Miyakogusa Predicted Gene
- chr3.CM0115.140.nd
BLASTN 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr3.CM0115.140.nd + phase: 2 /pseudo/partial
(2116 letters)
Database: lotus_consensus
8469 sequences; 5,164,774 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KMC019310A_C01 KMC019310A_c01 1009 0.0
KMC000506A_C06 KMC000506A_c06 977 0.0
KMC002772A_C01 KMC002772A_c01 597 e-170
KMC000759A_C01 KMC000759A_c01 513 e-145
KMC012498A_C01 KMC012498A_c01 139 1e-32
KMC002843A_C01 KMC002843A_c01 103 7e-22
KMC005778A_C01 KMC005778A_c01 74 6e-13
KMC000731A_C01 KMC000731A_c01 72 2e-12
KMC001175A_C01 KMC001175A_c01 56 1e-07
>KMC019310A_C01 KMC019310A_c01
Length = 1280
Score = 1009 bits (509), Expect = 0.0
Identities = 902/1024 (88%), Gaps = 13/1024 (1%)
Strand = Plus / Plus
Query: 350 tcatcagatttccttacatatggactgaaatctttatctcagaacgtattgccattgttt 409
||||||||||| |||||||||||| | |||||||||||||||| ||| | ||| |||||
Sbjct: 3 tcatcagattttcttacatatggaataaaatctttatctcagagcgtgt-gcc-ttgttc 60
Query: 410 aaatctgcgatttttgatttaaacttcacgccaaatgaatttgatagcttcgaagaagtg 469
||||||| |||||| ||||| ||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 61 aaatctgtgattttcgatttgaacttcacgccgaatgagtttgatagcttcgatgaagtg 120
Query: 470 cgtcgactttatgaaggtggagttaagctccctacaaatgtactcagccaaattagccct 529
||| |||| |||||||||||| |||| || ||||||||| || |||||||||| ||||||
Sbjct: 121 cgtggactctatgaaggtggaattaaacttcctacaaatataatcagccaaatcagccct 180
Query: 530 ttaccggtccttaaggaaatcttccgcacagatggtgaaaatgtcctccaatttccgaaa 589
|| || || |||||||||||||| ||||| ||||||||||||||||| |||||||| |
Sbjct: 181 ttgcctgttcttaaggaaatctttcgcactgatggtgaaaatgtccttcaatttccacca 240
Query: 590 cctcatgtaatcagagttagtaagtctgcatggatgactgatgttgaatttggaagagag 649
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctcatgtaatccgagttagcaagtctgcatggatgactgatgttgaatttggaagagag 300
Query: 650 atgattgctggtgtaaatcctggtataatttgtttgctccaagagttcccaccaaaaagc 709
|||||||||||||| |||||| | | ||| ||||||| |||||||||||||||||||||
Sbjct: 301 atgattgctggtgttaatcctaatgtgattcgtttgctacaagagttcccaccaaaaagc 360
Query: 710 aagctagatg-ctacggtttatggtgatcaaaatagtacattaacaaaagaacacttgga 768
| |||||||| | | ||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 361 acgctagatgtcaatggttt-tggtgatcaaaatagtacactaacaaaagaacacttgga 419
Query: 769 gatcaacctgggtggactcacagtagatgaggcacttggtgctaagaggttattcatact 828
||| ||||| ||||| ||||||||||||||||| ||||| ||||||| | | ||||||||
Sbjct: 420 gattaaccttggtgggctcacagtagatgaggcgcttggcgctaaga-gatgttcatact 478
Query: 829 agattaccatgatgcattcatgccatttttggagaagataaacaaaatt------gcaaa 882
||||||||||||||| |||||||| | ||||||||||||||||||| || ||||
Sbjct: 479 agattaccatgatgctttcatgccttatttggagaagataaacaaacttccatcctcaaa 538
Query: 883 ggcttatgcaacaaggacaatcctatttttgaaagatgatggtgctttaacaccacttgc 942
