Miyakogusa Predicted Gene
- chr5.LjT02I10.320.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr5.LjT02I10.320.nd - phase: 0
(465 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G02070.1 | Symbols: ATIDD5 | ATIDD5 (ARABIDOPSIS THALIANA IND... 330 8e-91
AT2G02080.1 | Symbols: ATIDD4 | ATIDD4 (ARABIDOPSIS THALIANA IND... 316 2e-86
AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein... 313 2e-85
AT3G50700.1 | Symbols: ATIDD2 | ATIDD2 (ARABIDOPSIS THALIANA IND... 298 5e-81
AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein... 295 4e-80
AT1G03840.1 | Symbols: MGP | MGP (MAGPIE); nucleic acid binding ... 294 9e-80
AT1G55110.1 | Symbols: ATIDD7 | ATIDD7 (ARABIDOPSIS THALIANA IND... 294 1e-79
AT3G13810.1 | Symbols: ATIDD11 | ATIDD11 (ARABIDOPSIS THALIANA I... 292 4e-79
AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding... 291 6e-79
AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein... 291 7e-79
AT1G03840.2 | Symbols: MGP | MGP (MAGPIE); nucleic acid binding ... 288 5e-78
AT5G44160.1 | Symbols: NUC | NUC (NUTCRACKER); nucleic acid bind... 287 1e-77
AT4G02670.1 | Symbols: ATIDD12 | ATIDD12 (ARABIDOPSIS THALIANA I... 283 1e-76
AT2G02080.2 | Symbols: ATIDD4 | ATIDD4 (ARABIDOPSIS THALIANA IND... 270 1e-72
AT5G60470.1 | Symbols: | zinc finger (C2H2 type) family protein... 243 1e-64
AT2G01940.1 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS... 216 3e-56
AT1G68130.1 | Symbols: ATIDD14 | ATIDD14 (ARABIDOPSIS THALIANA I... 212 4e-55
AT2G01940.3 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS... 207 1e-53
AT1G25250.1 | Symbols: ATIDD16 | ATIDD16 (ARABIDOPSIS THALIANA I... 196 2e-50
AT2G01940.2 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS... 140 1e-33
AT1G68130.2 | Symbols: ATIDD14 | ATIDD14 (ARABIDOPSIS THALIANA I... 139 4e-33
AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein... 86 5e-17
AT1G34370.1 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON RHIZOT... 86 7e-17
AT1G34370.2 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON RHIZOT... 86 7e-17
AT1G34370.3 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON RHIZOT... 85 1e-16
AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4)... 74 3e-13
AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5)... 73 3e-13
AT1G34790.1 | Symbols: TT1 | TT1 (TRANSPARENT TESTA 1); transcri... 72 8e-13
AT1G13290.1 | Symbols: | zinc finger (C2H2 type) family protein... 72 1e-12
AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nuclei... 72 1e-12
AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3)... 68 1e-11
>AT2G02070.1 | Symbols: ATIDD5 | ATIDD5 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 5); nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:505522-509153 FORWARD
Length = 602
Score = 330 bits (847), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 162/213 (76%), Positives = 175/213 (82%), Gaps = 9/213 (4%)
Query: 45 QKKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK 104
QKKKRNQP TPN DAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK
Sbjct: 51 QKKKRNQPRTPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK 110
Query: 105 QKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQS 164
QK+ KE KRKVYLCPEP+CVHHDPSRALGDLTGIKKHY RKHGE YAVQS
Sbjct: 111 QKSTKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQS 170
Query: 165 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQPPNLSSAIGSHL-YG 223
DWKAHSKTCGT+EYRCDCGTLFSRRDSFITHRAFCDALAQESAR P +L+S H YG
Sbjct: 171 DWKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTSLTSLPSHHFPYG 230
Query: 224 -------SSSNNMGLALSHVG-PQLSNMQPSDL 248
+++++M L LSH+G PQ + QP D+
Sbjct: 231 QNTNNSNNNASSMILGLSHMGAPQNLDHQPGDV 263
>AT2G02080.1 | Symbols: ATIDD4 | ATIDD4 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 4); transcription factor |
chr2:518327-521169 REVERSE
Length = 516
Score = 316 bits (809), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 140/165 (84%), Positives = 148/165 (89%)
Query: 46 KKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 105
KK+RNQPG PNPDAEV+ALSPKTLMATNRFIC+VCNKGFQREQNLQLHRRGHNLPWKLKQ
Sbjct: 54 KKRRNQPGNPNPDAEVVALSPKTLMATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQ 113
