Miyakogusa Predicted Gene
- chr5.LjT43D06.200.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr5.LjT43D06.200.nd - phase: 0
(219 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65600.1 | Symbols: | legume lectin family protein / protein... 81 5e-16
AT5G10530.1 | Symbols: | lectin protein kinase, putative | chr5... 69 2e-12
AT5G03140.1 | Symbols: | lectin protein kinase family protein |... 46 1e-05
AT3G53380.1 | Symbols: | lectin protein kinase family protein |... 46 2e-05
AT5G06740.1 | Symbols: | lectin protein kinase family protein |... 45 3e-05
AT5G01560.1 | Symbols: | lectin protein kinase, putative | chr5... 44 7e-05
AT5G55830.1 | Symbols: | lectin protein kinase, putative | chr5... 43 1e-04
AT3G16530.1 | Symbols: | legume lectin family protein | chr3:56... 42 4e-04
>AT5G65600.1 | Symbols: | legume lectin family protein / protein
kinase family protein | chr5:26233352-26235379 REVERSE
Length = 675
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 88/192 (45%), Gaps = 17/192 (8%)
Query: 29 VEGVSFNFTKFT--DDGSLILQGDAKIWTDGRLALPSDPLIGKTTSRV---LYATPVPIW 83
V+ + FNFT F D G + GDA DG + + + TS+V Y+ VPIW
Sbjct: 33 VDSLYFNFTSFRQGDPGDIFYHGDATPDEDGTVNFNN----AEQTSQVGWITYSKKVPIW 88
Query: 84 DSTTGXXXXXXXXXXXXXXXXPGYKISDGLVFFLAPWGTTIPPNSEGKNLGILDEKNGYN 143
TG G+ FFLAP G +P S G L + KN Y+
Sbjct: 89 SHKTGKASDFSTSFSFKIDARNLSADGHGICFFLAPMGAQLPAYSVGGFLNLFTRKNNYS 148
Query: 144 Q---FVAVEFDSYNNTR-DP--TFRHIGIDVNSVMSMNLVKWNRVSGALE--KAIIIYDS 195
V VEFD++NN DP H+GI+ NS++S N WN S + + A I YDS
Sbjct: 149 SSFPLVHVEFDTFNNPGWDPNDVGSHVGINNNSLVSSNYTSWNASSHSQDICHAKISYDS 208
Query: 196 PTKTLSVVVTHQ 207
TK LSV ++
Sbjct: 209 VTKNLSVTWAYE 220
>AT5G10530.1 | Symbols: | lectin protein kinase, putative |
chr5:3324979-3326934 REVERSE
Length = 651
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 29 VEGVSFNFTKFTDDGSLI-LQGDAKIWTDGRLALPSDPLIGKTTSRVLYATPVPIWD-ST 86
V V FN ++F D S I QGDA+ +G + L + + Y VP+W+ T
Sbjct: 17 VCSVQFNISRFGSDVSEIAYQGDAR--ANGAVELTNIDYTCRA-GWATYGKQVPLWNPGT 73
Query: 87 TGXXXXXXXXXXXXXXXXPGY-KISDGLVFFLAPWGTTIPPNSEGKNLGILDEKNGYNQ- 144
+ GY G FFLAP +PPNS G LG+ + N +
Sbjct: 74 SKPSDFSTRFSFRIDTRNVGYGNYGHGFAFFLAPARIQLPPNSAGGFLGLFNGTNNQSSA 133