||||||||| || || |||||||| || |||||||||||||| |||||||| ||||||||
Sbjct: 539 ggcttatgccaccagaacaatcctgttcttgaaagatgatggggctttaaccccacttgc 598
Query: 943 catcgaattgagtctgccacatccaaacggagttcaatatggtgctgaaagcaaagtcat 1002
||| || |||||||| ||||||||||| |||||| ||||||||||||||||||||||| |
Sbjct: 599 cattgagttgagtctaccacatccaaatggagttaaatatggtgctgaaagcaaagtcgt 658
Query: 1003 cttacctgccaacgaagatgctgaaggaacaatttggctactggccaaggctcatgttat 1062
|||||| || || |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 cttacccgctaaagaaggtgctgaaggaacaatttggctactggccaaggctcatgttat 718
Query: 1063 tgtgaatgactcgagctatcatcaagtcatgagccattggttaaatactcatgcagtgat 1122
|||||||||||| ||||||||||| |||| | ||| |||||||||||||||||| |||
Sbjct: 719 tgtgaatgactcaggctatcatcaactcattacccactggttaaatactcatgcaacgat 778
Query: 1123 ggagccattcgtcatagcaacaaacagacatctcagtgtccttcaccctattaataaact 1182
||||| |||| |||||||||||||||||||||||||| ||||||||||||||| || ||
Sbjct: 779 tgagccgttcgccatagcaacaaacagacatctcagtgcccttcaccctattaacaagct 838
Query: 1183 cttatatcctcactaccgtgacacaataaatatcaatggacttgctcg-gcaagccttag 1241
|||||||||||||||||||||||||||||||||||| | ||||||| | ||| ||| |
Sbjct: 839 cttatatcctcactaccgtgacacaataaatatcaacgcacttgctagagcatccctga- 897
Query: 1242 ttaacgcagatggcattatagaaaaatcatttttgccaggacaatattctatggagatgt 1301
|||| ||||| |||||||| || ||||||||||||| ||| | || ||| ||||||| |
Sbjct: 898 ttaatgcagaaggcattatcgagcaatcatttttgcctggagagtactctttggagattt 957
Query: 1302 catctgcagtttacaaggattgggttttcactgaccaagctttaccagctgatcttatta 1361
| |||| |||||||||| ||||||||||| |||||||||| |||||||||||| | ||||
Sbjct: 958 cttctgtagtttacaagaattgggttttccctgaccaagcattaccagctgatttaatta 1017
Query: 1362 agag 1365
||||
Sbjct: 1018 agag 1021
Score = 230 bits (116), Expect = 4e-60
Identities = 170/188 (90%)
Strand = Plus / Plus
Query: 1364 agaggaatggcaattgaggatccctctgccccctatggtcttcgccttgttgtagaggac 1423
|||||||||||| |||||||||||||||||||| ||||| |||||||||| ||||||||
Sbjct: 1091 agaggaatggcagttgaggatccctctgccccccatggtgttcgccttgtgttagaggac 1150
Query: 1424 tacccttttgctgttgacggacttgagatatgggatgctattaagacatgggttctagac 1483
||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 1151 tacccttatgctgttgacggacttgagatatgggatgctattaagaagtgggttcaagac 1210
Query: 1484 tatgtgtccttatattactcgacagatgatgaaatccagaaagacactgaactacaagat 1543
|| || |||||||||||| | | ||||||| | |||||||||||||||||||||||| |
Sbjct: 1211 tacgtctccttatattacccaagtgatgatgcagtccagaaagacactgaactacaagct 1270
Query: 1544 tggtggaa 1551
||||||||
Sbjct: 1271 tggtggaa 1278
>KMC000506A_C06 KMC000506A_c06
Length = 2176
Score = 977 bits (493), Expect = 0.0
Identities = 971/1129 (86%), Gaps = 1/1129 (0%)
Strand = Plus / Minus
Query: 989 gaaagcaaagtcatcttacctgccaacgaagatgctgaaggaacaatttggctactggcc 1048
||||||||||| ||||| ||||| || |||| | ||| | || ||||||||| ||||