Query: 106 KTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSD 165
K+ KE KRKVYLCPEPTCVHHDPSRALGDLTGIKKHY RKHGE YAVQSD
Sbjct: 114 KSTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSD 173
Query: 166 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQP 210
WKAHSKTCGT+EYRCDCGT+FSRRDS+ITHRAFCDAL QE+AR P
Sbjct: 174 WKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFCDALIQETARNP 218
>AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr1:4990065-4992437 FORWARD
Length = 467
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 139/165 (84%), Positives = 149/165 (90%)
Query: 46 KKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 105
KK+RNQPG PNPDAEVIALSPKT+MATNRF+CEVCNKGFQREQNLQLHRRGHNLPWKLKQ
Sbjct: 53 KKRRNQPGNPNPDAEVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 112
Query: 106 KTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSD 165
K+NKE +RKVYLCPEP+CVHHDP+RALGDLTGIKKHY RKHGE YAVQSD
Sbjct: 113 KSNKEVRRKVYLCPEPSCVHHDPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSD 172
Query: 166 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQP 210
WKAHSKTCGT+EYRCDCGT+FSRRDS+ITHRAFCDAL QESAR P
Sbjct: 173 WKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFCDALIQESARNP 217
>AT3G50700.1 | Symbols: ATIDD2 | ATIDD2 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 2); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:18851926-18853810 FORWARD
Length = 452
Score = 298 bits (763), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 129/163 (79%), Positives = 146/163 (89%)
Query: 46 KKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 105
KKKRN PG P+P++EVIALSPKTL+ATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKL+Q
Sbjct: 34 KKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 93
Query: 106 KTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSD 165
K+NKE K+KVY+CPE +CVHHDPSRALGDLTGIKKH+ RKHGE YAVQSD
Sbjct: 94 KSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 153
Query: 166 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR 208
WKAHSK CGT+EY+CDCGTLFSRRDSFITHRAFCDALA+E+AR
Sbjct: 154 WKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEENAR 196
>AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:26659140-26661109 REVERSE
Length = 500
Score = 295 bits (755), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 128/163 (78%), Positives = 143/163 (87%)
Query: 46 KKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 105
KKKRN PG P+PDAEVIALSPKTLMATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKL+Q
Sbjct: 32 KKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 91
Query: 106 KTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSD 165
++ KE ++KVY+CP CVHHDPSRALGDLTGIKKH+ RKHGE YAVQSD
Sbjct: 92 RSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSD 151
Query: 166 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR 208
WKAHSK CGT+EY+CDCGTLFSRRDSFITHRAFCDALA+ESA+
Sbjct: 152 WKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESAK 194
>AT1G03840.1 | Symbols: MGP | MGP (MAGPIE); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967595-970057 REVERSE
Length = 506
Score = 294 bits (752), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 128/163 (78%), Positives = 145/163 (88%)
Query: 46 KKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 105
KKKRN PG P+P+AEVIALSPKTLMATNRF+CE+C KGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 41 KKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 100
Query: 106 KTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSD 165
+T+KE +++VY+CPE +CVHH P+RALGDLTGIKKH+ RKHGE YAVQSD
Sbjct: 101 RTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSD 160
Query: 166 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR 208
WKAHSKTCGTREYRCDCGT+FSRRDSFITHRAFCDALA+E+AR
Sbjct: 161 WKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETAR 203
>AT1G55110.1 | Symbols: ATIDD7 | ATIDD7 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 7); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:20564073-20566292 REVERSE
Length = 455
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 132/168 (78%), Positives = 149/168 (88%), Gaps = 1/168 (0%)
Query: 46 KKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 105
