Miyakogusa Predicted Gene
- chr1.CM0591.620.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.CM0591.620.nd + phase: 0
(401 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|CT027663_23.5 GAT; ENTH/VHS chr05_pseudomolecule_IMGAG_V2 1... 611 e-175
IMGA|AC174318_42.4 GAT; ENTH/VHS chr04_pseudomolecule_IMGAG_V2 2... 429 e-120
IMGA|AC152156_2.4 GAT; ENTH/VHS chr04_pseudomolecule_IMGAG_V2 20... 429 e-120
IMGA|AC202371_1.4 hypothetical protein chr04_pseudomolecule_IMGA... 154 6e-38
IMGA|AC149809_34.4 GAT; ENTH/VHS chr07_pseudomolecule_IMGAG_V2 1... 122 3e-28
IMGA|AC153459_39.4 GAT; ENTH/VHS chr04_pseudomolecule_IMGAG_V2 3... 84 1e-16
>IMGA|CT027663_23.5 GAT; ENTH/VHS chr05_pseudomolecule_IMGAG_V2
1158167-1154103 F EGN_Mt071002 20080227
Length = 399
Score = 611 bits (1575), Expect = e-175, Method: Compositional matrix adjust.
Identities = 325/404 (80%), Positives = 344/404 (85%), Gaps = 8/404 (1%)
Query: 1 MTDNNLMEKVNALSERLKISGTEVGRKMTAGMTSMSFKVKEFFQGGPNQVDKLVEDATSE 60
M+DN LMEKVNA E+LKI G EVGRK+T GM+SMSFKVKEFF G PNQVDKLVEDATSE
Sbjct: 1 MSDN-LMEKVNAFGEKLKIGGVEVGRKVTEGMSSMSFKVKEFFNG-PNQVDKLVEDATSE 58
Query: 61 ALDEPDWATNLHLCDLINTDKVNSIDLIRAIKKRIMDKSPRVQYLALVLLETCVKNCEKA 120
A +EPDWA NL LCDLINT+KVNS++LIRAIKKRIM K PRVQYLALVLLET VKNCEKA
Sbjct: 59 AHEEPDWAMNLDLCDLINTEKVNSVELIRAIKKRIMIKIPRVQYLALVLLETVVKNCEKA 118
Query: 121 FSEVAAERVLDEMVRLIDDPHTVVNNRNKALIMIEAWGESTGELRYLPVFEETYKSLKSR 180
FSEVAAERVLDEMVR+IDDP TVVNNRNKAL+MIEAWGESTGELRYLPVFEETYKSL+SR
Sbjct: 119 FSEVAAERVLDEMVRVIDDPQTVVNNRNKALVMIEAWGESTGELRYLPVFEETYKSLRSR 178
Query: 181 GIRFPGRDNESLAPIFTXXXXXXXXXXXXXXXXXXXXXXXHEVPVLSFTPEQTKEAFDVA 240
GIRFPGRDNESLAPIFT +VPV +T EQTKEAFD+A
Sbjct: 179 GIRFPGRDNESLAPIFT--PPRSATVPEPPHVDDIPRQFQQDVPVQGYTEEQTKEAFDIA 236
Query: 241 RNSIELLSTVLSSSPQQDVLQDDLTTTLVQQCRRSQSTVQRIVETSGDNEALLFEALNVN 300
RNSIELLSTVLSSSPQQDVLQDDLT TLVQQCRRSQ TVQRIVET+GDNEA+LFEALNVN
Sbjct: 237 RNSIELLSTVLSSSPQQDVLQDDLTATLVQQCRRSQITVQRIVETAGDNEAILFEALNVN 296
Query: 301 DEIQKVLDKYEEVKKPTTAPLQPEPAMIPVAVEPDESPRH---TKEDALIRKPAGSRTVV 357
DEI KVL KYEE+K P APLQPEPAMIPVAVEPDESPRH KED+LIRKPAGSR V
Sbjct: 297 DEILKVLTKYEELKPPPVAPLQPEPAMIPVAVEPDESPRHLDDAKEDSLIRKPAGSRPGV 356