Sbjct: 1319 gaaagcaaagtaatcttgcctgcaaatgaaggggttgagagtactatttggctattggct 1260
Query: 1049 aaggctcatgttattgtgaatgactcgagctatcatcaagtcatgagccattggttaaat 1108
|||||| |||| ||||| |||||||| |||||||||| ||||||||||||||||||||
Sbjct: 1259 aaggcttatgtaattgtaaatgactcttgctatcatcagctcatgagccattggttaaat 1200
Query: 1109 actcatgcagtgatggagccattcgtcatagcaacaaacagacatctcagtgtccttcac 1168
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 1199 actcatgcagtgatggagccatttgtcatagcaacaaatagacatctcagtgtccttcac 1140
Query: 1169 cctattaataaactcttatatcctcactaccgtgacacaataaatatcaatggacttgct 1228
|||||| |||| || ||| ||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 1139 cctatttataagcttttacatcctcattaccgtgacacaataaatataaatggacttgct 1080
Query: 1229 cggcaagccttagttaacgcagatggcattatagaaaaatcatttttgccaggacaatat 1288
|| | |||| |||| |||| ||||||||||||| | || ||| || |||| ||
Sbjct: 1079 cgagagtccttgattaatgcaggtggcattatagaacagtcggtttgccccggacctaat 1020
Query: 1289 tctatggagatgtcatctgcagtttacaagg-attgggttttcactgaccaagctttacc 1347
|| || |||||||| || ||||||||||||| ||||||| || ||||||||||| |||||
Sbjct: 1019 tccatagagatgtcttcagcagtttacaagggattgggtctttactgaccaagcattacc 960
Query: 1348 agctgatcttattaagagaggaatggcaattgaggatccctctgccccctatggtcttcg 1407
||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 959 agctgatcttattaagagaggaatggctgttgaggatccctctgccccccatggtgttcg 900
Query: 1408 ccttgttgtagaggactacccttttgctgttgacggacttgagatatgggatgctattaa 1467
||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||||
Sbjct: 899 ccttgttgtagaggactacccttatgctgttgatggactagagatttgggatgctattac 840
Query: 1468 gacatgggttctagactatgtgtccttatattactcgacagatgatgaaatccagaaaga 1527
|| ||||||| ||| ||||| || ||||||||| | |||||||||| | | |||||||
Sbjct: 839 gaagtgggttcaagagtatgtctctttatattacccaacagatgatgcagttaagaaaga 780
Query: 1528 cactgaactacaagattggtggaaagatgttgtacagaagggtcatgctgacttgaaaga 1587
|||||| |||||| |||||||||||| ||||| || | |||||||||||||||| ||
Sbjct: 779 cactgagctacaaacttggtggaaagaagttgtgcaaagaggtcatgctgacttgagcga 720
Query: 1588 caaggcatggtggcctaagattcaaactcttgatgagttggttgagtcgtgctctactat 1647
|||| |||||||||||||||| ||||||||| | |||||| || | || ||||||| |||
Sbjct: 719 caagccatggtggcctaagatgcaaactcttcaagagttgattaaatcctgctctattat 660
Query: 1648 catatggattgcttcagctcttcatgcagctgttaattttggacaatatccttatggagg 1707
|||||||| |||||| |||||||| || ||||||||||||||||||||||| ||||||||
Sbjct: 659 catatggactgcttcggctcttcacgctgctgttaattttggacaatatccatatggagg 600
Query: 1708 ttatatcctgaaccgcccaacactgagcaggagattgattccggaaaaaggaactccaga 1767
|| ||| | ||||| |||||| | ||||| |||||||| || ||| ||||||||||||
Sbjct: 599 tttaatcattaaccgtccaacaatcagcagaagattgatcccagaaccaggaactccaga 540
Query: 1768 atatgatgagatggtgaaaaatcctcaaaaggcttatttaagaacaatcacaccaaagtt 1827
