Miyakogusa Predicted Gene
- chr1.CM0094.140.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.CM0094.140.nc - phase: 0
(620 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|CT010504_32.4 tRNA-binding arm; Frigida-like chr03_pseudomo... 556 e-159
IMGA|AC137079_19.5 Frigida-like chr05_pseudomolecule_IMGAG_V2 34... 67 3e-11
IMGA|AC121232_26.4 Frigida-like chr03_pseudomolecule_IMGAG_V2 12... 61 1e-09
IMGA|AC202308_4.3 Peptidase S8 and S53, subtilisin, kexin, sedol... 53 3e-07
IMGA|AC155101_4.5 Peptidase S8 and S53, subtilisin, kexin, sedol... 53 3e-07
IMGA|AC202374_6.4 Frigida-like - both ends partial chr01_pseudom... 47 3e-05
>IMGA|CT010504_32.4 tRNA-binding arm; Frigida-like
chr03_pseudomolecule_IMGAG_V2 27293127-27288915 E
EGN_Mt071002 20080227
Length = 484
Score = 556 bits (1433), Expect = e-159, Method: Compositional matrix adjust.
Identities = 301/502 (59%), Positives = 361/502 (71%), Gaps = 30/502 (5%)
Query: 129 MCSRGLRRYILSHLAEVKMLGEQVPEALKSAPKPSKLVFECIGRFFLQGSKAYTKDSPMV 188
M SRGLR+YIL HL+E L E++P ALK AP+P+KLVFECIGRF+LQGSKAYT +SPM+
Sbjct: 1 MNSRGLRKYILMHLSETPSLEEKIPVALKKAPEPAKLVFECIGRFYLQGSKAYTTNSPMI 60
Query: 189 TARLASVLVLEYYLLSGRVDSEAQEEDPSLNKEASQAAVSWRKRLIVEGGVANACEIDAR 248
TAR AS+LVLEYYL+SG V+SEA+ E L EA+ AA +WRKRL+VEGGVA A E+DAR
Sbjct: 61 TARQASILVLEYYLMSGCVESEAKMER-KLKAEAADAAGAWRKRLVVEGGVAMASEMDAR 119
Query: 249 GLVLFIACYGIPIDFLNEDVWNLVRLSNPREISKALRQSQALLMRVTDIAEVMMKRGKVV 308
GL LF+AC+GI F NED+ NLVRLS P EIS LR S +L R +DIA+ MMK+GKVV
Sbjct: 120 GLTLFLACFGIHGVFRNEDIANLVRLSKPGEISHLLRVSGSLSSRCSDIAQGMMKKGKVV 179
Query: 309 DALDLAYTFGFEEKFSPKTTLTSFLYKSDEVWKKAKQDARDFPILLKEANEKYLAALKSI 368
+ALDLAYTFGFEE+FSP+T L SFL KS+EVWKKAKQ ARD P LL +AN KYL+ LKS+
Sbjct: 180 EALDLAYTFGFEERFSPQTVLNSFLQKSNEVWKKAKQ-ARDVPSLLNKANGKYLSDLKSV 238
Query: 369 VNSLEGHKVDLEELLPGWELKEKILILENDISDINKIFDDTLVNKRKMDKNNSSIKMKVP 428
+N LEGHKVD +LLP W+LK+ IL LE DI D+ + +D +KRK+DK+++S K+ P
Sbjct: 239 INCLEGHKVDFAKLLPDWKLKDTILKLEKDIRDVTEKIEDNSASKRKLDKSSASKKVSGP 298
Query: 429 EAKRTRFPVKDQPVTSPSLARLHEQRFASHMDG-----SLTPNFVDGRLYGHP-NYPSAA 482
+ KRTR V+D + SPS+ L Q A HMDG SLT +F++GR YG+P NY + A
Sbjct: 299 DTKRTRHTVRDPYMASPSVTTLQRQMIAGHMDGSSYDSSLTAHFLEGRSYGYPNNYSTVA 358
Query: 483 YAHHIGSVSGSLPESYHGSAVPSRVKMLGGAIADPAMSAGIGYPPSSFSGYQGDAMVDNV 542
A IGSVSGSLPE Y G V +GGAI P SGYQ D +DNV