Query: 358 QGGSNDDMMDDLDEMIFGKKSGDASDAGHDTKKQQSSKDDLISF 401
QGG+NDDMMDDLDEMIFG K G ASD GHDTKK QSSKDDLISF
Sbjct: 357 QGGNNDDMMDDLDEMIFGSKVGGASDGGHDTKK-QSSKDDLISF 399
>IMGA|AC174318_42.4 GAT; ENTH/VHS chr04_pseudomolecule_IMGAG_V2
21078530-21075814 E EGN_Mt071002 20080227
Length = 414
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 256/409 (62%), Positives = 308/409 (75%), Gaps = 16/409 (3%)
Query: 1 MTDNNLMEKVNALSERLKISGTEVGRKMTAGMTSMSFKVKEFFQGGPNQVDKLVEDATSE 60
M+D+ L EKVNA+ ERLKI+G E+GRKM+AG+ +MSFK+KEFFQ PNQ +KLV +ATSE
Sbjct: 1 MSDS-LKEKVNAIGERLKINGAEMGRKMSAGIGTMSFKMKEFFQE-PNQAEKLVYEATSE 58
Query: 61 ALDEPDWATNLHLCDLINTDKVNSIDLIRAIKKRIMDKSPRVQYLALVLLETCVKNCEKA 120
+LDEP+W L++CD++N +K+ + D++RAIKKRIM KS R QYLALVLLE V+NC+K
Sbjct: 59 SLDEPNWDMILNICDMVNAEKLYTCDVVRAIKKRIMMKSVRGQYLALVLLEALVENCDKG 118
Query: 121 FSEVAAERVLDEMVRLIDDP-HTVVNNRNKALIMIEAWGESTGELRYLPVFEETYKSLKS 179
F EVA ERVLDEMV+++DDP + V ++ KAL+MI+ WGES ELRYLPV+EETYKSLKS
Sbjct: 119 FFEVATERVLDEMVKIVDDPDQSFVASKEKALMMIQVWGESNTELRYLPVYEETYKSLKS 178
Query: 180 RGIRFPGRDNESLAPIFTXXXXXXX----------XXXXXXXXXXXXXXXXHEVPVLSFT 229
RGIRFPGR+NES API T E PV S
Sbjct: 179 RGIRFPGRNNESSAPILTHYHAPSAPEIDHSLGHLIQHDTQLDRSLAHLIQRENPVPSLK 238
Query: 230 PEQTKEAFDVARNSIELLSTVLSSSPQQDVLQDDLTTTLVQQCRRSQSTVQRIVETSGDN 289
PEQTKEAFDVARNS ELLS+VLSSSPQQ+VL+ DLT TLVQQC +SQSTV RI+ T G+N
Sbjct: 239 PEQTKEAFDVARNSTELLSSVLSSSPQQNVLKQDLTITLVQQCHQSQSTVHRIIATVGEN 298
Query: 290 EALLFEALNVNDEIQKVLDKYEEV-KKPTTAPLQPEP-AMIPVAVEPDESPRHTKEDALI 347
EALL EALNVNDEI KVL KYEE+ KKP +PL+PE MIPV +EPDESP H +E+ALI
Sbjct: 299 EALLCEALNVNDEIHKVLSKYEELKKKPKASPLEPEQNMMIPVTIEPDESP-HFREEALI 357
Query: 348 RKPAGSRTVVQGGSNDDMMDDLDEMIFGKKSGDASDAGHDTKKQQSSKD 396
RKPA SRT VQG S+DDMMDDLDEMIFGKK GDAS+ D K+ + ++
Sbjct: 358 RKPACSRTGVQGLSHDDMMDDLDEMIFGKKGGDASEWRQDPKRTNNHQN 406
>IMGA|AC152156_2.4 GAT; ENTH/VHS chr04_pseudomolecule_IMGAG_V2
20944874-20942158 E EGN_Mt071002 20080227
Length = 414
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 256/409 (62%), Positives = 308/409 (75%), Gaps = 16/409 (3%)
Query: 1 MTDNNLMEKVNALSERLKISGTEVGRKMTAGMTSMSFKVKEFFQGGPNQVDKLVEDATSE 60
M+D+ L EKVNA+ ERLKI+G E+GRKM+AG+ +MSFK+KEFFQ PNQ +KLV +ATSE
