Miyakogusa Predicted Gene
- chr6.LjT36L14.10.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr6.LjT36L14.10.nd + phase: 0 /partial
(258 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G57330.1 | Symbols: | aldose 1-epimerase family protein | ch... 431 e-121
AT3G61610.1 | Symbols: | aldose 1-epimerase family protein | ch... 367 e-102
AT5G14500.1 | Symbols: | aldose 1-epimerase family protein | ch... 360 e-100
AT3G01590.1 | Symbols: | aldose 1-epimerase family protein | ch... 351 3e-97
AT3G01590.2 | Symbols: | aldose 1-epimerase family protein | ch... 351 3e-97
AT4G23730.1 | Symbols: | aldose 1-epimerase family protein | ch... 345 1e-95
AT4G25900.1 | Symbols: | aldose 1-epimerase family protein | ch... 290 5e-79
AT5G66530.1 | Symbols: | aldose 1-epimerase family protein | ch... 112 2e-25
AT1G55370.2 | Symbols: | carbohydrate binding / catalytic | chr... 45 5e-05
>AT5G57330.1 | Symbols: | aldose 1-epimerase family protein |
chr5:23235618-23237890 FORWARD
Length = 312
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 197/256 (76%), Positives = 234/256 (91%)
Query: 1 AMFKPPKAIRGGIPICFPQFGSLGTLDSHGFARNRFWTIDNDPSPFSTNTLNKAFVDLIL 60
A+FKPPK IRGGIP+CFPQF + GTL+SHGFARNR W ++ +P P N+ + AFVDLIL
Sbjct: 57 AIFKPPKPIRGGIPLCFPQFSNFGTLESHGFARNRIWEVEANPPPLPLNSCSSAFVDLIL 116
Query: 61 KPSEEDMKIWPHSFEYRLRVALGPGGDLMLTSRVRNTSSDGKPFSFTVAHHTYFSVSDIS 120
+P+E+D+KIWP++FE+RLR+ALG G+L LTSR+RNT+SDGKPF+FT A+HTYFSVSDIS
Sbjct: 117 RPTEDDLKIWPNNFEFRLRIALGTEGELTLTSRIRNTNSDGKPFTFTFAYHTYFSVSDIS 176
Query: 121 EVRVEGLETLDYLDFLQNKERFTEQGDALTFESEVDKIYVSTPTKIAIIDHEKKRTFVLL 180
EVRVEGLETLDYLD L+++ERFTEQGDA+TFESEVDKIY+STPTKIAI+DHEKKRTFV+
Sbjct: 177 EVRVEGLETLDYLDNLKDRERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIR 236
Query: 181 KDGLPDAVVWNPWDKKAKALADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSAV 240
KDGL DAVVWNPWDKK+K ++D GD++YKHMLCVEAAAIE+PITLKPGEEWKGRLELSAV
Sbjct: 237 KDGLADAVVWNPWDKKSKTISDLGDEDYKHMLCVEAAAIERPITLKPGEEWKGRLELSAV 296
Query: 241 PSSYCSGQLDPRKVLQ 256
PSSY SGQLDP+KVL+
Sbjct: 297 PSSYSSGQLDPKKVLE 312
>AT3G61610.1 | Symbols: | aldose 1-epimerase family protein |
chr3:22810455-22812004 FORWARD
Length = 317
Score = 367 bits (941), Expect = e-102, Method: Compositional matrix adjust.
