Miyakogusa Predicted Gene
- chr3.CM0115.260.nc
BLASTN 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr3.CM0115.260.nc + phase: 0
(2532 letters)
Database: lotus_consensus
8469 sequences; 5,164,774 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KMC019310A_C01 KMC019310A_c01 1929 0.0
KMC014315A_C01 KMC014315A_c01 821 0.0
KMC000506A_C06 KMC000506A_c06 817 0.0
KMC000759A_C01 KMC000759A_c01 436 e-122
KMC002772A_C01 KMC002772A_c01 280 6e-75
KMC000731A_C01 KMC000731A_c01 143 1e-33
KMC005778A_C01 KMC005778A_c01 96 2e-19
KMC012498A_C01 KMC012498A_c01 82 3e-15
KMC002843A_C01 KMC002843A_c01 82 3e-15
KMC001175A_C01 KMC001175A_c01 74 7e-13
KMC005439A_C01 KMC005439A_c01 54 7e-07
>KMC019310A_C01 KMC019310A_c01
Length = 1280
Score = 1929 bits (973), Expect = 0.0
Identities = 1020/1033 (98%), Gaps = 12/1033 (1%)
Strand = Plus / Plus
Query: 746 agtcatcagattttcttacatatggaataaaatctttatctcagagcgtgttgcctttgt 805
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 1 agtcatcagattttcttacatatggaataaaatctttatctcagagcgtgt-gcctt-gt 58
Query: 806 tcaaatctgtgattttcgatttgaacttcacgccgaatgagtttgatagcttcgatgaag 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 tcaaatctgtgattttcgatttgaacttcacgccgaatgagtttgatagcttcgatgaag 118
Query: 866 tgcgtggactctatgaaggtggaattaaacttcctacaaatataatcagccaaatcagcc 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tgcgtggactctatgaaggtggaattaaacttcctacaaatataatcagccaaatcagcc 178
Query: 926 ctttgcctgttcttaaggaaatctttcgcactgatggtgaaaatgtccttcaatttccac 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ctttgcctgttcttaaggaaatctttcgcactgatggtgaaaatgtccttcaatttccac 238
Query: 986 cacctcatgtaatccgagttagcaagtctgcatggatgactgatgttgaatttggaagag 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 cacctcatgtaatccgagttagcaagtctgcatggatgactgatgttgaatttggaagag 298
Query: 1046 agatgattgctggtgttaatcctaatgtgattcgtttgctacaagtaagttcaaatttcc 1105
||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 299 agatgattgctggtgttaatcctaatgtgattcgtttgctacaag---------agttcc 349
Query: 1106 caccaaaaagcacgctagatgtcaatggttttggtgatcaaaatagtacactaacaaaag 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 caccaaaaagcacgctagatgtcaatggttttggtgatcaaaatagtacactaacaaaag 409
Query: 1166 aacacttggagattaaccttggtgggctcacagtagatgaggcgcttggcgctaagagat 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aacacttggagattaaccttggtgggctcacagtagatgaggcgcttggcgctaagagat 469
Query: 1226 tgttcatactagattaccatgatgctttcatgccttatttggagaagataaacaaacttc 1285
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 -gttcatactagattaccatgatgctttcatgccttatttggagaagataaacaaacttc 528
Query: 1286 catcctcaaaggcttatgccaccagaacaatcctgttcttgaaagatgatggggctttaa 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 catcctcaaaggcttatgccaccagaacaatcctgttcttgaaagatgatggggctttaa 588
Query: 1346 ccccacttgccattgagttgagtctaccacatccaaatggagttaaatatggtgctgaaa 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ccccacttgccattgagttgagtctaccacatccaaatggagttaaatatggtgctgaaa 648
Query: 1406 gcaaagtcgtcttacccgctaaagaaggtgctgaaggaacaatttggctactggccaagg 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gcaaagtcgtcttacccgctaaagaaggtgctgaaggaacaatttggctactggccaagg 708