Sbjct: 1 MSDS-LKEKVNAIGERLKINGAEMGRKMSAGIGTMSFKMKEFFQE-PNQAEKLVYEATSE 58
Query: 61 ALDEPDWATNLHLCDLINTDKVNSIDLIRAIKKRIMDKSPRVQYLALVLLETCVKNCEKA 120
+LDEP+W L++CD++N +K+ + D++RAIKKRIM KS R QYLALVLLE V+NC+K
Sbjct: 59 SLDEPNWDMILNICDMVNAEKLYTCDVVRAIKKRIMMKSVRGQYLALVLLEALVENCDKG 118
Query: 121 FSEVAAERVLDEMVRLIDDP-HTVVNNRNKALIMIEAWGESTGELRYLPVFEETYKSLKS 179
F EVA ERVLDEMV+++DDP + V ++ KAL+MI+ WGES ELRYLPV+EETYKSLKS
Sbjct: 119 FFEVATERVLDEMVKIVDDPDQSFVASKEKALMMIQVWGESNTELRYLPVYEETYKSLKS 178
Query: 180 RGIRFPGRDNESLAPIFTXXXXXXX----------XXXXXXXXXXXXXXXXHEVPVLSFT 229
RGIRFPGR+NES API T E PV S
Sbjct: 179 RGIRFPGRNNESSAPILTHYHAPSAPEIDHSLGHLIQHDTQLDRSLAHLIQRENPVPSLK 238
Query: 230 PEQTKEAFDVARNSIELLSTVLSSSPQQDVLQDDLTTTLVQQCRRSQSTVQRIVETSGDN 289
PEQTKEAFDVARNS ELLS+VLSSSPQQ+VL+ DLT TLVQQC +SQSTV RI+ T G+N
Sbjct: 239 PEQTKEAFDVARNSTELLSSVLSSSPQQNVLKQDLTITLVQQCHQSQSTVHRIIATVGEN 298
Query: 290 EALLFEALNVNDEIQKVLDKYEEV-KKPTTAPLQPEP-AMIPVAVEPDESPRHTKEDALI 347
EALL EALNVNDEI KVL KYEE+ KKP +PL+PE MIPV +EPDESP H +E+ALI
Sbjct: 299 EALLCEALNVNDEIHKVLSKYEELKKKPKASPLEPEQNMMIPVTIEPDESP-HFREEALI 357
Query: 348 RKPAGSRTVVQGGSNDDMMDDLDEMIFGKKSGDASDAGHDTKKQQSSKD 396
RKPA SRT VQG S+DDMMDDLDEMIFGKK GDAS+ D K+ + ++
Sbjct: 358 RKPACSRTGVQGLSHDDMMDDLDEMIFGKKGGDASEWRQDPKRTNNHQN 406
>IMGA|AC202371_1.4 hypothetical protein
chr04_pseudomolecule_IMGAG_V2 35606977-35605850 H
EGN_Mt071002 20080227
Length = 221
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 140/217 (64%), Gaps = 20/217 (9%)
Query: 173 TYKSLKSRGIRFPGRDNESLAPIFTXXXXXXXXXXXXXXXX----------XXXXXXXHE 222
T +SLKSRGIRFPGR+NES API T E
Sbjct: 8 TVESLKSRGIRFPGRNNESSAPILTHYHAPSAPEIDHSLGHLIQHDTQLDRSLAHLIQRE 67
Query: 223 VPVLSFTPEQTKEAFDVARNSIELLSTVLSSSPQQDVLQDDLTTTLVQQCRRSQSTVQRI 282
PV S PEQTKEAFDVARNS ELLS+VLSSSPQQ+VL+ + + S +++ +
Sbjct: 68 NPVPSLKPEQTKEAFDVARNSTELLSSVLSSSPQQNVLKYN---NAISPNLPSIESLRLL 124
Query: 283 VETSGDNEALLFEALNVNDEIQKVLDKYEEV-KKPTTAPLQPEP-AMIPVAVEPDESPRH 340
+ NEALL EALNVNDEI KVL KYEE+ KKP +PL+PE MIPV +EPDESP H
Sbjct: 125 AK----NEALLCEALNVNDEIHKVLSKYEELKKKPKASPLEPEQNMMIPVTIEPDESP-H 179
Query: 341 TKEDALIRKPAGSRTVVQGGSNDDMMDDLDEMIFGKK 377
+E+ALIRKPA SRT VQG S+DDMMDDLDEMIF +K
Sbjct: 180 FREEALIRKPACSRTGVQGLSHDDMMDDLDEMIFWQK 216