Query: 145 --FVAVEFDSYNNTR-DP--TFRHIGIDVNSVMSMNLVKWNRVSGALE--KAIIIYDSPT 197
V VEFD++ N DP H+GI+ NS++S N WN S + + +I YDS
Sbjct: 134 FPLVYVEFDTFTNPEWDPLDVKSHVGINNNSLVSSNYTSWNATSHNQDIGRVLIFYDSAR 193
Query: 198 KTLSVVVTH 206
+ LSV T+
Sbjct: 194 RNLSVSWTY 202
>AT5G03140.1 | Symbols: | lectin protein kinase family protein |
chr5:737749-739884 REVERSE
Length = 711
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Query: 70 TTSRVLYATPVPIWDSTTGXXXXXXXXXXXXXXXXPGYKISDGLVFFLAPWGTTIPPNSE 129
T + LY PV T I GL F ++P + S
Sbjct: 72 TAGKALYGKPVKFRHPETKSPASFTTYFSFSVTNLNPSSIGGGLAFVISPDEDYL--GST 129
Query: 130 GKNLGILDEKNGYNQFVAVEFDSYNNT--RDPTFRHIGIDVNSVMSMNLVKWNRV----- 182
G LG+ +E + FVAVEFD+ + +D H+G+D+N+V+S + V
Sbjct: 130 GGFLGLTEETGSGSGFVAVEFDTLMDVQFKDVNGNHVGLDLNAVVSAAVADLGNVDIDLK 189
Query: 183 SGALEKAIIIYDSPTKTLSVVVTHQN 208
SG + I YD + L+V V++ N
Sbjct: 190 SGNAVNSWITYDGSGRVLTVYVSYSN 215
>AT3G53380.1 | Symbols: | lectin protein kinase family protein |
chr3:19800182-19802329 REVERSE
Length = 715
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 45 LILQGDAKIWTDGRLALPSDPLIGKT-TSRVLYATPVPIWDSTTGXXXXXXXXXXXXXXX 103
L L GDA++ ++G + L D + + +VLY+ P+ T
Sbjct: 34 LKLLGDARL-SNGIVGLTRDLSVPNSGAGKVLYSNPIRFRQPGTHFPTSFSSFFSFSITN 92
Query: 104 XPGYKISDGLVFFLAPWGTTIPPNSEGKNLGILDEKNGYNQFVAVEFDSYNNT--RDPTF 161
I GL F ++P +I G +LG+ ++FVAVEFD+ + +D
Sbjct: 93 VNPSSIGGGLAFVISPDANSI--GIAGGSLGLTGPNGSGSKFVAVEFDTLMDVDFKDINS 150
Query: 162 RHIGIDVNSVMS-----MNLVKWNRVSGALEKAIIIYDSPTKTLSVVVTHQN 208
H+G DVN V+S + V + SG + I YD T+ +V V++ N
Sbjct: 151 NHVGFDVNGVVSSVSGDLGTVNIDLKSGNTINSWIEYDGLTRVFNVSVSYSN 202
>AT5G06740.1 | Symbols: | lectin protein kinase family protein |
chr5:2084095-2086053 FORWARD
Length = 652
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 14/156 (8%)
Query: 29 VEGVSFNFTKFTDDGSLILQGDAKIWTDGRLALPSD------PLIGKTTSRVLYATPVPI 82
V+ + F+F F L L D G + + D I R LY P +
Sbjct: 22 VKCLKFDFPGFNVSNELELIRDNSYIVFGAIQVTPDVTGGPGGTIANQAGRALYKKPFRL 81
Query: 83 WDSTTGXXXXXXXXXXXXXXXXPGYKISDGLVFFLAPWGTTIPPNSEGKNLGILDE---K 139
W PG +GL F L P T P NS G LG+++E +
Sbjct: 82 WSKHKSATFNTTFVINISNKTDPG---GEGLAFVLTP-EETAPQNSSGMWLGMVNERTNR 137
Query: 140 NGYNQFVAVEFDSY-NNTRDPTFRHIGIDVNSVMSM 174