Sbjct: 359 SAAQIGSVSGSLPEGYLGRGVS-----IGGAIGGP------------LSGYQSDMPIDNV 401
Query: 543 G----SKSYLY-RWQGIEEGSHPYDRSVGQSFVGQPSPAQVNHLYGRTSAEGLAGLPDHL 597
G S S LY R +EG+ Y RSV SFVGQPS A+VNH+YGRTSAEG AGLPDH
Sbjct: 402 GTTLNSSSSLYSRLHSADEGALSYGRSVEPSFVGQPSSARVNHMYGRTSAEGYAGLPDHH 461
Query: 598 PVGVPSRSRVSDLYSFADSVFD 619
+GVPS SDLYSFADSVFD
Sbjct: 462 SIGVPSHGGGSDLYSFADSVFD 483
>IMGA|AC137079_19.5 Frigida-like chr05_pseudomolecule_IMGAG_V2
34568050-34571259 E EGN_Mt071002 20080227
Length = 644
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 159/419 (37%), Gaps = 90/419 (21%)
Query: 35 DDGGAQLAKSVNELTDLATAIQAFKSRYDELQRHLNYIERTIDTRTKELQS--------- 85
D+ L K+ ++L ++ + +F + ++ H + T+ R LQS
Sbjct: 16 DNKKENLKKAYDDLQSHSSHLSSFPLSWPDIDSHFTTLHNTLSQRFLHLQSLESQFQQNH 75
Query: 86 ----------RTPKPAVEKVTVVNGDVSRAELKTKAEGDVKGEENEL---VSLCQTMCSR 132
T KP + + +N D S T G V G L +LC+ +
Sbjct: 76 NDPSISSSKLSTTKPKNQNFSSINNDPSSNSNPTIQNGAVSGSITHLEGLSALCKKNDGK 135
Query: 133 GLRRYILSHLAEVKMLGEQVPEALKSAPKPSKLVFECIGRFFLQGSKAYTKDSPMVTARL 192
GLR +I + + + +++ A K A P+ +V + + F + K+ P + R
Sbjct: 136 GLRDFIRVNFKDKVTIKDELQIAFKCASNPADMVLDALDGVFGANAVVDGKELPRLNKRS 195
Query: 193 ASVLVLEYYLLSGRVDSEAQEEDPSLNKEASQAAVSWRKRLIVEGGVANAC--------- 243
+ L + + S V + + K+A + W+ L+ + V +C
Sbjct: 196 CNFLFQQLRVFSPYVSFDVR-------KKAKRLFSLWKVNLVND--VHESCWTMAFLQFV 246
Query: 244 --------------------------------------EIDARGLVLFIACYGIPIDFLN 265
+ G+V F++ Y DFL+
Sbjct: 247 AVYDFLPELNVGELAAYSATAATNDELPDLYQIIALSDRVQGAGIVQFLSVY----DFLS 302
Query: 266 E-DVWNLVRLSNPREISKA---LRQSQALLMRVTDIAEVMMKRGKVVDALDLAYTFGFEE 321
E +V L S + L Q AL RV D+ + +++RGK + A+ + F E
Sbjct: 303 ELNVGELAAYSATAATNDELLDLYQIIALSDRVQDVIQKLIERGKQILAVKFIFHFKLTE 362
Query: 322 KFSPKTTLTSFLYKSDEVWKKAKQDARDFPILLKEANEKYLAALKSIVNSLEGHKVDLE 380
K P L +++ ++++ K+ + + L E + + ALKS++ +E + +D E
Sbjct: 363 KTPPVPVLKAYVNDAEKLAKRLASEGKS----LNEIKSREIHALKSVIKVIESYNLDSE 417
>IMGA|AC121232_26.4 Frigida-like chr03_pseudomolecule_IMGAG_V2
12534744-12538967 E EGN_Mt071002 20080227
Length = 525
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 160/370 (43%), Gaps = 30/370 (8%)
Query: 60 SRYDELQRHLNYIERTIDTRTKELQSRTPKPAVEKVTVVNGDVSRAELKTKAEGDVKGEE 119
S + LQ+ L + + + + ++ QSRT ++ N + S+ + D
Sbjct: 45 SHFTSLQQSLTHRFQFLQSLEQQSQSRT------LISNSNAETSKKTNFSTNPKDPISHR 98
Query: 120 NELVSLCQTMCSRGLRRYILSHLAEVKMLGEQVPEALKSAPKPSKLVFECIGRFFLQGSK 179