||||||||||||||||||| ||||||||||||||| |||||||| || || |||||||
Sbjct: 539 gtatgatgagatggtgaaaagtcctcaaaaggcttacttaagaaccattacgccaaagta 480
Query: 1828 ccaggcccttcgagatctttcggtgatagagatattgtctaggcatgcttctgatgaggt 1887
|| | ||| |||||| | |||||||||||||||||||||||||||||||||||| |
Sbjct: 479 tgagactcttattgatcttactgtgatagagatattgtctaggcatgcttctgatgagat 420
Query: 1888 ctaccttggacagagggacaatccaaattggacatctgatacaagggcattacaagcctt 1947
||||||||| ||||||| |||||| | |||||||||||||||| |||| |||||||||
Sbjct: 419 ctaccttggggagagggagaatccagaatggacatctgatacaaaggcaaaacaagcctt 360
Query: 1948 ccagaagtttggaagcaagctgcaagaaattgaagggaaaatcacagaaaggaacaaaga 2007
||| |||||||||||||||||| ||| ||||||| ||||||| | |||||||| ||
Sbjct: 359 ccaaaagtttggaagcaagctggcagagattgaagcaaaaatcaatgggaggaacaatga 300
Query: 2008 ttcaagtttgaaaaaccgaattgggccagttgaactgccttacactttgctccttccttc 2067
||||||||||||||||||| ||||||||| | ||||||| |||||| ||||||||| |||
Sbjct: 299 ttcaagtttgaaaaaccgatttgggccagctcaactgccctacactctgctccttcgttc 240
Query: 2068 tagtgaggaaggattaactttcagaggaattccaaacagtatctctatt 2116
||| ||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 239 cagtaaggaagggttaactttcagaggaattcccaacagcatctctatt 191
Score = 331 bits (167), Expect = 2e-90
Identities = 338/395 (85%)
Strand = Plus / Minus
Query: 563 ggtgaaaatgtcctccaatttccgaaacctcatgtaatcagagttagtaagtctgcatgg 622
|||||||| || ||| |||||||||||||||||| ||| |||||| ||||||||||||
Sbjct: 1724 ggtgaaaacgtgctcacatttccgaaacctcatgttatccaagttagcaagtctgcatgg 1665
Query: 623 atgactgatgttgaatttggaagagagatgattgctggtgtaaatcctggtataatttgt 682
|||||||||| |||||||||||||||||||||||||| ||||||||| | | |||||
Sbjct: 1664 atgactgatgaagaatttggaagagagatgattgctggagtaaatcctaatgtgatttgc 1605
Query: 683 ttgctccaagagttcccaccaaaaagcaagctagatgctacggtttatggtgatcaaaat 742
|||||||||||||||||| |||||| || |||| | | ||||| |||| || |
Sbjct: 1604 cgtctccaagagttcccaccacgaagcaaccttgatgtcgctatctatggcgatcgaact 1545
Query: 743 agtacattaacaaaagaacacttggagatcaacctgggtggactcacagtagatgaggca 802
|||| | ||||||||||| |||||||||| ||||| || || ||||||||||| ||||||
Sbjct: 1544 agtagaataacaaaagaaaacttggagattaaccttggggggctcacagtagaggaggca 1485
Query: 803 cttggtgctaagaggttattcatactagattaccatgatgcattcatgccatttttggag 862
||||||||| |||| || |||||||||||||||||||||| ||| |||| | | |||||
Sbjct: 1484 cttggtgctcagagattgttcatactagattaccatgatgtgttcctgccttatgtggag 1425
Query: 863 aagataaacaaaattgcaaaggcttatgcaacaaggacaatcctatttttgaaagatgat 922
| ||||||||||||| |||||||||||| || |||||||||||||| ||||||||||||
Sbjct: 1424 aggataaacaaaattaaaaaggcttatgccaccaggacaatcctattcttgaaagatgat 1365
Query: 923 ggtgctttaacaccacttgccatcgaattgagtct 957
|| ||||||||||||||||||||||| ||||||||
Sbjct: 1364 ggggctttaacaccacttgccatcgagttgagtct 1330
Score = 159 bits (80), Expect = 1e-38
Identities = 189/223 (84%), Gaps = 3/223 (1%)