K+KRNQPG P+P+AEV+ALSPKTLMATNRFICEVCNKGFQR+QNLQLH+RGHNLPWKLKQ
Sbjct: 63 KRKRNQPGNPDPEAEVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQ 122
Query: 106 KTNKEP-KRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQS 164
++NK+ ++KVY+CPEP CVHH PSRALGDLTGIKKH+ RKHGE YAVQS
Sbjct: 123 RSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQS 182
Query: 165 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQPPN 212
DWKAH+KTCGT+EY+CDCGTLFSRRDSFITHRAFCDALA+ESAR PN
Sbjct: 183 DWKAHAKTCGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESARAMPN 230
>AT3G13810.1 | Symbols: ATIDD11 | ATIDD11 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 11); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:4544948-4547307 FORWARD
Length = 513
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 130/166 (78%), Positives = 149/166 (89%), Gaps = 1/166 (0%)
Query: 45 QKKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK 104
QKK+RNQPG P+P++EVIALSPKTLMATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKLK
Sbjct: 69 QKKRRNQPGNPDPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 128
Query: 105 QKTNKEP-KRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQ 163
Q++NKE ++KVY+CPE +CVHHDPSRALGDLTGIKKH+ RKHGE YAVQ
Sbjct: 129 QRSNKEVIRKKVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQ 188
Query: 164 SDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQ 209
SD KAHSKTCGT+EYRCDCGTLFSRRDSFITHRAFC+ALA+E+AR+
Sbjct: 189 SDCKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCEALAEETARE 234
>AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding /
protein binding / protein homodimerization/
transcription factor/ zinc ion binding |
chr5:745848-748677 FORWARD
Length = 503
Score = 291 bits (745), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 130/164 (79%), Positives = 144/164 (87%), Gaps = 1/164 (0%)
Query: 46 KKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 105
KKKRNQPGTP+PDA+VIALSP TLMATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 53 KKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 106 KTNKEP-KRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQS 164
++ +E K+KVY+CP TCVHHD SRALGDLTGIKKHYSRKHGE YAVQS
Sbjct: 113 RSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQS 172
Query: 165 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR 208
DWKAH+KTCGTREY+CDCGTLFSR+DSFITHRAFCDAL +E AR
Sbjct: 173 DWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGAR 216
>AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr3:16607835-16609535 REVERSE
Length = 446
Score = 291 bits (744), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 131/164 (79%), Positives = 144/164 (87%), Gaps = 1/164 (0%)
Query: 46 KKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 105
K+KRN PG P+PDAEVIALSP +LM TNRFICEVCNKGF+R+QNLQLHRRGHNLPWKLKQ
Sbjct: 39 KRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQ 98
Query: 106 KTNKE-PKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQS 164
+TNKE K+KVY+CPE TCVHHDP+RALGDLTGIKKH+SRKHGE YAV S
Sbjct: 99 RTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMS 158
Query: 165 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR 208
DWKAHSK CGT+EYRCDCGTLFSR+DSFITHRAFCDALA+ESAR
Sbjct: 159 DWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFCDALAEESAR 202
>AT1G03840.2 | Symbols: MGP | MGP (MAGPIE); nucleic acid binding /
zinc ion binding | chr1:967595-970057 REVERSE
Length = 504
Score = 288 bits (737), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 128/163 (78%), Positives = 144/163 (88%), Gaps = 2/163 (1%)
Query: 46 KKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 105
KKKRN PG NP+AEVIALSPKTLMATNRF+CE+C KGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 41 KKKRNLPG--NPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 98
Query: 106 KTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSD 165
+T+KE +++VY+CPE +CVHH P+RALGDLTGIKKH+ RKHGE YAVQSD
Sbjct: 99 RTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSD 158
Query: 166 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR 208
WKAHSKTCGTREYRCDCGT+FSRRDSFITHRAFCDALA+E+AR
Sbjct: 159 WKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETAR 201