Query: 1466 ctcatgttattgtgaatgactcaggctatcatcaactcattacccactggttaaatactc 1525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ctcatgttattgtgaatgactcaggctatcatcaactcattacccactggttaaatactc 768
Query: 1526 atgcaacgattgagccgttcgccatagcaacaaacagacatctcagtgcccttcacccta 1585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 atgcaacgattgagccgttcgccatagcaacaaacagacatctcagtgcccttcacccta 828
Query: 1586 ttaacaagctcttatatcctcactaccgtgacacaataaatatcaacgcacttgctagag 1645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 ttaacaagctcttatatcctcactaccgtgacacaataaatatcaacgcacttgctagag 888
Query: 1646 catccctgattaatgcagaaggcattatcgagcaatcatttttgcctggagagtactctt 1705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 catccctgattaatgcagaaggcattatcgagcaatcatttttgcctggagagtactctt 948
Query: 1706 tggagatttcttctgtagtttacaagaattgggttttccctgaccaagcattaccagctg 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 tggagatttcttctgtagtttacaagaattgggttttccctgaccaagcattaccagctg 1008
Query: 1766 atttaattaagag 1778
|||||||||||||
Sbjct: 1009 atttaattaagag 1021
Score = 377 bits (190), Expect = e-104
Identities = 190/190 (100%)
Strand = Plus / Plus
Query: 1777 agaggaatggcagttgaggatccctctgccccccatggtgttcgccttgtgttagaggac 1836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 agaggaatggcagttgaggatccctctgccccccatggtgttcgccttgtgttagaggac 1150
Query: 1837 tacccttatgctgttgacggacttgagatatgggatgctattaagaagtgggttcaagac 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 tacccttatgctgttgacggacttgagatatgggatgctattaagaagtgggttcaagac 1210
Query: 1897 tacgtctccttatattacccaagtgatgatgcagtccagaaagacactgaactacaagct 1956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 tacgtctccttatattacccaagtgatgatgcagtccagaaagacactgaactacaagct 1270
Query: 1957 tggtggaagg 1966
||||||||||
Sbjct: 1271 tggtggaagg 1280
>KMC014315A_C01 KMC014315A_c01
Length = 618
Score = 821 bits (414), Expect = 0.0
Identities = 425/428 (99%), Gaps = 3/428 (0%)
Strand = Plus / Plus
Query: 66 cgttgccggccaagtggttgatggcgccaccgccatcctcagccgtaacatccatgtcca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cgttgccggccaagtggttgatggcgccaccgccatcctcagccgtaacatccatgtcca 253
Query: 126 attgatcagtgctaccaaaactaatggtccaagtggagttgggttacttggagaggaaac 185
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 254 attgatcagtgctaccaaaactaatg---caagtggagttgggttacttggagaggaaac 310
Query: 186 ctttctgcagaaacatattccctcattaccaaccttgggagcgaggcaggaggcatacag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctttctgcagaaacatattccctcattaccaaccttgggagcgaggcaggaggcatacag 370
Query: 246 cgtcgaatttgattacgatgccaatttcggaattcctggagcattttacatcaaaaacta 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cgtcgaatttgattacgatgccaatttcggaattcctggagcattttacatcaaaaacta 430
Query: 306 tatgcaatgcgagttcttccttgtcagcttgaccctcgaagacattcccaatcacggaac 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tatgcaatgcgagttcttccttgtcagcttgaccctcgaagacattcccaatcacggaac 490
Query: 366 cattcgctttgattgcaactcatgggtttacaactttaaattatacaataacaggcatcg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cattcgctttgattgcaactcatgggtttacaactttaaattatacaataacaggcatcg 550
