Miyakogusa Predicted Gene

chr1.CM0496.70.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.CM0496.70.nd - phase: 0 /partial
         (909 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|CR974443_32.5 hypothetical protein chr03_pseudomolecule_IMG...   793   0.0  

>IMGA|CR974443_32.5 hypothetical protein
           chr03_pseudomolecule_IMGAG_V2 26675809-26668818 E
           EGN_Mt071002 20080227
          Length = 1151

 Score =  793 bits (2049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/547 (72%), Positives = 446/547 (81%), Gaps = 6/547 (1%)

Query: 368 GSHVDDRSARGKESGTKXXXXXXXXXXXXXXXRAVKSYYPDAEKRTLSSNRADSDVDRGR 427
           GSH DDRSAR K+SGTK               RAVKSYYPD EKR+L+S+RAD D+D+GR
Sbjct: 360 GSHGDDRSARAKDSGTKKRTLDDRDDYNDSKARAVKSYYPDTEKRSLTSSRADPDLDKGR 419

Query: 428 SQSRHAHADSTGTSNKHRSSPASNTHIGKDEHRNANAEDSKYRDSTVEQRTKSSREGYSG 487
           S  R AHADS+GTS+KHRSSPASN H+GKDE+RNANAED+KYRDST+EQRTK+SREGYSG
Sbjct: 420 SLPRQAHADSSGTSSKHRSSPASNAHVGKDEYRNANAEDTKYRDSTIEQRTKASREGYSG 479

Query: 488 ISDRGPKYKSMDKPIKIDECPAGDLSTERSSSAKASPMGLIERSPSSTSIERRYVNKSGV 547
           ISDRGPKYK  +KP+KIDE PAGDL  ERSSS KASPMGL+ERSPSSTSIERRY+NKS V
Sbjct: 480 ISDRGPKYKLTEKPVKIDEFPAGDLPIERSSSRKASPMGLMERSPSSTSIERRYMNKSVV 539

Query: 548 KRNLEIDESGRRSSNDGRDFSTSDDRHGRELTLEK--LDEPSQADSSFYSRTNQSNPPVI 605
           KRNLEIDESGRRSS D RD S SDDRH RE T+EK  LDEPSQAD SFY RTNQ+NPPVI
Sbjct: 540 KRNLEIDESGRRSSIDARDVS-SDDRHNREFTVEKPLLDEPSQADPSFYGRTNQNNPPVI 598

Query: 606 PTPPGFRTALDRPFTGSMEDDVRDNSNTRYRRSSEH-GFGRMHGGNSWRAVPNWTSXXXX 664
           P PP FR  LDRP+ GS+EDDVRDNSN+RYRR++E  GFGR+HGGNSWRA PNWTS    
Sbjct: 599 PPPPSFRATLDRPYMGSLEDDVRDNSNSRYRRNNEQSGFGRVHGGNSWRANPNWTSHVPN 658

Query: 665 XXXXXXXXXXXXXXQAMMPQFASQPLFGIRAPMEVNHAGIPYHIADADRFPGHLRPLGWP 724
                         Q M+PQF+SQPLFG+R  +EVNHAGIPYHI DADRFPGHLRP+GWP
Sbjct: 659 GFVPFPPGPGHGGFQTMIPQFSSQPLFGVRPQLEVNHAGIPYHIVDADRFPGHLRPIGWP 718

Query: 725 NMMDGTGPAHLHGWDNSNGVFRDDTQMYGGSDWDRNRHSTNSHGWESGSETWKEQNSDSK 784
            +MDGTGPAHLHGWDN+NGV RD   MYGG DWDRNRH TN+HGWESGSE+WKEQN DSK
Sbjct: 719 GLMDGTGPAHLHGWDNNNGVSRDGPHMYGGPDWDRNRHPTNNHGWESGSESWKEQNYDSK 778

Query: 785 KDLPSPACKDESVPAVVDN-GLTDQTIRMSQDEHNRDEFHDKSPETKLTSVNSPEKVPLN 843
           KDLPSPACKDESVPAVVDN G+ DQTI++SQDEH  +E H+KSPETKL+SV SP KVPLN
Sbjct: 779 KDLPSPACKDESVPAVVDNGGVPDQTIQVSQDEHKPNESHEKSPETKLSSVMSPRKVPLN 838

Query: 844 SSPTAALEKVPDTSTPSDNTTLLSRFYLSKLDISVDLVLPELYDQCMYTLNIGKPV-DAV 902
           SSP+   EKVPD  TP D +++ +RFYLSKLDIS DLVLPELYDQC+  LN+GK   D V
Sbjct: 839 SSPSTDFEKVPDNKTPEDYSSIFTRFYLSKLDISSDLVLPELYDQCVCALNVGKKASDDV 898

Query: 903 ASTELLL 909
           ASTEL L
Sbjct: 899 ASTELSL 905



 Score =  162 bits (411), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/278 (44%), Positives = 140/278 (50%), Gaps = 12/278 (4%)

Query: 26  VKDRRSSKEDGGSGVKASKDSGSGEKRRLDSKDAAAAAHGN-GEYSDEYASSSKXXXXXX 84
            KDR+S  +D  S VK +KDS   EKRRLDSK+     HGN GEYSDEYASSSK      
Sbjct: 26  AKDRKS--KDDTSSVKVTKDSSGAEKRRLDSKE--VHVHGNGGEYSDEYASSSKRRRESG 81

Query: 85  XXXXXXXXXXXXXS--KKSKTVGDSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGV 142
                           K SK +GDS+                               E  
Sbjct: 82  GGGGGDRWNGGDEGSKKSSKAIGDSRDLKNSKGEEVKRSSGRHRDSSSSGRKENVEKEKE 141

Query: 143 AEKEKERKLKDGRSEESVEIDDQDQRLSKQVFENNDSKKIDELRSPELDNQLEXXXXXXX 202
            +K+ +      + EESV+  DQ+ R SKQ  ENNDSKK DELRSPE D QLE       
Sbjct: 142 KDKKVKEG----KIEESVDA-DQEHRSSKQGVENNDSKKTDELRSPEQDIQLERRTRKKR 196

Query: 203 XXXXXXXXXXXXVGDGYDRRLSSXXXXXXXXXXXXXXXXXXXXXXXXXEEMDRENKHRHD 262
                       VGDGYDR LSS                         +E DRENKHRHD
Sbjct: 197 DDYGDGDKHQDDVGDGYDRHLSSRDDIAKDGKKKDDRRNDEKYRDKYRDEKDRENKHRHD 256

Query: 263 KQRDERPAKDHTSIRSDDKYTREEKNSLESRQKRTKHP 300
           KQRDERPAKDHT+IRSDDK+ REEKN+LESRQKRTKHP
Sbjct: 257 KQRDERPAKDHTTIRSDDKHAREEKNNLESRQKRTKHP 294