Miyakogusa Predicted Gene
- chr1.CM0433.300.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.CM0433.300.nd + phase: 0 /partial
(613 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC160629_11.5 Tudor , related chr01_pseudomolecule_IMGAG_V2... 484 e-137
IMGA|CU019603_5.4 Tudor chr03_pseudomolecule_IMGAG_V2 19991467-... 392 e-109
IMGA|AC160629_4.5 Tudor chr01_pseudomolecule_IMGAG_V2 4171086-4... 285 3e-77
IMGA|AC174319_32.5 T24D18.4 , related chr04_pseudomolecule_IMGAG... 239 3e-63
IMGA|AC149032_41.5 HEAT chr02_pseudomolecule_IMGAG_V2 7253480-72... 201 5e-52
IMGA|AC166038_50.4 binding , related chr04_pseudomolecule_IMGAG... 119 3e-27
IMGA|AC166038_49.4 hypothetical protein chr04_pseudomolecule_IMG... 59 6e-09
>IMGA|AC160629_11.5 Tudor , related chr01_pseudomolecule_IMGAG_V2
4185113-4194805 E EGN_Mt071002 20080227
Length = 938
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 292/577 (50%), Positives = 360/577 (62%), Gaps = 84/577 (14%)
Query: 15 AGNELADPPSSAEELLSILERVESYLSKIEQTPNESMQTALSPTLKALTGEIFLKHSDAD 74
AGN+L DPPSS + LL IL ++ES LS++EQ+P ESM ALSP+LKAL + +KHSDAD
Sbjct: 15 AGNKLLDPPSSVDNLLDILIQIESCLSRVEQSPPESMLNALSPSLKALIADKLIKHSDAD 74
Query: 75 VKVAVASCLSEITRITAPDAPYDDDEMKEVFQLIVSSFENLHDKSSRSYAKKLSMLETVA 134
VKVA+ASC SEITRITAPDAPYDD +MKEVF+LIVSSFENLHDKSSR Y+K+ +LETVA
Sbjct: 75 VKVALASCFSEITRITAPDAPYDDGQMKEVFRLIVSSFENLHDKSSRWYSKRTLILETVA 134
Query: 135 KVRSCVVMLDLECDHLILEMFQHFLKEIREHHPEDVFSSMETVMTLVLEESEDISMDLLC 194
KVRSCVVMLDLECD LILEMFQHFLK IREHHP++VFSSMET+M L LEESE+IS DLL
Sbjct: 135 KVRSCVVMLDLECDALILEMFQHFLKTIREHHPDNVFSSMETIMILCLEESEEISDDLLS 194
Query: 195 PLLATFKKDNEEVSPIALQLVERVLENCATKLQPYLVQAVKTLGISVDD-SKILAKICQD 253
P+L + KKDNEEV PIA +L ERVLE+CAT+L+P L+QAV TLGIS+DD +LA IC++
Sbjct: 195 PILDSVKKDNEEVLPIARKLGERVLESCATRLKPCLLQAVNTLGISLDDYGDVLASICKE 254
Query: 254 ASDSFEKNDVCVSSEHV-------------AAKGDA---TEAEHSQQDNPNGNRSPKSVM 297
SD+ +NDVC +S HV +A+ D+ EA QQDN G+RSPKSVM
Sbjct: 255 TSDNLAQNDVCATSGHVVHDRKSAEEPVEESAQVDSEITKEATPPQQDNAAGDRSPKSVM 314
Query: 298 SNGVACVREDNALADSKS------------------------------------------ 315
SNG+A ED+ L SKS
Sbjct: 315 SNGIAQAGEDDTLDVSKSLEKQDGTDSPVLSKGNNLSGNDERDDMDTEKIDSKDPKLERS 374
Query: 316 --NKQEDTDCSGHSESLDVSGQRELNNLDAEKVDNDGGXXXXXXXXXXXXXXXXXXXXXX 373
KQ+ TD S+ ++SG E +++D EK+D+