Query: 426 cattttctttaccaatgatacatatctcccaggtcaaacaccagcaggacttgttaaata 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cattttctttaccaatgatacatatctcccaggtcaaacaccagcaggacttgttaaata 610
Query: 486 cagaaaag 493
||||||||
Sbjct: 611 cagaaaag 618
Score = 129 bits (65), Expect = 1e-29
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 1 atgtttggcatctttgacaagagcaaaaagatcaagggcactttggtgttgatgcccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 atgtttggcatctttgacaagagcaaaaagatcaagggcactttggtgttgatgcccaaa 107
Query: 61 aatgt 65
|||||
Sbjct: 108 aatgt 112
>KMC000506A_C06 KMC000506A_c06
Length = 2176
Score = 817 bits (412), Expect = 0.0
Identities = 722/824 (87%), Gaps = 1/824 (0%)
Strand = Plus / Minus
Query: 1708 gagatttcttctgtagtttacaaga-attgggttttccctgaccaagcattaccagctga 1766
||||| ||||| | |||||||||| ||||||| || ||||||||||||||||||||||
Sbjct: 1013 gagatgtcttcagcagtttacaagggattgggtctttactgaccaagcattaccagctga 954
Query: 1767 tttaattaagagaggaatggcagttgaggatccctctgccccccatggtgttcgccttgt 1826
| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 953 tcttattaagagaggaatggctgttgaggatccctctgccccccatggtgttcgccttgt 894
Query: 1827 gttagaggactacccttatgctgttgacggacttgagatatgggatgctattaagaagtg 1886
||||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||
Sbjct: 893 tgtagaggactacccttatgctgttgatggactagagatttgggatgctattacgaagtg 834
Query: 1887 ggttcaagactacgtctccttatattacccaagtgatgatgcagtccagaaagacactga 1946
||||||||| || ||||| ||||||||||||| ||||||||||| |||||||||||||
Sbjct: 833 ggttcaagagtatgtctctttatattacccaacagatgatgcagttaagaaagacactga 774
Query: 1947 actacaagcttggtggaaggaagttgtgcaaagggctcatgctgacttgagcgacaagcc 2006
|||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 773 gctacaaacttggtggaaagaagttgtgcaaagaggtcatgctgacttgagcgacaagcc 714
Query: 2007 atggtggccaaagatgcaaactcttgaagaattgattcaatcttgctctatcatcatatg 2066
||||||||| ||||||||||||||| |||| |||||| |||| |||||||| ||||||||
Sbjct: 713 atggtggcctaagatgcaaactcttcaagagttgattaaatcctgctctattatcatatg 654
Query: 2067 gatcgcttcggctcttcatgcagctgttaatttcggacaatatccttatggaggttatat 2126
|| |||||||||||||| || ||||||||||| ||||||||||| |||||||||| ||
Sbjct: 653 gactgcttcggctcttcacgctgctgttaattttggacaatatccatatggaggtttaat 594
Query: 2127 cctgaaccggcctacactgagcagaagatggatcccggaaaatggaactccggaatatga 2186
| | ||||| || ||| | |||||||||| |||||| ||| |||||||| || |||||
Sbjct: 593 cattaaccgtccaacaatcagcagaagattgatcccagaaccaggaactccagagtatga 534
Query: 2187 tgagatggtgaaaaatcctcagaaggcttacttgagaaccatcacaccgaagtaccagac 2246
|||||||||||||| |||||| ||||||||||| |||||||| || || ||||| ||||
Sbjct: 533 tgagatggtgaaaagtcctcaaaaggcttacttaagaaccattacgccaaagtatgagac 474
Query: 2247 tcttgttgatctttctgtgatagagatattgtctaggcatgcttctgatgagatctatct 2306
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 473 tcttattgatcttactgtgatagagatattgtctaggcatgcttctgatgagatctacct 414
Query: 2307 tggggagagggagaatccaaattggacatctgatacaagggcaatacaagccttcaaaaa 2366
||||||||||||||||||| | |||||||||||||||| ||||| |||||||||| ||||
Sbjct: 413 tggggagagggagaatccagaatggacatctgatacaaaggcaaaacaagccttccaaaa 354
Query: 2367 gtttggaaccaagctgcaagaaattgaagggaatatcaatgcgaggaacaaggattcttg 2426
|||||||| ||||||| ||| ||||||| || ||||||| ||||||||| ||||| |