Strand = Plus / Minus
Query: 145 ggatctatgattatgatgtttataatg-atttgggaaatccagattctggg--ccgcttt 201
|||||||||||||||||||||| |||| | ||||||||||||||| ||| | |||
Sbjct: 2145 ggatctatgattatgatgtttacaatggagttgggaaatccagatggtggtgacaagttt 2086
Query: 202 ggctcgcccaacaattggaggctctaccacccatccttaccctcgcagggtcagaaccgg 261
|||||||||||| ||||||||||| ||| |||| |||||||||||||| ||||| ||
Sbjct: 2085 ggctcgcccaacccttggaggctctgccaattatccctaccctcgcagggttagaactgg 2026
Query: 262 tagaaaaccatgcaagaaagattctgcctgtgagaagcctgctgtggacatatatgtccc 321
|||| ||||| || |||||| || | |||||||||||||||||| | | ||||| ||
Sbjct: 2025 tagacaaccaaccagaaaagatcctacatgtgagaagcctgctgtgcagttgtatgtgcc 1966
Query: 322 aagagatgaaaattttggtcacttgaaatcatcagatttcctt 364
||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1965 aagagatgaaaattttggtcacttgaagtcatcagatttcctt 1923
>KMC002772A_C01 KMC002772A_c01
Length = 482
Score = 597 bits (301), Expect = e-170
Identities = 301/301 (100%)
Strand = Plus / Minus
Query: 1816 cacaccaaagttccaggcccttcgagatctttcggtgatagagatattgtctaggcatgc 1875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cacaccaaagttccaggcccttcgagatctttcggtgatagagatattgtctaggcatgc 423
Query: 1876 ttctgatgaggtctaccttggacagagggacaatccaaattggacatctgatacaagggc 1935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttctgatgaggtctaccttggacagagggacaatccaaattggacatctgatacaagggc 363
Query: 1936 attacaagccttccagaagtttggaagcaagctgcaagaaattgaagggaaaatcacaga 1995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 attacaagccttccagaagtttggaagcaagctgcaagaaattgaagggaaaatcacaga 303
Query: 1996 aaggaacaaagattcaagtttgaaaaaccgaattgggccagttgaactgccttacacttt 2055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaggaacaaagattcaagtttgaaaaaccgaattgggccagttgaactgccttacacttt 243
Query: 2056 gctccttccttctagtgaggaaggattaactttcagaggaattccaaacagtatctctat 2115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gctccttccttctagtgaggaaggattaactttcagaggaattccaaacagtatctctat 183
Query: 2116 t 2116
|
Sbjct: 182 t 182
>KMC000759A_C01 KMC000759A_c01
Length = 514
Score = 513 bits (259), Expect = e-145
Identities = 352/383 (91%)
Strand = Plus / Minus
Query: 1734 gcaggagattgattccggaaaaaggaactccagaatatgatgagatggtgaaaaatcctc 1793
|||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 514 gcagaagattgatcccagaaaaaggaactccagaatatgatgagatggttaaaaatcctc 455
Query: 1794 aaaaggcttatttaagaacaatcacaccaaagttccaggcccttcgagatctttcggtga 1853
|||||||||| | ||||| ||||||||||||| |||||| ||| || ||||| ||||
Sbjct: 454 aaaaggcttacctcagaaccatcacaccaaagtaccaggctcttgttgacctttctgtga 395
Query: 1854 tagagatattgtctaggcatgcttctgatgaggtctaccttggacagagggacaatccaa 1913
|||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||
Sbjct: 394 tagagatattgtctaggcatgcttctgatgagatctaccttggggagagggagaatccaa 335