Sbjct: 375 TIKKQDGTDSPVLSKGNNLSGNDERDDMDTEKIDS------KEPKPERSVRRKGKKASSS 428
Query: 374 XVKAGSQGQVVAHEKEAEKPSVVAGSQDQVDADEKEAEKRLDSEAPSSPHEDHSVEAAGP 433
S+ V EKEAEK AD K ++K E P S +ED VEA G
Sbjct: 429 KSTKPSKKSNVVSEKEAEKT-----------ADSKSSKK----EVPISLNEDSVVEATGT 473
Query: 434 TEEDEETHANISSPEACNDDSEVKGSPSTSENLPNKNHSKKLGKAKMKEDPAKEGAAEDV 493
+E D+E A ISSP+A +S+ GSPS SE+ ++N SKK + K + AKE AAED+
Sbjct: 474 SENDKEIKAKISSPKAGGLESDAAGSPSPSESNHDENRSKKRVRTKKNDSSAKEVAAEDI 533
Query: 494 SNKMSKGASDSEAKPARHSVKKALGRNSDVKDTTVAH 530
S K+S+G SDS+ KPAR S KK R+SDVK TV H
Sbjct: 534 SKKVSEGTSDSKVKPARPSAKKGPIRSSDVK--TVVH 568
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 528 VAHEKEAEKRLDS-----EAPSSPHEGHSVEAAGPTEDDKETHADISSPEACDDESEVKA 582
V EKEAEK DS E P S +E VEA G +E+DKE A ISSP+A ES+
Sbjct: 439 VVSEKEAEKTADSKSSKKEVPISLNEDSVVEATGTSENDKEIKAKISSPKAGGLESDAAG 498
Query: 583 SPSTSENLHDQSSRTGKQIR 602
SPS SE+ HD+ +R+ K++R
Sbjct: 499 SPSPSESNHDE-NRSKKRVR 517
>IMGA|CU019603_5.4 Tudor chr03_pseudomolecule_IMGAG_V2
19991467-19985174 H EGN_Mt071002 20080227
Length = 777
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/513 (45%), Positives = 299/513 (58%), Gaps = 118/513 (23%)
Query: 15 AGNELADPPSSAEELLSILERVESYLSKIEQTPNESMQTALSPTLKALTGEIFLKHSDAD 74
AGN+LADPPSS +ELLS+L R+ESYL+K+EQ P SM+TAL+P +K L G L+H D D
Sbjct: 15 AGNKLADPPSSVDELLSLLNRLESYLAKVEQAPRTSMRTALAPCMKELVGNKLLRHPDPD 74
Query: 75 VKVAVASCLSEITRITAPDAPYDDDEMKEVFQLIVSSFENLHDKSSRSYAKKLSMLETVA 134
VK A+A+C+SEITRI+APD PYDDD+MKE+FQLIVSSFENLHDK SRSY + +LETVA
Sbjct: 75 VKAALAACISEITRISAPDTPYDDDQMKEIFQLIVSSFENLHDKLSRSYENRRIVLETVA 134
Query: 135 KVRSCVVMLDLECDHLILEMFQHFLKEIREHHPEDVFSSMETVMTLVLEESEDISMDLLC 194
KVRSCVVMLDL+CD LILEMFQHFLK IR+HHP+DVFSSMET+MTL
Sbjct: 135 KVRSCVVMLDLDCDALILEMFQHFLKTIRDHHPKDVFSSMETIMTL-------------- 180
Query: 195 PLLATFKKDNEEVSPIALQLVERVLENCATKLQPYLVQAVKTLGISVDD-SKILAKICQD 253
EV PIA +L ERVLE+C +KL+P LVQAV+TLGIS+DD S++L I Q+
Sbjct: 181 -----------EVFPIARKLGERVLESCGSKLKPCLVQAVRTLGISLDDYSEVLGSIFQE 229
Query: 254 ASDSFEKNDVCVSSEHVAAKGDATEAEHSQQDNPNGNRSPKSVMSNGVACVREDNALADS 313
+ + + EA S +DN NGNR+ KSV ++GVA V ED
Sbjct: 230 EAKAIK------------------EAAQSPKDNRNGNRNSKSVTNDGVARVGEDE----- 266
Query: 314 KSNKQEDTDCSGHSESLDVSGQRELNNLDAEKVDNDGGXXXXXXXXXXXXXXXXXXXXXX 373
