Miyakogusa Predicted Gene

chr6.CM0037.310.nc

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr6.CM0037.310.nc + phase: 0 /est
         (74 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57870.1 | Symbols:  | eukaryotic translation initiation fact...    42   1e-04
AT5G57870.2 | Symbols:  | eukaryotic translation initiation fact...    42   1e-04

>AT5G57870.1 | Symbols:  | eukaryotic translation initiation
          factor 4F, putative / eIF-4F, putative |
          chr5:23456981-23460659 FORWARD
          Length = 780

 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/18 (100%), Positives = 18/18 (100%)

Query: 29 MQQGDQTVLSLRPGGGRG 46
          MQQGDQTVLSLRPGGGRG
Sbjct: 1  MQQGDQTVLSLRPGGGRG 18


>AT5G57870.2 | Symbols:  | eukaryotic translation initiation
          factor 4F, putative / eIF-4F, putative |
          chr5:23456981-23460659 FORWARD
          Length = 776

 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/18 (100%), Positives = 18/18 (100%)

Query: 29 MQQGDQTVLSLRPGGGRG 46
          MQQGDQTVLSLRPGGGRG
Sbjct: 1  MQQGDQTVLSLRPGGGRG 18