Sbjct: 353 gtttggaagcaagctggcagagattgaagcaaaaatcaatgggaggaacaatgattcaag 294
Query: 2427 tttgctaaaccgaactgggcctattgagctaccctacagtttgctccttcgttctagtga 2486
|||| ||||||| |||||| | | || ||||||| | ||||||||||||| ||| |
Sbjct: 293 tttgaaaaaccgatttgggccagctcaactgccctacactctgctccttcgttccagtaa 234
Query: 2487 ggaagggttgacatgtagaggaattcccaacagtatctctattt 2530
||||||||| || | ||||||||||||||||| ||||||||||
Sbjct: 233 ggaagggttaactttcagaggaattcccaacagcatctctattt 190
Score = 236 bits (119), Expect = 9e-62
Identities = 190/214 (88%), Gaps = 6/214 (2%)
Strand = Plus / Minus
Query: 1157 taacaaaagaacacttggagattaaccttggtgggctcacagtagatgaggcgcttggcg 1216
||||||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |
Sbjct: 1537 taacaaaagaaaacttggagattaaccttggggggctcacagtagaggaggcacttggtg 1478
Query: 1217 ctaagagattgttcatactagattaccatgatgctttcatgccttatttggagaagataa 1276
|| |||||||||||||||||||||||||||||| ||| |||||||| |||||| |||||
Sbjct: 1477 ctcagagattgttcatactagattaccatgatgtgttcctgccttatgtggagaggataa 1418
Query: 1277 acaaacttccatcctcaaaggcttatgccaccagaacaatcctgttcttgaaagatgatg 1336
||||| || |||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 1417 acaaaatt------aaaaaggcttatgccaccaggacaatcctattcttgaaagatgatg 1364
Query: 1337 gggctttaaccccacttgccattgagttgagtct 1370
|||||||||| ||||||||||| |||||||||||
Sbjct: 1363 gggctttaacaccacttgccatcgagttgagtct 1330
Score = 188 bits (95), Expect = 2e-47
Identities = 194/227 (85%)
Strand = Plus / Minus
Query: 1447 atttggctactggccaaggctcatgttattgtgaatgactcaggctatcatcaactcatt 1506
||||||||| |||| |||||| |||| ||||| |||||||| |||||||||| |||||
Sbjct: 1274 atttggctattggctaaggcttatgtaattgtaaatgactcttgctatcatcagctcatg 1215
Query: 1507 acccactggttaaatactcatgcaacgattgagccgttcgccatagcaacaaacagacat 1566
| ||| |||||||||||||||||| ||| ||||| || | |||||||||||| ||||||
Sbjct: 1214 agccattggttaaatactcatgcagtgatggagccatttgtcatagcaacaaatagacat 1155
Query: 1567 ctcagtgcccttcaccctattaacaagctcttatatcctcactaccgtgacacaataaat 1626
||||||| ||||||||||||| | ||||| ||| ||||||| ||||||||||||||||||
Sbjct: 1154 ctcagtgtccttcaccctatttataagcttttacatcctcattaccgtgacacaataaat 1095
Query: 1627 atcaacgcacttgctagagcatccctgattaatgcagaaggcattat 1673
|| || | ||||||| ||| ||| |||||||||||| ||||||||
Sbjct: 1094 ataaatggacttgctcgagagtccttgattaatgcaggtggcattat 1048
Score = 147 bits (74), Expect = 6e-35
Identities = 201/241 (83%), Gaps = 8/241 (3%)
Strand = Plus / Minus
Query: 548 ggatttatgactatgatgtttacaatg-atttgggaaatccagatggtggtg-cac---- 601
|||| ||||| |||||||||||||||| | |||||||||||||||||||||| ||
Sbjct: 2145 ggatctatgattatgatgtttacaatggagttgggaaatccagatggtggtgacaagttt 2086
Query: 602 --ctcgcccaacccttggagggtctgccgaacttccctatcctcgcagggtcagaaccgg 659
||||||||||||||||||| |||||| | |||||| ||||||||||| ||||| ||
Sbjct: 2085 ggctcgcccaacccttggaggctctgccaattatccctaccctcgcagggttagaactgg 2026
Query: 660 tagaaaatctaccaggacaaatcgtgcagctgagaagccagctgtggacatctatgtccc 719
|||| || | ||||| | | ||| | || ||||||||| |||||| | | ||||| ||
Sbjct: 2025 tagacaaccaaccagaaaagatcctacatgtgagaagcctgctgtgcagttgtatgtgcc 1966
Query: 720 aagagatgaaaattttggtcacttgaagtcatcagattttcttacatatggaataaaatc 779
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 1965 aagagatgaaaattttggtcacttgaagtcatcagatttccttggttatggaataaaatc 1906