>AT5G44160.1 | Symbols: NUC | NUC (NUTCRACKER); nucleic acid binding
/ transcription factor/ zinc ion binding |
chr5:17790318-17792740 FORWARD
Length = 466
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 128/163 (78%), Positives = 143/163 (87%)
Query: 46 KKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 105
KKKRN PG P+P+AEVIALSP TLMATNRF+CEVC KGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 37 KKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQ 96
Query: 106 KTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSD 165
+T+KE +++VY+CPE TCVHH SRALGDLTGIKKH+ RKHGE YAVQSD
Sbjct: 97 RTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSD 156
Query: 166 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR 208
WKAHSKTCGTREYRCDCGT+FSRRDSFITHRAFCDALA+E+A+
Sbjct: 157 WKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETAK 199
>AT4G02670.1 | Symbols: ATIDD12 | ATIDD12 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 12); nucleic acid binding /
transcription factor/ zinc ion binding |
chr4:1176190-1178489 REVERSE
Length = 402
Score = 283 bits (724), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 127/164 (77%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
Query: 46 KKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 105
KKKR PG P+PDAEVIALSPKTL+ATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 53 KKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 106 KTNKEP-KRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQS 164
K KE K+KVY+CPE C HH PSRALGDLTGIKKH+ RKHGE YAVQS
Sbjct: 113 KNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQS 172
Query: 165 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR 208
DWKAH+K CGTR+YRCDCGTLFSR+D+FITHRAFCDALA+ESAR
Sbjct: 173 DWKAHTKICGTRDYRCDCGTLFSRKDTFITHRAFCDALAEESAR 216
>AT2G02080.2 | Symbols: ATIDD4 | ATIDD4 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 4) | chr2:518327-520618 REVERSE
Length = 439
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 119/141 (84%), Positives = 125/141 (88%)
Query: 70 MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRKVYLCPEPTCVHHDPS 129
MATNRFIC+VCNKGFQREQNLQLHRRGHNLPWKLKQK+ KE KRKVYLCPEPTCVHHDPS
Sbjct: 1 MATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPS 60
Query: 130 RALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 189
RALGDLTGIKKHY RKHGE YAVQSDWKAHSKTCGT+EYRCDCGT+FSRR
Sbjct: 61 RALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSRR 120
Query: 190 DSFITHRAFCDALAQESARQP 210
DS+ITHRAFCDAL QE+AR P
Sbjct: 121 DSYITHRAFCDALIQETARNP 141
>AT5G60470.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:24338196-24340016 FORWARD
Length = 392
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 142/186 (76%), Gaps = 5/186 (2%)
Query: 70 MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNK-EPKRKVYLCPEPTCVHHDP 128
MATNRF CE+CNKGFQREQNLQLH+RGHNLPWKLKQKTNK + K+KVY+CPE +CVHHDP
Sbjct: 1 MATNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKVYICPEKSCVHHDP 60
Query: 129 SRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSR 188
+RALGDLTGIKKH+SRKHGE YAV SDWKAH+K CG+RE+RCDCGTLFSR
Sbjct: 61 ARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGSREFRCDCGTLFSR 120
Query: 189 RDSFITHRAFCDALAQESAR--QPPNLSSAIGSHLYGSSSNNMGLALSHVGPQLSNMQPS 246
+DSFI+HR+FCD LA+ES++ P+ +A + + +NN L S + S+ +
Sbjct: 121 KDSFISHRSFCDVLAEESSKFFSVPSPLAANSTIATVTDTNNPILIQSQLDQ--SSTGTA 178
Query: 247 DLNNNN 252
DLN NN
Sbjct: 179 DLNVNN 184
>AT2G01940.1 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS
THALIANA INDETERMINATE(ID)-DOMAIN 15, SHOOT GRAVITROPISM
5); nucleic acid binding / transcription factor/ zinc
ion binding | chr2:432651-434916 FORWARD
Length = 445
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 139/206 (67%), Gaps = 11/206 (5%)
Query: 45 QKKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK-L 103
QK+KR GTP+PDAEV++LSP+TL+ ++R+ICE+CN+GFQR+QNLQ+HRR H +PWK L
Sbjct: 43 QKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLL 102
Query: 104 KQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXX-XXXXXXXXYAV 162
K+ N E K++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH YAV
Sbjct: 103 KRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAV 162
