPSQQEPAWEDMNLWYQVQRQTKVLTIMKQKGLSSKYLPQLIAFGRIIHPG 484

Query: 480 HCRRPSSGGNCDHPWCGTPVLVTSPVGETVAEMVRTGQFGPDEAIKCCHDCXXXXXXXXX 539
           HCRRPSSGGNCDHPWCGTPVLV SP+GETVAEMV  G+FG D+AIKCCHDC         
Sbjct: 485 HCRRPSSGGNCDHPWCGTPVLVISPIGETVAEMVEAGRFGSDDAIKCCHDCLSALSTATS 544

Query: 540 XGIRHGDIRPENVICVKSGVRHPYFVLIGWGHAILEDRDRPAMNLHFSSTYALQEGKLCS 599
            G+RHGDIRPENVICV+SGVR PYFVLIGWGHAILEDRDRPAMNLHFSSTYALQEGKLCS
Sbjct: 545 AGLRHGDIRPENVICVRSGVRQPYFVLIGWGHAILEDRDRPAMNLHFSSTYALQEGKLCS 604

Query: 600 ASDAESLVYMLYFSCGGGFPDLDSVEGALQWRETSWSRRSIQQKLGDIFTVLKAFADYVD 659
           ASDAESLVYMLY+SCGG  PDLDSVEGALQWRETSWSRRSIQQKLGDI TVLKAFADYVD
Sbjct: 605 ASDAESLVYMLYYSCGGVLPDLDSVEGALQWRETSWSRRSIQQKLGDISTVLKAFADYVD 664

Query: 660 SLCGTPYPMDYEIWLRRLRRNIHEEDHGKEI 690
           SLCGTPYP++Y+IWLRRLRRNIHE+DHGKEI
Sbjct: 665 SLCGTPYPINYDIWLRRLRRNIHEDDHGKEI 695