EL LC+ + GLR YI + + + ++ E +SAP ++V + + F+ + S
Sbjct: 99 KELRVLCEKIDGIGLRNYIDKNYKDKIRVEAELLEEFRSAPDAGEMVLQSLEGFY-RVSG 157
Query: 180 AYTKDSPMVTARLASVLVLEYYLLSGRVDSEAQEEDPSLNKEASQAAVSWRKRLIVEGGV 239
+ R+ +L+ + V +A+E +A + A+ W+ RL+ + G
Sbjct: 158 NFNDRVLRKMGRICVMLLKVLSVAGVNVSGKARE-------KALKLAIDWKVRLLGDHGN 210
Query: 240 ANACEIDARGLVLFIACYGIPIDFLNEDVWNLVRLSNPREISKALRQ---SQALLMRVTD 296
+ A G + + +GI +F + LV + I+ Q +V +
Sbjct: 211 I----LGALGFLYLVYGFGIVSEFRG---YVLVEFAARAAINGEFMQLCRDIGFTDKVPE 263
Query: 297 IAEVMMKRGKVVDALDLAYTFGFEEKFSPKTTLTSFLYKSDEVWKKAKQDARDFPILLKE 356
I + ++++GK V A+ + F +K P L + + +S ++ ++ ++ + E
Sbjct: 264 IVQKLVEKGKHVLAVKFVFEFSLADKIPPVPILKAAVDESRKLARRRSEEGKR----RME 319
Query: 357 ANEKYLAALKSIVNSLEGHKVDLEELLPGWELKEKILILENDISDINKIFDDTLVNKRKM 416
++ L LK ++ +E HK LE P L+++I L+ ++ +++N+ +
Sbjct: 320 ITDRELRVLKRVIEIIEIHK--LESEYPRDSLEQRIEQLKGQDPNMKDRTPASILNQHTL 377
Query: 417 DKNNSSIKMK 426
+ +MK
Sbjct: 378 QRRQQKRRMK 387
>IMGA|AC202308_4.3 Peptidase S8 and S53, subtilisin, kexin,
sedolisin; Frigida-like chr04_pseudomolecule_IMGAG_V2
37135685-37140134 F EGN_Mt071002 20080227
Length = 539
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 153/359 (42%), Gaps = 43/359 (11%)
Query: 46 NELTDLATAIQAFKSRYDELQRHLNYIE-------RTIDTRTKELQSRTPKPAVEKVTVV 98
NEL + + +L H ++++ +T+D++ + L+SR K +E +
Sbjct: 22 NELESQKNTLIKCTDLFTKLNNHFSFLQDSISQKFQTLDSQFQSLESRH-KETLESLANQ 80
Query: 99 NGDVSRAELKTKAEGDVKGEEN---------------ELVSLCQTMCSRGLRRYILSHLA 143
+ E A D + E L SL + M + L +++S
Sbjct: 81 ENSIPERESSAAARIDEQKEAALAALRNPNPPSNIAAALKSLSRKMDAESLLMFVISKRK 140
Query: 144 EVKMLGEQVPEALKSAPKPSKLVFECIGRFFLQGSKAYTKDSPMVTARLASVLVLEYYLL 203
E ML ++ ALK A +LV + + + ++ S + R A L+++ +
Sbjct: 141 ESIMLRPEIAAALKEAVDAPRLVLDAVEEYLTCKTEG---KSGVTDKRWACGLLIQGLI- 196
Query: 204 SGRVDSEAQEEDPSLNKEASQAAVSWRKRLIVEGGVANACEIDARGLVLF---IACYGIP 260
SE+ ++ + A W+++L E E A +V+F + C+G+
Sbjct: 197 -----SESSVYSRTIVERAGSLLDLWKEQLDGEP------EKGAAEMVMFLQMVVCFGLR 245
Query: 261 IDFLNEDVW-NLVRLSNPREISKALRQSQALLMRVTDIAEVMMKRGKVVDALDLAYTFGF 319
+E + ++++ ++ R+++K + S ++ DI + ++K GK ++A+ A G
Sbjct: 246 SKVDDEYLRKSVMKFASRRDMAK-VAASLEFGDKMIDIIDELVKNGKEMEAVYFASESGL 304
Query: 320 EEKFSPKTTLTSFLYKSDEVWKKAKQDARDFPILLKEANEKYLAALKSIVNSLEGHKVD 378
E+F P L S++ + + + + EAN L ++K ++ +E HK++
Sbjct: 305 TERFKPIELLNSYVRNYENNVATILKSGNNSQVATDEANTLELTSIKDVIKCVEDHKLE 363