Identities = 166/251 (66%), Positives = 211/251 (84%), Gaps = 3/251 (1%)
Query: 1 AMFKPPKAIRGGIPICFPQFGSLGTLDSHGFARNRFWTIDNDPSPFSTN-TLNKAFVDLI 59
A+FKPPK++RGGI IC+PQFG G+LD HGFARN+ W ID +P P ++N +L K+FVDL+
Sbjct: 63 AIFKPPKSMRGGIQICYPQFGDCGSLDQHGFARNKIWVIDENPPPLNSNESLGKSFVDLL 122
Query: 60 LKPSEEDMKIWPHSFEYRLRVALGPGGDLMLTSRVRNTSSDGKPFSFTVAHHTYFSVSDI 119
LKPSE+D+K WPHSFE+RLRV+L GDL LTSR+RN +GKPFSF+ A+HTY SVSDI
Sbjct: 123 LKPSEDDLKQWPHSFEFRLRVSLAVDGDLTLTSRIRNI--NGKPFSFSFAYHTYLSVSDI 180
Query: 120 SEVRVEGLETLDYLDFLQNKERFTEQGDALTFESEVDKIYVSTPTKIAIIDHEKKRTFVL 179
SEVR+EGLETLDYLD L ++ TEQGDA+TFESE+D+ Y+ +P +A++DHE+KRT+V+
Sbjct: 181 SEVRIEGLETLDYLDNLSQRQLLTEQGDAITFESEMDRTYLRSPKVVAVLDHERKRTYVI 240
Query: 180 LKDGLPDAVVWNPWDKKAKALADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSA 239
K+GLPD VVWNPW+KK+K +ADFGD+EYK MLCV+ AA+E+PITLKPGEEW GRL L+A
Sbjct: 241 GKEGLPDTVVWNPWEKKSKTMADFGDEEYKSMLCVDGAAVERPITLKPGEEWTGRLILTA 300
Query: 240 VPSSYCSGQLD 250
V SS+C QL+
Sbjct: 301 VKSSFCFDQLE 311
>AT5G14500.1 | Symbols: | aldose 1-epimerase family protein |
chr5:4674506-4676371 REVERSE
Length = 306
Score = 360 bits (923), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/257 (66%), Positives = 204/257 (79%), Gaps = 4/257 (1%)
Query: 1 AMFKPPKAIRGGIPICFPQFGSLGTLDSHGFARNRFWTIDNDPSPFSTNTLNKAFVDLIL 60
A KPPKAIRGG+PI FPQFG+ G L+ HGFARNRFW++DNDPSP ++ VDL+L
Sbjct: 52 AQLKPPKAIRGGLPISFPQFGNFGALERHGFARNRFWSLDNDPSPLPPAN-QQSTVDLVL 110
Query: 61 KPSEEDMKIWPHSFEYRLRVALGPGGDLMLTSRVRNTSSDGKPFSFTVAHHTYFSVSDIS 120
K +E+D+KIWPHSFE R+R+++ PG L + RVRNT D K FSF + Y VSDIS
Sbjct: 111 KSTEDDLKIWPHSFELRVRISISPG-KLTIIPRVRNT--DTKAFSFMFSLRNYLYVSDIS 167
Query: 121 EVRVEGLETLDYLDFLQNKERFTEQGDALTFESEVDKIYVSTPTKIAIIDHEKKRTFVLL 180
EVRVEGLETLDYLD L +ERFTEQ DA+TF+ EVDK+Y++TPTKIAIIDHE+KRT L
Sbjct: 168 EVRVEGLETLDYLDNLMRRERFTEQADAITFDGEVDKVYLNTPTKIAIIDHERKRTIELR 227
Query: 181 KDGLPDAVVWNPWDKKAKALADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSAV 240
K+G+P+A VWNPWDKKAK++AD GD++Y MLCV++ AIE PI LKP EEWKGR ELS V
Sbjct: 228 KEGMPNAAVWNPWDKKAKSIADMGDEDYTTMLCVDSGAIESPIVLKPHEEWKGRQELSIV 287
Query: 241 PSSYCSGQLDPRKVLQG 257
SSYCSGQLDPRKVL G
Sbjct: 288 SSSYCSGQLDPRKVLYG 304
>AT3G01590.1 | Symbols: | aldose 1-epimerase family protein |
chr3:226654-228353 FORWARD
Length = 306
Score = 351 bits (900), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/257 (65%), Positives = 201/257 (78%), Gaps = 4/257 (1%)
Query: 1 AMFKPPKAIRGGIPICFPQFGSLGTLDSHGFARNRFWTIDNDPSPFSTNTLNKAFVDLIL 60
A +KPPKAIRGGIP+CFPQFG+ G L+ HGFARN+FW+ D DPSP ++ VDLIL
Sbjct: 52 AQYKPPKAIRGGIPVCFPQFGNFGGLERHGFARNKFWSHDEDPSPLPPAN-KQSSVDLIL 110
Query: 61 KPSEEDMKIWPHSFEYRLRVALGPGGDLMLTSRVRNTSSDGKPFSFTVAHHTYFSVSDIS 120
K +E+D+K WPHSFE R+R+++ PG L L RVRN D K FSF A Y VSDIS