N ++ V+VEFD+ +++ D H+ ++VN++ S+
Sbjct: 138 NNESRIVSVEFDTRKSHSDDLDGNHVALNVNNINSV 173
>AT5G01560.1 | Symbols: | lectin protein kinase, putative |
chr5:218169-220244 REVERSE
Length = 691
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 34 FNFTKFTDDGSLI-LQGDAKIWTDG--RLALPSDPLIGKTTSRVLYATPVPIWDSTTGXX 90
F F F + S I +QGD+ I ++G RL + ++G Y PV + DS +
Sbjct: 30 FIFHGFKGNQSEIHMQGDSTITSNGLLRLTDRNSDVVGTA----FYHKPVRLLDSNS-TN 84
Query: 91 XXXXXXXXXXXXXXPGYKISDG---LVFFLAPWGTTIPPNSEGKNLGILDEKN---GYNQ 144
P S+G F L+P + E + +G+L+E+N N
Sbjct: 85 TTVRSFSTSFIFIIPSSSTSNGGFGFTFTLSPTPNRTDADPE-QYMGLLNERNDGNSSNH 143
Query: 145 FVAVEFDSYNNTRDPTFR---HIGIDVNSVMS-------------MNLVKWNRVSGALEK 188
AVEFD+ +D T R HIG++ NS+ S ++ VSG +
Sbjct: 144 VFAVEFDTVQGFKDGTNRIGNHIGLNFNSLSSDVQEPVAYFNNNDSQKEEFQLVSGEPIQ 203
Query: 189 AIIIYDSPTKTLSVVV 204
+ Y PTKTL++ V
Sbjct: 204 VFLDYHGPTKTLNLTV 219
>AT5G55830.1 | Symbols: | lectin protein kinase, putative |
chr5:22611881-22613926 FORWARD
Length = 681
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 28 SVEGVSFNFTKFTDDGSLILQGDAKIWTDGRLALPSDPLIGKTTS-RVLYATPVPIWD-- 84
S + ++F F FT +L GD+ + +G + L + + T+S V+Y P+ +D
Sbjct: 27 SSDNMNFTFKSFTIR-NLTFLGDSHL-RNGVVGLTRELGVPDTSSGTVIYNNPIRFYDPD 84
Query: 85 -STTGXXXXXXXXXXXXXXXXPGYKISDGLVFFLAPWGTTIPPNSEGKNLGILDEKNGY- 142
+TT P DGL FFL+ T+ S G LG+++
Sbjct: 85 SNTTASFSTHFSFTVQNLNPDPT-SAGDGLAFFLSHDNDTL--GSPGGYLGLVNSSQPMK 141
Query: 143 NQFVAVEFDSYNNTR--DPTFRHIGIDVNSVMSMN 175
N+FVA+EFD+ + DP HIG+DV+S+ S++
Sbjct: 142 NRFVAIEFDTKLDPHFNDPNGNHIGLDVDSLNSIS 176
>AT3G16530.1 | Symbols: | legume lectin family protein |
chr3:5624592-5625422 REVERSE
Length = 276
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 26 VNSVEGVSFNFTKFTDDGSLILQGDAK-------IWTDGRLALPSD--PLIGKTTSRVLY 76
N+ V FNF F D +L+ GDA+ + G L++ D P + + LY
Sbjct: 14 ANAAFAVKFNFDSF-DGSNLLFLGDAELGPSSDGVSRSGALSMTRDENPF---SHGQGLY 69
Query: 77 ATPVPIWDSTTGXXXXXXXXXXXXXXXXPGYKISDGLVFFLAPWGTTIPPNSEGKNLGIL 136
+P S T G F + P S+G LGIL
Sbjct: 70 INQIPFKPSNTSSPFSFETSFTFSITPRTKPNSGQGFAFIITPEADNSGA-SDGGYLGIL 128
Query: 137 DEKNG---YNQFVAVEFDSYNNTR--DPTFRHIGIDVNSVMSM 174
++ N N +A+EFD++ N D + H+G+++NS+ S+
Sbjct: 129 NKTNDGKPENHILAIEFDTFQNKEFLDISGNHVGVNINSMTSL 171