Query: 780 t 780
|
Sbjct: 1905 t 1905
Score = 133 bits (67), Expect = 9e-31
Identities = 85/91 (93%)
Strand = Plus / Minus
Query: 987 acctcatgtaatccgagttagcaagtctgcatggatgactgatgttgaatttggaagaga 1046
||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1698 acctcatgttatccaagttagcaagtctgcatggatgactgatgaagaatttggaagaga 1639
Query: 1047 gatgattgctggtgttaatcctaatgtgatt 1077
|||||||||||| || |||||||||||||||
Sbjct: 1638 gatgattgctggagtaaatcctaatgtgatt 1608
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 844 gagtttgatagcttcgatgaagtgcgtggactctatgaaggtggaatt 891
||||| |||||||||||||| ||||||| |||| |||||||||||||
Sbjct: 1841 gagttcgatagcttcgatgaggtgcgtgatctctttgaaggtggaatt 1794
>KMC000759A_C01 KMC000759A_c01
Length = 514
Score = 436 bits (220), Expect = e-122
Identities = 343/384 (89%)
Strand = Plus / Minus
Query: 2147 gcagaagatggatcccggaaaatggaactccggaatatgatgagatggtgaaaaatcctc 2206
||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||
Sbjct: 514 gcagaagattgatcccagaaaaaggaactccagaatatgatgagatggttaaaaatcctc 455
Query: 2207 agaaggcttacttgagaaccatcacaccgaagtaccagactcttgttgatctttctgtga 2266
| ||||||||| | |||||||||||||| ||||||||| |||||||||| ||||||||||
Sbjct: 454 aaaaggcttacctcagaaccatcacaccaaagtaccaggctcttgttgacctttctgtga 395
Query: 2267 tagagatattgtctaggcatgcttctgatgagatctatcttggggagagggagaatccaa 2326
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 394 tagagatattgtctaggcatgcttctgatgagatctaccttggggagagggagaatccaa 335
Query: 2327 attggacatctgatacaagggcaatacaagccttcaaaaagtttggaaccaagctgcaag 2386
|||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 334 attggacatctgattcaaaggcactacaagccttcaaaaagtttggaaccaagctgcaag 275
Query: 2387 aaattgaagggaatatcaatgcgaggaacaaggattcttgtttgctaaaccgaactgggc 2446
||||||||| ||| |||| | |||||||| ||||| ||||| |||||||| ||| |
Sbjct: 274 aaattgaagcgaaaatcacagaaaggaacaaagattcaagtttgaaaaaccgaattggcc 215
Query: 2447 ctattgagctaccctacagtttgctccttcgttctagtgaggaagggttgacatgtagag 2506
| |||| || ||||||| ||||||| ||| ||||||||||| |||||| || | ||||
Sbjct: 214 cagttgaactgccctacactttgctcgttccttctagtgaggcagggttaactttcagag 155
Query: 2507 gaattcccaacagtatctctattt 2530
||||||| ||||||||||||||||
Sbjct: 154 gaattccaaacagtatctctattt 131
>KMC002772A_C01 KMC002772A_c01
Length = 482
Score = 280 bits (141), Expect = 6e-75
Identities = 243/277 (87%)
Strand = Plus / Minus
Query: 2254 gatctttctgtgatagagatattgtctaggcatgcttctgatgagatctatcttggggag 2313
|||||||| |||||||||||||||||||||||||||||||||||| |||| ||||| ||
Sbjct: 457 gatctttcggtgatagagatattgtctaggcatgcttctgatgaggtctaccttggacag 398
Query: 2314 agggagaatccaaattggacatctgatacaagggcaatacaagccttcaaaaagtttgga 2373
||||| |||||||||||||||||||||||||||||| ||||||||||| | |||||||||
Sbjct: 397 agggacaatccaaattggacatctgatacaagggcattacaagccttccagaagtttgga 338
Query: 2374 accaagctgcaagaaattgaagggaatatcaatgcgaggaacaaggattcttgtttgcta 2433
| |||||||||||||||||||||||| |||| | |||||||| ||||| ||||| |
Sbjct: 337 agcaagctgcaagaaattgaagggaaaatcacagaaaggaacaaagattcaagtttgaaa 278
Query: 2434 aaccgaactgggcctattgagctaccctacagtttgctccttcgttctagtgaggaaggg 2493
||||||| |||||| |||| || || |||| ||||||||||| |||||||||||||||