Sbjct: 111 KSTEDDLKTWPHSFELRIRISISPG-KLTLIPRVRNI--DSKAFSFMFALRNYLYVSDIS 167
Query: 121 EVRVEGLETLDYLDFLQNKERFTEQGDALTFESEVDKIYVSTPTKIAIIDHEKKRTFVLL 180
EVRVEGLETLDYLD L KERFTEQ DA+TF+ EVD++Y++TPTKIA+IDHE+KRT L
Sbjct: 168 EVRVEGLETLDYLDNLIGKERFTEQADAITFDGEVDRVYLNTPTKIAVIDHERKRTIELR 227
Query: 181 KDGLPDAVVWNPWDKKAKALADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSAV 240
K+G+P+AVVWNPWDKKAK +AD GD++YK MLCV++ IE + LKP EEWKGR ELS V
Sbjct: 228 KEGMPNAVVWNPWDKKAKTIADMGDEDYKTMLCVDSGVIEPLVLLKPREEWKGRQELSIV 287
Query: 241 PSSYCSGQLDPRKVLQG 257
SSYCSGQLDPRKVL G
Sbjct: 288 SSSYCSGQLDPRKVLYG 304
>AT3G01590.2 | Symbols: | aldose 1-epimerase family protein |
chr3:226654-228353 FORWARD
Length = 306
Score = 351 bits (900), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/257 (65%), Positives = 201/257 (78%), Gaps = 4/257 (1%)
Query: 1 AMFKPPKAIRGGIPICFPQFGSLGTLDSHGFARNRFWTIDNDPSPFSTNTLNKAFVDLIL 60
A +KPPKAIRGGIP+CFPQFG+ G L+ HGFARN+FW+ D DPSP ++ VDLIL
Sbjct: 52 AQYKPPKAIRGGIPVCFPQFGNFGGLERHGFARNKFWSHDEDPSPLPPAN-KQSSVDLIL 110
Query: 61 KPSEEDMKIWPHSFEYRLRVALGPGGDLMLTSRVRNTSSDGKPFSFTVAHHTYFSVSDIS 120
K +E+D+K WPHSFE R+R+++ PG L L RVRN D K FSF A Y VSDIS
Sbjct: 111 KSTEDDLKTWPHSFELRIRISISPG-KLTLIPRVRNI--DSKAFSFMFALRNYLYVSDIS 167
Query: 121 EVRVEGLETLDYLDFLQNKERFTEQGDALTFESEVDKIYVSTPTKIAIIDHEKKRTFVLL 180
EVRVEGLETLDYLD L KERFTEQ DA+TF+ EVD++Y++TPTKIA+IDHE+KRT L
Sbjct: 168 EVRVEGLETLDYLDNLIGKERFTEQADAITFDGEVDRVYLNTPTKIAVIDHERKRTIELR 227
Query: 181 KDGLPDAVVWNPWDKKAKALADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSAV 240
K+G+P+AVVWNPWDKKAK +AD GD++YK MLCV++ IE + LKP EEWKGR ELS V
Sbjct: 228 KEGMPNAVVWNPWDKKAKTIADMGDEDYKTMLCVDSGVIEPLVLLKPREEWKGRQELSIV 287
Query: 241 PSSYCSGQLDPRKVLQG 257
SSYCSGQLDPRKVL G
Sbjct: 288 SSSYCSGQLDPRKVLYG 304
>AT4G23730.1 | Symbols: | aldose 1-epimerase family protein |
chr4:12362965-12364802 FORWARD
Length = 306
Score = 345 bits (886), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 160/245 (65%), Positives = 204/245 (83%), Gaps = 4/245 (1%)
Query: 1 AMFKPPKAIRGGIPICFPQFGSLGTLDSHGFARNRFWTIDNDPSPF-STNTLNKAFVDLI 59
A KPP +RGGIPICFPQFG+ G+L+ HGFARN+ W ++N+P S ++ KA+VDL+
Sbjct: 64 ANLKPPHPVRGGIPICFPQFGTRGSLEQHGFARNKMWLVENNPPALPSFDSTGKAYVDLV 123
Query: 60 LKPSEED-MKIWPHSFEYRLRVALGPGGDLMLTSRVRNTSSDGKPFSFTVAHHTYFSVSD 118
LK S+ED M+IWP+SFE+ LRV+L G+L L SRVRN +S KPFSF++A+HTYFS+SD
Sbjct: 124 LKSSDEDTMRIWPYSFEFHLRVSLALDGNLTLISRVRNINS--KPFSFSIAYHTYFSISD 181
Query: 119 ISEVRVEGLETLDYLDFLQNKERFTEQGDALTFESEVDKIYVSTPTKIAIIDHEKKRTFV 178
ISEVR+EGLETLDYLD + ++ERFTEQGDALTFESE+D++Y+++ +AI DHE+KRTF+
Sbjct: 182 ISEVRLEGLETLDYLDNMHDRERFTEQGDALTFESEIDRVYLNSKDVVAIFDHERKRTFL 241
Query: 179 LLKDGLPDAVVWNPWDKKAKALADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELS 238
+ K+GLPD VVWNPW+KKA+AL D GDDEY+HMLCV+ AAIEKPITLKPGEEW G+L LS