E N+LD KV+
Sbjct: 267 -----------------------EFNDLDGRKVE-------------------------- 277
Query: 374 XVKAGSQGQVVAHEKEAEKPSVVAGSQDQVDADEKEAEKRLDSEAPSSPHEDHSVEAAGP 433
Q A +K KPS S K +EK +DS + H +
Sbjct: 278 ------QKLEEATKKSRRKPSHSTKSA-------KPSEKMIDSGS-------HRKKVLSS 317
Query: 434 TEEDEETHANISSPEACNDDSEVKGSPSTSENLPNKNHSKKLGKAKMKEDPAKEGAAEDV 493
+ ED+E ++S A N +S+V SPS S++LP++NHS+KL KA+ K+ P+ AE V
Sbjct: 318 SHEDQEVAYAVTSRRAYNVESQVMASPSPSDSLPDENHSEKLCKAETKDSPSNVEVAEAV 377
Query: 494 SNKMSKGASDSEAKPARHSVKKALGRNSDVKDT 526
S K S+GAS S+AKP + V+K LG+NS VK T
Sbjct: 378 SKKASEGASISKAKPVKQPVRKVLGQNSGVKKT 410
>IMGA|AC160629_4.5 Tudor chr01_pseudomolecule_IMGAG_V2
4171086-4173578 H EGN_Mt071002 20080227
Length = 246
Score = 285 bits (730), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 172/212 (81%)
Query: 15 AGNELADPPSSAEELLSILERVESYLSKIEQTPNESMQTALSPTLKALTGEIFLKHSDAD 74
AGN+L +PPSS + LL +L +V LSK+EQ+P++S+Q ALSP+LKAL + +KHSD
Sbjct: 27 AGNKLLNPPSSVDNLLRLLGQVGKSLSKVEQSPSKSIQKALSPSLKALISDKLIKHSDVG 86
Query: 75 VKVAVASCLSEITRITAPDAPYDDDEMKEVFQLIVSSFENLHDKSSRSYAKKLSMLETVA 134
VKVA+ASCLSE+TRITAPD PY+D +MKEV +LIVSSFENLHD SSR Y ++S+LETVA
Sbjct: 87 VKVALASCLSELTRITAPDGPYNDHQMKEVLRLIVSSFENLHDMSSRWYETRISILETVA 146
Query: 135 KVRSCVVMLDLECDHLILEMFQHFLKEIREHHPEDVFSSMETVMTLVLEESEDISMDLLC 194
KVR CVVMLDLECD LILEMF+ FLK IRE+HPE VFSSME +M V+EES+DIS+ LL
Sbjct: 147 KVRLCVVMLDLECDALILEMFRLFLKTIREYHPEIVFSSMEAIMARVIEESDDISLGLLY 206
Query: 195 PLLATFKKDNEEVSPIALQLVERVLENCATKL 226
P+L KKDN+ VSPIA +L + VL+ CATKL
Sbjct: 207 PILDCVKKDNKVVSPIARKLGKSVLQKCATKL 238
>IMGA|AC174319_32.5 T24D18.4 , related chr04_pseudomolecule_IMGAG_V2
552630-557546 E EGN_Mt071002 20080227
Length = 835
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 162/220 (73%), Gaps = 1/220 (0%)
Query: 43 IEQTPNESMQTALSPTLKALTGEIFLKHSDADVKVAVASCLSEITRITAPDAPYDDDEMK 102
++Q P E +Q +L +K L + LKH+D DVK++V +CL+EI RITAP+ PYDD+ MK
Sbjct: 46 LDQNPPEPIQESLVLPMKTLISDELLKHTDEDVKISVTACLTEIARITAPNDPYDDENMK 105
Query: 103 EVFQLIVSSFENLHDKSSRSYAKKLSMLETVAKVRSCVVMLDLECDHLILEMFQHFLKEI 162
E F+L V++FENL S R Y K L++LE ++K++ ++MLDLECD L++EMFQ FL+ I
Sbjct: 106 EFFKLTVAAFENLSHVSGRRYEKALTILEKISKIKIFLIMLDLECDDLVIEMFQQFLRII 165
Query: 163 REHHPEDVFSSMETVMTLVLEESEDISMDLLCPLLATFKKDNEEVSPIALQLVERVLENC 222