Query: 1914 attggacatctgatacaagggcattacaagccttccagaagtttggaagcaagctgcaag 1973
|||||||||||||| ||| |||| ||||||||||| | |||||||||| |||||||||||
Sbjct: 334 attggacatctgattcaaaggcactacaagccttcaaaaagtttggaaccaagctgcaag 275
Query: 1974 aaattgaagggaaaatcacagaaaggaacaaagattcaagtttgaaaaaccgaattgggc 2033
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 274 aaattgaagcgaaaatcacagaaaggaacaaagattcaagtttgaaaaaccgaattggcc 215
Query: 2034 cagttgaactgccttacactttgctccttccttctagtgaggaaggattaactttcagag 2093
||||||||||||| |||||||||||| ||||||||||||||| ||| |||||||||||||
Sbjct: 214 cagttgaactgccctacactttgctcgttccttctagtgaggcagggttaactttcagag 155
Query: 2094 gaattccaaacagtatctctatt 2116
|||||||||||||||||||||||
Sbjct: 154 gaattccaaacagtatctctatt 132
>KMC012498A_C01 KMC012498A_c01
Length = 646
Score = 139 bits (70), Expect = 1e-32
Identities = 361/458 (78%)
Strand = Plus / Plus
Query: 1019 gatgctgaaggaacaatttggctactggccaaggctcatgttattgtgaatgactcgagc 1078
|||||||| || || ||||||||||| || |||||| | ||||| ||||| ||||| ||
Sbjct: 172 gatgctgatggtactatttggctacttgcaaaggcttacgttatcgtgaacgactcttgc 231
Query: 1079 tatcatcaagtcatgagccattggttaaatactcatgcagtgatggagccattcgtcata 1138
||||||||| | | |||||||||||||| |||||||| || | ||||||||| |||||
Sbjct: 232 tatcatcaacttgtcagccattggttaaacactcatgctgttgtcgagccattcatcata 291
Query: 1139 gcaacaaacagacatctcagtgtccttcaccctattaataaactcttatatcctcactac 1198
||||||||||| ||||| ||||| |||||||||| | || || || | ||| ||||||
Sbjct: 292 gcaacaaacaggcatcttagtgtggttcaccctatctacaagcttttgtttccccactac 351
Query: 1199 cgtgacacaataaatatcaatggacttgctcggcaagccttagttaacgcagatggcatt 1258
||||||||||| || || |||| ||||| ||| | | | | ||||| ||||| ||||||
Sbjct: 352 cgtgacacaatgaacattaatgcgcttgcacggaatgtcctggttaatgcagagggcatt 411
Query: 1259 atagaaaaatcatttttgccaggacaatattctatggagatgtcatctgcagtttacaag 1318
|||||| | |||| ||| ||| | ||| || |||| ||||| ||| | |||||||
Sbjct: 412 atagaatcaacattcttgtggggaaactatgctttggaaatgtctgctgttgcttacaag 471
Query: 1319 gattgggttttcactgaccaagctttaccagctgatcttattaagagaggaatggcaatt 1378
|| ||| ||||||||| ||||| |||| || ||||| | ||||| ||| |||| ||
Sbjct: 472 gactggaatttcactgagcaagcactacctgccgatctactcaagaggggagtggctgtt 531
Query: 1379 gaggatccctctgccccctatggtcttcgccttgttgtagaggactacccttttgctgtt 1438
|||||||| |||||||| |||| ||||||| | | || || || |||| ||||| |
Sbjct: 532 gaggatccttctgccccgcatggcattcgcctgctgattgaagattatccttatgctgct 591
Query: 1439 gacggacttgagatatgggatgctattaagacatgggt 1476
|| ||||| ||||||||||||||||| ||| |||||||
Sbjct: 592 gatggactagagatatgggatgctatcaagtcatgggt 629
>KMC002843A_C01 KMC002843A_c01
Length = 741
Score = 103 bits (52), Expect = 7e-22
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 1647 tcatatggattgcttcagctcttcatgcagctgttaattttggacaatatccttatggag 1706
