Miyakogusa Predicted Gene
- chr6.CM0139.460.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr6.CM0139.460.nc - phase: 0
(341 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G19150.2 | Symbols: | carbohydrate kinase family | chr5:6426... 466 e-131
AT5G19150.1 | Symbols: | carbohydrate kinase family | chr5:6426... 466 e-131
>AT5G19150.2 | Symbols: | carbohydrate kinase family |
chr5:6426282-6428404 REVERSE
Length = 365
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/342 (69%), Positives = 273/342 (79%), Gaps = 33/342 (9%)
Query: 22 VFRRQKLLIRSL-GSGIDYHNHNHSENMQRMRSV-EADAESIIRAITPALDSTRHKGQAG 79
V RRQ+ L+R+L GS I ++ M S EADAES++R +TP+LD RHKGQAG
Sbjct: 25 VLRRQEFLVRTLCGSPI----------IRAMSSTSEADAESVLRTVTPSLDLKRHKGQAG 74
Query: 80 KIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAATVIKSYSPELIVHPVLEESYS 139
KIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAA VIKSYSPELIVHPVLEESYS
Sbjct: 75 KIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPVLEESYS 134
Query: 140 VR---EEDKKTTSSKVLAEVDKWLERFDCLVIGPGLGRDPFLLDCVSKIMRHARQSNIPI 196
+ EEDK+ KVL EV KW+ERFDCLVIGPGLGRDPFLL+CVS IM A++SN+P
Sbjct: 135 ISQLSEEDKREVQDKVLGEVGKWMERFDCLVIGPGLGRDPFLLECVSIIMLLAKKSNVPF 194
Query: 197 VIDGDGLFLVTDNIDLVSGYTLAVLTPNVNEYKRLVQKVLSSEVNDADATQQVLSLAKQI 256
VIDGDGLFLVT++IDLV Y LAVLTPNVNEYKRLVQKVL+ EV++ +A Q+ SLAKQI
Sbjct: 195 VIDGDGLFLVTNSIDLVHSYPLAVLTPNVNEYKRLVQKVLNCEVDEQNAEDQLRSLAKQI 254
Query: 257 GGVTILKKGKSDLISDGDTVKSVTIYGSPRRCGGQGDILSGSLT---------------- 300
GGVTIL+KGKSDLIS+G+TVKSV+IYGSPRRCGGQGDILSG +
Sbjct: 255 GGVTILRKGKSDLISNGETVKSVSIYGSPRRCGGQGDILSGGVAVFLSWAQQLKSDPESP 314
Query: 301 --NPAVLGCIAGSAMMRKAATLAFSNKKRSTVTGDIIECLGK 340
NPA+LGCIA S ++RKAA+LAF+ KRST+T DIIECLG+
Sbjct: 315 SENPAILGCIAASGLLRKAASLAFTKHKRSTLTSDIIECLGE 356
>AT5G19150.1 | Symbols: | carbohydrate kinase family |
chr5:6426282-6428404 REVERSE
Length = 365
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/342 (69%), Positives = 273/342 (79%), Gaps = 33/342 (9%)
Query: 22 VFRRQKLLIRSL-GSGIDYHNHNHSENMQRMRSV-EADAESIIRAITPALDSTRHKGQAG 79
V RRQ+ L+R+L GS I ++ M S EADAES++R +TP+LD RHKGQAG
Sbjct: 25 VLRRQEFLVRTLCGSPI----------IRAMSSTSEADAESVLRTVTPSLDLKRHKGQAG 74
Query: 80 KIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAATVIKSYSPELIVHPVLEESYS 139
KIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAA VIKSYSPELIVHPVLEESYS
Sbjct: 75 KIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPVLEESYS 134
Query: 140 VR---EEDKKTTSSKVLAEVDKWLERFDCLVIGPGLGRDPFLLDCVSKIMRHARQSNIPI 196
+ EEDK+ KVL EV KW+ERFDCLVIGPGLGRDPFLL+CVS IM A++SN+P
Sbjct: 135 ISQLSEEDKREVQDKVLGEVGKWMERFDCLVIGPGLGRDPFLLECVSIIMLLAKKSNVPF 194
Query: 197 VIDGDGLFLVTDNIDLVSGYTLAVLTPNVNEYKRLVQKVLSSEVNDADATQQVLSLAKQI 256
VIDGDGLFLVT++IDLV Y LAVLTPNVNEYKRLVQKVL+ EV++ +A Q+ SLAKQI
Sbjct: 195 VIDGDGLFLVTNSIDLVHSYPLAVLTPNVNEYKRLVQKVLNCEVDEQNAEDQLRSLAKQI 254
Query: 257 GGVTILKKGKSDLISDGDTVKSVTIYGSPRRCGGQGDILSGSLT---------------- 300
GGVTIL+KGKSDLIS+G+TVKSV+IYGSPRRCGGQGDILSG +
Sbjct: 255 GGVTILRKGKSDLISNGETVKSVSIYGSPRRCGGQGDILSGGVAVFLSWAQQLKSDPESP 314
Query: 301 --NPAVLGCIAGSAMMRKAATLAFSNKKRSTVTGDIIECLGK 340
NPA+LGCIA S ++RKAA+LAF+ KRST+T DIIECLG+
Sbjct: 315 SENPAILGCIAASGLLRKAASLAFTKHKRSTLTSDIIECLGE 356