Miyakogusa Predicted Gene

chr6.CM0055.330.nc

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr6.CM0055.330.nc - phase: 0 /partial
         (340 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33650.1 | Symbols: ADL2 | ADL2 (ARABIDOPSIS DYNAMIN-LIKE 2);...   291   3e-79
AT2G14120.1 | Symbols:  | dynamin-like protein 2b (ADL2b) | chr2...   278   3e-75
AT2G14120.2 | Symbols:  | dynamin-like protein 2b (ADL2b) | chr2...   276   1e-74

>AT4G33650.1 | Symbols: ADL2 | ADL2 (ARABIDOPSIS DYNAMIN-LIKE 2);
           GTP binding / GTPase | chr4:16161076-16166590 FORWARD
          Length = 808

 Score =  291 bits (746), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 144/260 (55%), Positives = 189/260 (72%), Gaps = 1/260 (0%)

Query: 9   IISSIGALEMDYINTSHPNFIGGSRALEFAVQQTKSSRAALSVSRQKDGLESDKGSASER 68
           +I  I  +EMDYINTSHPNFIGG++A+E A+ Q KSSR    V+R KD +E D+ S+S  
Sbjct: 510 MIGDIIDMEMDYINTSHPNFIGGTKAVEAAMHQVKSSRIPHPVARPKDTVEPDRTSSSTS 569

Query: 69  SVKSRAILARQSNGVAGDQGVRAVSEIEKIAPXXXXXXXXXXXXXXXXXXXXRMSVKENI 128
            VKSR+ L RQ+NG+  DQGV + ++ EK  P                    R   K+++
Sbjct: 570 QVKSRSFLGRQANGIVTDQGVVS-ADAEKAQPAANASDTRWGIPSIFRGGDTRAVTKDSL 628

Query: 129 ASKPHTEPVHSVEQSFSMIHLREPPTILRPSESNSETEAIEITVTKLLLKSYYDIVRKNV 188
            +KP +E V  +  + SMI+L+EPP +LRP+E++SE EA+EI +TKLLL+SYYDIVRKN+
Sbjct: 629 LNKPFSEAVEDMSHNLSMIYLKEPPAVLRPTETHSEQEAVEIQITKLLLRSYYDIVRKNI 688

Query: 189 EDFIPKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEMLQEPEEIAMKRKRCRELLRAYQQ 248
           ED +PKAIMHFLVN+TKRELHNVFIKKLYR+NLFEEMLQEP+EIA+KRKR +E L   QQ
Sbjct: 689 EDSVPKAIMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPDEIAVKRKRTQETLHVLQQ 748

Query: 249 AFKDLEELPMEAETVERGYS 268
           A++ L+ELP+EA++V  G S
Sbjct: 749 AYRTLDELPLEADSVSAGMS 768


>AT2G14120.1 | Symbols:  | dynamin-like protein 2b (ADL2b) |
           chr2:5961335-5967097 REVERSE
          Length = 780

 Score =  278 bits (711), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 138/261 (52%), Positives = 188/261 (72%), Gaps = 2/261 (0%)

Query: 9   IISSIGALEMDYINTSHPNFIGGSRALEFAVQQTKSSRAALSVSRQKDGLESDKGSASER 68
           +I  +  +EMDYINTSHPNFIGG++A+E A+Q  KSSR    V+R +D +E ++ ++S  
Sbjct: 495 MIRDLIEMEMDYINTSHPNFIGGTKAVEQAMQTVKSSRIPHPVARPRDTVEPERTASSGS 554

Query: 69  SVKSRAILARQSNGVAGDQGVRAVSEIEKIAPXXXXXXXXXXXXXXXXXXXXRMSVKENI 128
            +K+R+ L RQ+NG+  DQ V   ++ E+ AP                    + + K N+
Sbjct: 555 QIKTRSFLGRQANGIITDQAVPTAADAERPAPAGSTSWSGFSSIFRGSDG--QAAAKNNL 612

Query: 129 ASKPHTEPVHSVEQSFSMIHLREPPTILRPSESNSETEAIEITVTKLLLKSYYDIVRKNV 188
            +KP +E    V Q+ S I+L+EPPTIL+ SE++SE E++EI +TKLLLKSYYDIVRKNV
Sbjct: 613 LNKPFSETTQEVYQNLSTIYLKEPPTILKSSETHSEQESVEIEITKLLLKSYYDIVRKNV 672

Query: 189 EDFIPKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEMLQEPEEIAMKRKRCRELLRAYQQ 248
           ED +PKAIMHFLVN TKRELHNVFI+KLYR+NL EE+L+EP+E+A+KRKR +E LR  QQ
Sbjct: 673 EDLVPKAIMHFLVNYTKRELHNVFIEKLYRENLIEELLKEPDELAIKRKRTQETLRILQQ 732

Query: 249 AFKDLEELPMEAETVERGYSL 269
           A + L+ELP+EAE+VERGY +
Sbjct: 733 ANRTLDELPLEAESVERGYKI 753


>AT2G14120.2 | Symbols:  | dynamin-like protein 2b (ADL2b) |
           chr2:5961335-5967097 REVERSE
          Length = 780

 Score =  276 bits (706), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 137/261 (52%), Positives = 187/261 (71%), Gaps = 2/261 (0%)

Query: 9   IISSIGALEMDYINTSHPNFIGGSRALEFAVQQTKSSRAALSVSRQKDGLESDKGSASER 68
           +I  +  +EMDYINTSHPNFIGG++A+E A+Q  KSSR    V+R +D +E ++ ++S  
Sbjct: 495 MIRDLIEMEMDYINTSHPNFIGGTKAVEQAMQTVKSSRIPHPVARPRDTVEPERTASSGS 554

Query: 69  SVKSRAILARQSNGVAGDQGVRAVSEIEKIAPXXXXXXXXXXXXXXXXXXXXRMSVKENI 128
            +K+R+ L RQ+NG+  DQ     ++ E+ AP                    + + K N+
Sbjct: 555 QIKTRSFLGRQANGIITDQAFPTAADAERPAPAGSTSWSGFSSIFRGSDG--QAAAKNNL 612

Query: 129 ASKPHTEPVHSVEQSFSMIHLREPPTILRPSESNSETEAIEITVTKLLLKSYYDIVRKNV 188
            +KP +E    V Q+ S I+L+EPPTIL+ SE++SE E++EI +TKLLLKSYYDIVRKNV
Sbjct: 613 LNKPFSETTQEVYQNLSTIYLKEPPTILKSSETHSEQESVEIEITKLLLKSYYDIVRKNV 672

Query: 189 EDFIPKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEMLQEPEEIAMKRKRCRELLRAYQQ 248
           ED +PKAIMHFLVN TKRELHNVFI+KLYR+NL EE+L+EP+E+A+KRKR +E LR  QQ
Sbjct: 673 EDLVPKAIMHFLVNYTKRELHNVFIEKLYRENLIEELLKEPDELAIKRKRTQETLRILQQ 732

Query: 249 AFKDLEELPMEAETVERGYSL 269
           A + L+ELP+EAE+VERGY +
Sbjct: 733 ANRTLDELPLEAESVERGYKI 753