Sbjct: 277 aaccgaattgggccagttgaactgccttacactttgctccttccttctagtgaggaagga 218
Query: 2494 ttgacatgtagaggaattcccaacagtatctctattt 2530
|| || | ||||||||||| ||||||||||||||||
Sbjct: 217 ttaactttcagaggaattccaaacagtatctctattt 181
>KMC000731A_C01 KMC000731A_c01
Length = 572
Score = 143 bits (72), Expect = 1e-33
Identities = 171/204 (83%)
Strand = Plus / Plus
Query: 196 aaacatattccctcattaccaaccttgggagcgaggcaggaggcatacagcgtcgaattt 255
||||| |||||||| ||||||||||||||||| ||||| || |||||||||||| ||
Sbjct: 316 aaacacattccctcgttaccaaccttgggagctaggcaagaagcatacagcgtctccttc 375
Query: 256 gattacgatgccaatttcggaattcctggagcattttacatcaaaaactatatgcaatgc 315
|| ||||| ||| |||||||||| || |||||||| ||| ||||||||| | || |
Sbjct: 376 gactacgacgccgatttcggaatcccaggagcattctacttcaaaaacttcacccaggac 435
Query: 316 gagttcttccttgtcagcttgaccctcgaagacattcccaatcacggaaccattcgcttt 375
||||||||| | ||||| | |||||||||||||||||||||||||||||||||| |||
Sbjct: 436 gagttcttcttcgtcagtctcaccctcgaagacattcccaatcacggaaccattcacttc 495
Query: 376 gattgcaactcatgggtttacaac 399
| |||||||| ||||||||||||
Sbjct: 496 gtctgcaactcctgggtttacaac 519
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 10 atctttgacaagagcaaaaagatcaagggcactttggtgttgatgcccaaaaatgt 65
|||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||
Sbjct: 52 atctttgacaagagtcaaaagattaagggcactgtagtgttgatgcccaaaaatgt 107
>KMC005778A_C01 KMC005778A_c01
Length = 1005
Score = 95.6 bits (48), Expect = 2e-19
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 2003 agccatggtggccaaagatgcaaactcttgaagaattgattcaatcttgctctatcatca 2062
||||||||||||||||||||||||||| |||||| |||||| |||||||| |||| || |
Sbjct: 886 agccatggtggccaaagatgcaaactcgtgaagagttgattgaatcttgcactattatta 945
Query: 2063 tatggatcgcttcggctcttcatgcagc 2090
||||| | ||||| ||||| ||||||||
Sbjct: 946 tatgggttgcttcagctctgcatgcagc 973
>KMC012498A_C01 KMC012498A_c01
Length = 646
Score = 81.8 bits (41), Expect = 3e-15
Identities = 152/189 (80%)
Strand = Plus / Plus
Query: 1434 tgctgaaggaacaatttggctactggccaaggctcatgttattgtgaatgactcaggcta 1493
|||||| || || ||||||||||| || |||||| | ||||| ||||| ||||| ||||
Sbjct: 174 tgctgatggtactatttggctacttgcaaaggcttacgttatcgtgaacgactcttgcta 233
Query: 1494 tcatcaactcattacccactggttaaatactcatgcaacgattgagccgttcgccatagc 1553
||||||||| | | ||| |||||||| |||||||| | ||||| ||| ||||||
Sbjct: 234 tcatcaacttgtcagccattggttaaacactcatgctgttgtcgagccattcatcatagc 293
Query: 1554 aacaaacagacatctcagtgcccttcaccctattaacaagctcttatatcctcactaccg 1613
||||||||| ||||| |||| |||||||||| ||||||| || | ||| ||||||||
Sbjct: 294 aacaaacaggcatcttagtgtggttcaccctatctacaagcttttgtttccccactaccg 353
Query: 1614 tgacacaat 1622
|||||||||
Sbjct: 354 tgacacaat 362
Score = 77.8 bits (39), Expect = 5e-14
Identities = 141/175 (80%)
Strand = Plus / Plus
Query: 1703 ctttggagatttcttctgtagtttacaagaattgggttttccctgaccaagcattaccag 1762
||||||| || ||| |||| | ||||||| | ||| |||| |||| |||||| |||| |
Sbjct: 443 ctttggaaatgtctgctgttgcttacaaggactggaatttcactgagcaagcactacctg 502
Query: 1763 ctgatttaattaagagaggaatggcagttgaggatccctctgccccccatggtgttcgcc 1822
| ||| || | ||||| ||| |||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 503 ccgatctactcaagaggggagtggctgttgaggatccttctgccccgcatggcattcgcc 562