>IMGA|AC149809_34.4 GAT; ENTH/VHS chr07_pseudomolecule_IMGAG_V2
14932637-14938639 E EGN_Mt071002 20080227
Length = 731
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 140/264 (53%), Gaps = 10/264 (3%)
Query: 55 EDATSEALDEPDWATNLHLCDLINTDKVNSIDLIRAIKKRIMDKSPRVQYLALVLLETCV 114
E ATS+ L PDW N+ +CD IN++ D+++A+KKR+ +S +VQ LAL LLET V
Sbjct: 15 EKATSDLLMGPDWTMNIEICDSINSNHWQPKDVVKAVKKRLQHRSSKVQILALTLLETMV 74
Query: 115 KNC-EKAFSEVAAERVLDEMVRLIDDPHTVVNNRNKALIMIEAWGESTGEL--RYLPVFE 171
KNC + ++ +L+EM++++ + R+K L ++++W E+ G +Y P +
Sbjct: 75 KNCGDYVHFQITDRHILEEMIKIVRK-KADMQVRDKILALLDSWQEAFGGAGGKY-PQYY 132
Query: 172 ETYKSLKSRGIRFPGRDNESLAPIFTXXXXXXXXXXXXXXXXXXXXXXXHEVPVLSFTPE 231
Y LK G+ FP R ++ APIFT E + +
Sbjct: 133 WAYDELKRSGVSFPKRSPDA-APIFTPPPTHPSLRQTGYGMPSSSSKTLDET-MATEIES 190
Query: 232 QTKEAFDVARNSIELLSTVLSSSPQQD--VLQDDLTTTLVQQCRRSQSTVQRIVETSGDN 289
+ + + R+ ++LLS +L + D ++D++ LV +CR +Q + +++ T+GD
Sbjct: 191 LSMSSLESMRHVLDLLSDMLQAVNPNDRVAVKDEVIVDLVDRCRSNQKKLMQMLTTTGDE 250
Query: 290 EALLFEALNVNDEIQKVLDKYEEV 313
E LL L +ND IQ +L +++ +
Sbjct: 251 E-LLGRGLELNDNIQSLLARHDAI 273
>IMGA|AC153459_39.4 GAT; ENTH/VHS chr04_pseudomolecule_IMGAG_V2
34380583-34386521 E EGN_Mt071002 20080227
Length = 436
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 31/276 (11%)
Query: 53 LVEDATSEALDEPDWATNLHLCDLINTDKVNSIDLIRAIKKRIMDKSPRVQYLALVLLET 112
LV ATSE L E DW N+ + +L+ D+ + D+++AIKKR+ +K+P Q A++LLE
Sbjct: 34 LVNAATSEKLSEIDWMKNIEISELVARDQRKAKDVVKAIKKRLGNKNPNAQLYAVMLLEM 93
Query: 113 CVKNCEKAFSE-VAAERVLDEMVRLIDDPHTVVNNRNKALIMIEA----WGESTGELRYL 167
+ N +E V V+ +V+++ + + R + ++++A G ++G+
Sbjct: 94 LMNNIGDHINEQVVRAEVIPILVKIVKK-KSDLPVREQIFLLLDATQTSLGGASGK---F 149
Query: 168 PVFEETYKSLKSRGIRFPGR------DNESLAPIFTXXXXXXXXXXXXXXXXXXXXXXXH 221
P + + Y L S G++FP R + SL P T +
Sbjct: 150 PQYYKAYYDLVSAGVQFPQRAQVVQSNRPSLQP-NTTNNVPKREPSPLRRGRVAQKAESN 208
Query: 222 EVPVLSFTPEQTKEAFDVARNSIELLSTVL----SSSPQQDVLQDDLTTTLVQQCRRSQS 277
VP A N +E+L VL + PQ +D+ T LV+QC +
Sbjct: 209 TVP--------ESRIIQKASNVLEVLKEVLDAVDAKHPQGA--RDEFTLDLVEQCSFQKQ 258
Query: 278 TVQRIVETSGDNEALLFEALNVNDEIQKVLDKYEEV 313
V +V S D E ++ A+ VN+++QKVL++++++
Sbjct: 259 RVMHLVMASRD-ERIVSRAIEVNEQLQKVLERHDDL 293