R +HP V SME VMT +L+ESEDIS DLL PLL + +K+N+ +SPI+ L E+V+ NC
Sbjct: 166 RSNHPSSVIESMEIVMTGILDESEDISSDLLRPLLDSVRKENQTISPISWTLGEKVITNC 225
Query: 223 ATKLQPYLVQAVKTLGISVDD-SKILAKICQDASDSFEKN 261
A KL+PYL++AV++ G ++++ ++ + IC + S+S E+N
Sbjct: 226 AVKLKPYLMKAVESSGRALNEYAETITSICHNKSESPERN 265
>IMGA|AC149032_41.5 HEAT chr02_pseudomolecule_IMGAG_V2
7253480-7263031 E EGN_Mt071002 20080227
Length = 884
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 147/213 (69%)
Query: 16 GNELADPPSSAEELLSILERVESYLSKIEQTPNESMQTALSPTLKALTGEIFLKHSDADV 75
G++L PSS E L+ IL++ + L+ ++Q+P+ S ++ P L A+ LKH D DV
Sbjct: 13 GSKLQIIPSSIEVLIQILKQAATCLTDMDQSPSASALESMKPFLNAIVKSELLKHQDRDV 72
Query: 76 KVAVASCLSEITRITAPDAPYDDDEMKEVFQLIVSSFENLHDKSSRSYAKKLSMLETVAK 135
K+ VA+C+ EITRITAP+APY DD +K++FQLIVS+F L D SS S+ +++ML+T+AK
Sbjct: 73 KLLVATCVCEITRITAPEAPYSDDVLKDIFQLIVSTFSGLSDISSPSFGMEVAMLDTLAK 132
Query: 136 VRSCVVMLDLECDHLILEMFQHFLKEIREHHPEDVFSSMETVMTLVLEESEDISMDLLCP 195
RSCVVMLDLECD L+ E+F F +R+ HPE V SSM+++M ++LEESED+ DLL
Sbjct: 133 YRSCVVMLDLECDDLVNEIFNTFFAVVRDDHPESVLSSMQSIMAVLLEESEDVREDLLSI 192
Query: 196 LLATFKKDNEEVSPIALQLVERVLENCATKLQP 228
LL+ ++ +V+ A +L V++ C L+P
Sbjct: 193 LLSMLGREKRDVTAAARKLSMNVIQQCIGTLEP 225
>IMGA|AC166038_50.4 binding , related chr04_pseudomolecule_IMGAG_V2
7002814-7005447 E EGN_Mt071002 20080227
Length = 375
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 96/137 (70%), Gaps = 12/137 (8%)
Query: 126 KLSMLETVAKVRSCVVMLDLECDHLILEMFQHFLKEIREHHPEDVFSSMETVMTLVLEES 185
K +LE ++K++ ++MLDL+CD L++EMFQ+FL+ IR +HP +V SME VMT +L+ES
Sbjct: 15 KKQLLEKISKIKIYLIMLDLDCDDLVIEMFQNFLRVIRPNHPSNVIESMEIVMTGILDES 74
Query: 186 EDISMDLLCPLLATFKKDNEEVSPIALQLVERVLENCATKLQPYLVQAVKTLGISVDD-S 244
ED+S +L+ PLL + +K+N ++V+ NCA KL+ +L+QAV++ G ++D+ +
Sbjct: 75 EDVSSNLVRPLLDSVRKEN-----------QKVITNCAVKLKTHLMQAVESSGRALDEYA 123
Query: 245 KILAKICQDASDSFEKN 261
+I+ IC++ S E N
Sbjct: 124 QIITSICKNQYVSLEHN 140
>IMGA|AC166038_49.4 hypothetical protein
chr04_pseudomolecule_IMGAG_V2 7001977-7002812 F
EGN_Mt071002 20080227
Length = 49
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 59 LKALTGEIFLKHSDADVKVAVASCLSEITRITAPDAPYDDDEMKEVFQLI 108
+K L + L+H+D DVK++V +CL+EI RITAP+APY+D+ MK V LI
Sbjct: 1 MKTLISDELLRHTDDDVKISVTACLTEIARITAPNAPYNDEHMK-VLVLI 49