Query: 1823 ttgtgttagaggactacccttatgctgttgacggacttgagatatgggatgctat 1877
| || | || || || |||||||||| ||| ||||| |||||||||||||||||
Sbjct: 563 tgctgattgaagattatccttatgctgctgatggactagagatatgggatgctat 617
>KMC002843A_C01 KMC002843A_c01
Length = 741
Score = 81.8 bits (41), Expect = 3e-15
Identities = 113/137 (82%)
Strand = Plus / Minus
Query: 2002 aagccatggtggccaaagatgcaaactcttgaagaattgattcaatcttgctctatcatc 2061
|||||||||||||| || ||||| | || || ||| |||||| || | |||| | | ||
Sbjct: 702 aagccatggtggcctaaaatgcagaatcgtgcagagttgattgaagccagctccaccctc 643
Query: 2062 atatggatcgcttcggctcttcatgcagctgttaatttcggacaatatccttatggaggt 2121
|| ||||| |||| || ||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct: 642 atttggatttcttcagcccttcacgcagctgtgaattttggacaatatccatatggaggc 583
Query: 2122 tatatcctgaaccggcc 2138
|||||||||||||||||
Sbjct: 582 tatatcctgaaccggcc 566
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 2266 atagagatattgtctaggcatgcttctgatgagatctatcttggggagag 2315
|||||| | ||||| |||||||||||||||||| | || |||||||||||
Sbjct: 441 atagaggtgttgtcaaggcatgcttctgatgagttgtaccttggggagag 392
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 2478 ttctagtgaggaagggttgacatgtagaggaattcccaacagtatctc 2525
||||||||||||||| ||||| | ||||| ||||| |||||||||||
Sbjct: 226 ttctagtgaggaaggattgactttcagaggcattcctaacagtatctc 179
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 2336 ctgatacaagggcaatacaagccttcaaaaagtttggaaccaagctg 2382
|||||||| |||| |||| |||||||| ||||||||||| ||||||
Sbjct: 368 ctgatacacaggcattacaggccttcaagaagtttggaacaaagctg 322
>KMC001175A_C01 KMC001175A_c01
Length = 569
Score = 73.8 bits (37), Expect = 7e-13
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 2182 tatgatgagatggtgaaaaatcctcagaaggcttacttgagaaccatcacaccgaagtac 2241
||||||||| |||| | ||| ||||||||||||||||||| || || ||||| |||
Sbjct: 534 tatgatgagctggtaacgaatactcagaaggcttacttgaggacaattacaccaaagctt 475
Query: 2242 cagactcttgttgatctttctgtgatagagatattgtctaggcatgcttctgatgag 2298
|| ||||| |||||||||| || || || |||||||| ||||||||||||||||||
Sbjct: 474 caaactctcattgatctttcagtcattgaaatattgtcaaggcatgcttctgatgag 418
>KMC005439A_C01 KMC005439A_c01
Length = 842
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 511 agaggagatggatcaggggagcgcaaagagcatgaaaggatttatgactatgatgtttac 570
|||||||||||| |||| |||||||| || || ||| | |||||||| |||||||||
Sbjct: 650 agaggagatggaacaggagagcgcaaggaatgggacagggtctatgactacgatgtttac 709
Query: 571 aatgatttggg 581
|||||||||||
Sbjct: 710 aatgatttggg 720
Database: lotus_consensus
Posted date: Nov 10, 2006 2:59 PM
Number of letters in database: 5,164,774
Number of sequences in database: 8469
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8861
Number of Sequences: 8469
Number of extensions: 8861
Number of successful extensions: 2479
Number of sequences better than 1.0e-03: 11
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2428
Number of HSP's gapped (non-prelim): 43
length of query: 2532
length of database: 5,164,774
effective HSP length: 17
effective length of query: 2515
effective length of database: 5,020,801
effective search space: 12627314515
effective search space used: 12627314515
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)