Sbjct: 242 IKKEGLPDVVVWNPWEKKARALTDLGDDEYRHMLCVDGAAIEKPITLKPGEEWTGKLHLS 301
Query: 239 AVPSS 243
V S+
Sbjct: 302 LVLST 306
>AT4G25900.1 | Symbols: | aldose 1-epimerase family protein |
chr4:13161496-13163406 FORWARD
Length = 318
Score = 290 bits (743), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 137/243 (56%), Positives = 182/243 (74%), Gaps = 7/243 (2%)
Query: 1 AMFKPPKAIRGGIPICFPQFGSLGTLDSHGFARNRFWTIDNDPSPFSTNTLNKAFVDLIL 60
A+F+PP IRGGIP+ FPQ+ + G L SHGF R RFW ++ P P + L+ A VDLI+
Sbjct: 80 AIFQPPTPIRGGIPVLFPQYSNTGPLPSHGFVRQRFWEVETKPPPLPS--LSTAHVDLIV 137
Query: 61 KPSEEDMKIWPHSFEYRLRVALGPGGDLMLTSRVRNTSSDGKPFSFTVAHHTYFSVSDIS 120
+ S ED+KIWPH FEYRLRVALG GDL LTSRV+NT D KPF+FT A H YF+VS+IS
Sbjct: 138 RSSNEDLKIWPHKFEYRLRVALGHDGDLTLTSRVKNT--DTKPFNFTFALHPYFAVSNIS 195
Query: 121 EVRVEGLETLDYLDFLQNKERFTEQGDALTFESEVDKIYVSTPTKIAIIDHEKKRTFVLL 180
E+ VEGL LDYLD +N+ RFT+ +TF +++D++Y+STP ++ I+DH+KK+T V+
Sbjct: 196 EIHVEGLHNLDYLDQQKNRTRFTDHEKVITFNAQLDRLYLSTPDQLRIVDHKKKKTIVVH 255
Query: 181 KDGLPDAVVWNPWDKKAKALADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSAV 240
K+G DAVVWNPWDKK ++D G ++YK + VE+AA+ KPIT+ PG+EWKG L +S V
Sbjct: 256 KEGQVDAVVWNPWDKK---VSDLGVEDYKRFVTVESAAVAKPITVNPGKEWKGILHVSVV 312
Query: 241 PSS 243
PS+
Sbjct: 313 PSN 315
>AT5G66530.1 | Symbols: | aldose 1-epimerase family protein |
chr5:26571047-26572801 REVERSE
Length = 307
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 119/240 (49%), Gaps = 21/240 (8%)
Query: 1 AMFKPPKAIRGGIPICFPQFGSLGTLDSHGFARNRFWTIDNDPSPFSTNTLNKAFVDLIL 60
A+F K I GGIP CFPQFG G + HGF RN W++ + S N + A V L L
Sbjct: 85 AVFNKIKPISGGIPHCFPQFGP-GLIQQHGFGRNMDWSVVD-----SQNADDNAAVTLEL 138
Query: 61 KPSEEDMKIWPHSFEYRLRVALGPGGDLMLTSRVRNTSSDGKPFSFTVAHHTYFSVSDI- 119
K +W +F+ +V +G L++ ++ T++D KPFSF+ A HTYF S
Sbjct: 139 KDGPYSRAMWDFAFQALYKVIVGADS---LSTELKITNTDDKPFSFSTALHTYFRASSAG 195
Query: 120 SEVR-VEGLETLDYLDFLQNKERFTEQGDALTFESEVDKIYVSTPTKIAIIDHEKKRTFV 178
+ VR ++G +TL+ +N E DA+TF VD +Y+ P ++ D+ +
Sbjct: 196 ASVRGLKGCKTLNKDPDPKNPIEGKEDRDAVTFPGFVDTVYLDAPNELQ-FDNGLGDKII 254
Query: 179 LLKDGLPDAVVWNPWDKKAKALADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELS 238
+ DAV+WNP + DF +CVE A + + L+PG+ W LS
Sbjct: 255 IKNTNWSDAVLWNPHTQMEACYRDF--------VCVENAKLGD-VKLEPGQSWTATQLLS 305
>AT1G55370.2 | Symbols: | carbohydrate binding / catalytic |
chr1:20678518-20679737 FORWARD
Length = 354
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 144 EQGDALTFESEVDKIYVSTPTKIAIIDHEKKRTFVLLKDGLPDAVVWNPWDKKAKALADF 203
E+ + E+ +IY P +ID ++ + V+ ++G + +++P + L +
Sbjct: 263 EESNYKQLNREMSRIYTCAPKSFTVIDRGRRNSVVVGREGFEEVYMYSPGSR----LESY 318
Query: 204 GDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLEL 237
Y +C+ +++ PI+L+ G W+G L L
Sbjct: 319 TKSAY---VCIGPSSLLSPISLESGCVWRGVLHL 349