|||| |||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 644 tcatttggatttcttcagcccttcacgcagctgtgaattttggacaatatccatatggag 585
Query: 1707 gttatatcctgaaccgcccaacactgagcagg 1738
| |||||||||||||| ||||| || ||||||
Sbjct: 584 gctatatcctgaaccggccaactcttagcagg 553
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 2043 tgccttacactttgctccttccttctagtgaggaaggattaactttcagaggaattccaa 2102
|||| |||||| ||||| ||||||||||||||||||||| ||||||||||| ||||| |
Sbjct: 248 tgccctacactctgctctatccttctagtgaggaaggattgactttcagaggcattccta 189
Query: 2103 acagtatctc 2112
||||||||||
Sbjct: 188 acagtatctc 179
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1853 atagagatattgtctaggcatgcttctgatgaggtctaccttgg 1896
|||||| | ||||| |||||||||||||||||| | ||||||||
Sbjct: 441 atagaggtgttgtcaaggcatgcttctgatgagttgtaccttgg 398
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1923 ctgatacaagggcattacaagccttccagaagtttggaa 1961
|||||||| ||||||||| |||||| ||||||||||||
Sbjct: 368 ctgatacacaggcattacaggccttcaagaagtttggaa 330
>KMC005778A_C01 KMC005778A_c01
Length = 1005
Score = 73.8 bits (37), Expect = 6e-13
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 1593 catggtggcctaagattcaaactcttgatgagttggttgagtcgtgctctactatcatat 1652
|||||||||| ||||| ||||||| ||| |||||| |||| || ||| ||| ||| ||||
Sbjct: 889 catggtggccaaagatgcaaactcgtgaagagttgattgaatcttgcactattattatat 948
Query: 1653 ggattgcttcagctcttcatgcagctgttaattttggacaatatccttatggaggtt 1709
|| ||||||||||||| |||||||| || ||||||||||| || |||| |||||
Sbjct: 949 gggttgcttcagctctgcatgcagccaccaactttggacaatacccgtatgcaggtt 1005
>KMC000731A_C01 KMC000731A_c01
Length = 572
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 17 ggatcgcattttcttcaccaacgatgcttatcttcc 52
||||||||||||||||||||||||||||||||||||
Sbjct: 537 ggatcgcattttcttcaccaacgatgcttatcttcc 572
>KMC001175A_C01 KMC001175A_c01
Length = 569
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 1841 gatctttcggtgatagagatattgtctaggcatgcttctgatgaggtctaccttgg 1896
|||||||| || || || |||||||| |||||||||||||||||| |||||||||
Sbjct: 462 gatctttcagtcattgaaatattgtcaaggcatgcttctgatgagtactaccttgg 407
Database: lotus_consensus
Posted date: Nov 10, 2006 2:59 PM
Number of letters in database: 5,164,774
Number of sequences in database: 8469
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7779
Number of Sequences: 8469
Number of extensions: 7779
Number of successful extensions: 2108
Number of sequences better than 1.0e-03: 9
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2066
Number of HSP's gapped (non-prelim): 33
length of query: 2116
length of database: 5,164,774
effective HSP length: 17
effective length of query: 2099
effective length of database: 5,020,801
effective search space: 10538661299
effective search space used: 10538661299
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)