>IMGA|AC155101_4.5 Peptidase S8 and S53, subtilisin, kexin,
sedolisin; Frigida-like chr04_pseudomolecule_IMGAG_V2
37090380-37094828 F EGN_Mt071002 20080227
Length = 539
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 153/359 (42%), Gaps = 43/359 (11%)
Query: 46 NELTDLATAIQAFKSRYDELQRHLNYIE-------RTIDTRTKELQSRTPKPAVEKVTVV 98
NEL + + +L H ++++ +T+D++ + L+SR K +E +
Sbjct: 22 NELESQKNTLIKCTDLFTKLNNHFSFLQDSISQKFQTLDSQFQSLESRH-KETLESLANQ 80
Query: 99 NGDVSRAELKTKAEGDVKGEEN---------------ELVSLCQTMCSRGLRRYILSHLA 143
+ E A D + E L SL + M + L +++S
Sbjct: 81 ENSIPERESSAAARIDEQKEAALAALRNPNPPSNIAAALKSLSRKMDAESLLMFVISKRK 140
Query: 144 EVKMLGEQVPEALKSAPKPSKLVFECIGRFFLQGSKAYTKDSPMVTARLASVLVLEYYLL 203
E ML ++ ALK A +LV + + + ++ S + R A L+++ +
Sbjct: 141 ESIMLRPEIAAALKEAVDAPRLVLDAVEEYLTCKTEG---KSGVTDKRWACGLLIQGLI- 196
Query: 204 SGRVDSEAQEEDPSLNKEASQAAVSWRKRLIVEGGVANACEIDARGLVLF---IACYGIP 260
SE+ ++ + A W+++L E E A +V+F + C+G+
Sbjct: 197 -----SESSVYSRTIVERAGSLLDLWKEQLDGEP------EKGAAEMVMFLQMVVCFGLR 245
Query: 261 IDFLNEDVW-NLVRLSNPREISKALRQSQALLMRVTDIAEVMMKRGKVVDALDLAYTFGF 319
+E + ++++ ++ R+++K + S ++ DI + ++K GK ++A+ A G
Sbjct: 246 SKVDDEYLRKSVMKFASRRDMAK-VAASLEFGDKMIDIIDELVKNGKEMEAVYFASESGL 304
Query: 320 EEKFSPKTTLTSFLYKSDEVWKKAKQDARDFPILLKEANEKYLAALKSIVNSLEGHKVD 378
E+F P L S++ + + + + EAN L ++K ++ +E HK++
Sbjct: 305 TERFKPIELLNSYVRNYENNVATILKSGNNSQVATDEANTLELTSIKDVIKCVEDHKLE 363
>IMGA|AC202374_6.4 Frigida-like - both ends partial
chr01_pseudomolecule_IMGAG_V2 29997582-29998475 E
EGN_Mt071002 20080227
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 83/212 (39%), Gaps = 24/212 (11%)
Query: 54 AIQAFKSRYDELQRHLNYIERTIDTRTKELQSRTPKPAVEKVTVVNGDVSRAELKTKAEG 113
++ + R L L R ID RT+ A+ ++ V DV +G
Sbjct: 70 SLNLLRHRESTLDDALQIALRDIDNRTE--------AALAALSRVREDVE------DGDG 115
Query: 114 DVKGEEN---ELVSLCQTMCSRGLRRYILSHLAEVKMLGEQVPEALKSAPKPSKLVFECI 170
+V E +L S C M + G +++ E++ L ++PEAL P+K V E I
Sbjct: 116 EVDNGEGLMLKLKSFCLKMDALGFWGFVIGKKKELEGLRAEMPEALGECIDPAKFVLEAI 175
Query: 171 GRFFLQGSKAYTKDSPMVTARLASVLVLEYYLLSGRVDSEAQEE---DPSLNKEASQAAV 227
F + D A VLVLE L+ VD + P++ K A A
Sbjct: 176 SEVFPVDKRG---DKSGNDLGWACVLVLE-SLVPVMVDPVLKSRMLVTPTVKKLAKDVAE 231
Query: 228 SWRKRLIVEGGVANACEIDARGLVLFIACYGI 259
W+ L GGV N D + + +GI
Sbjct: 232 KWKVSLEERGGVENVKTPDVHTFLQHLVTFGI 263