Query: 163 QSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDA--LAQESARQP------PNLS 214
QSD+KAH KTCGTR + CDCG +FSR +SFI H+ C A + +E R P P S
Sbjct: 163 QSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSARRVHREPPRPPQTAVTVPACS 222
Query: 215 SAIGSHLYG-SSSNNMGLALSHVGPQ 239
S S + SS N G ++ PQ
Sbjct: 223 SRTASTVSTPSSETNYGGTVAVTTPQ 248
>AT1G68130.1 | Symbols: ATIDD14 | ATIDD14 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25536147-25537980 FORWARD
Length = 419
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 92/157 (58%), Positives = 123/157 (78%), Gaps = 2/157 (1%)
Query: 45 QKKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK-L 103
QK+KR GTP+P+AEV++LSP+TL+ ++R++CE+CN+GFQR+QNLQ+HRR H +PWK L
Sbjct: 40 QKRKRRPAGTPDPEAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLL 99
Query: 104 KQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXX-XXXXXXXXYAV 162
K++TN+E +++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH YAV
Sbjct: 100 KRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWICERCSKGYAV 159
Query: 163 QSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFC 199
QSD+KAH KTCGTR + CDCG +FSR +SFI H+ C
Sbjct: 160 QSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 196
>AT2G01940.3 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS
THALIANA INDETERMINATE(ID)-DOMAIN 15, SHOOT GRAVITROPISM
5) | chr2:432651-434916 FORWARD
Length = 446
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 137/207 (66%), Gaps = 12/207 (5%)
Query: 45 QKKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK-L 103
QK+KR GTP+PDAEV++LSP+TL+ ++R+ICE+CN+GFQR+QNLQ+HRR H +PWK L
Sbjct: 43 QKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLL 102
Query: 104 KQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXXX-XXXXXXXXYAV 162
K+ N E K++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH YAV
Sbjct: 103 KRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAV 162
Query: 163 QSDWKAHSKTCGTREYRCDCGTLFS-RRDSFITHRAFCDA--LAQESARQP------PNL 213
QSD+KAH KTCGTR + CDCG S R +SFI H+ C A + +E R P P
Sbjct: 163 QSDYKAHLKTCGTRGHSCDCGFFSSFRVESFIEHQDNCSARRVHREPPRPPQTAVTVPAC 222
Query: 214 SSAIGSHLYG-SSSNNMGLALSHVGPQ 239
SS S + SS N G ++ PQ
Sbjct: 223 SSRTASTVSTPSSETNYGGTVAVTTPQ 249
>AT1G25250.1 | Symbols: ATIDD16 | ATIDD16 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 16); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:8849536-8851507 FORWARD
Length = 362
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 117/158 (74%), Gaps = 9/158 (5%)
Query: 56 NPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKL--KQKTNKEPKR 113
+PDAEV++LSP+TL+ ++R++CE+CN+GFQR+QNLQ+HRR H +PWKL + K ++E ++
Sbjct: 20 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRK 79
Query: 114 KVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHG-EXXXXXXXXXXXYAVQSDWKAHSKT 172
+VY+CPEPTC+HHDP ALGDL GIKKH+ RKH YAVQSD+KAH KT
Sbjct: 80 RVYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKT 139
Query: 173 CGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQP 210
CG+R + CDCG +FSR +SFI H+ C + RQP
Sbjct: 140 CGSRGHSCDCGRVFSRVESFIEHQDTC------TIRQP 171
>AT2G01940.2 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS
THALIANA INDETERMINATE(ID)-DOMAIN 15, SHOOT GRAVITROPISM
5); nucleic acid binding / zinc ion binding |
chr2:433231-434916 FORWARD
Length = 356
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 96/159 (60%), Gaps = 11/159 (6%)
Query: 92 LHRRGHNLPWKL-KQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXX 150
+HRR H +PWKL K+ N E K++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH
Sbjct: 1 MHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 151 X-XXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDA--LAQESA 207
YAVQSD+KAH KTCGTR + CDCG +FSR +SFI H+ C A + +E
Sbjct: 61 QWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSARRVHREPP 120
Query: 208 RQP------PNLSSAIGSHLYG-SSSNNMGLALSHVGPQ 239
R P P SS S + SS N G ++ PQ
Sbjct: 121 RPPQTAVTVPACSSRTASTVSTPSSETNYGGTVAVTTPQ 159
>AT1G68130.2 | Symbols: ATIDD14 | ATIDD14 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 14) | chr1:25536506-25537980
FORWARD
Length = 333
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 80/110 (72%), Gaps = 2/110 (1%)
Query: 92 LHRRGHNLPWKL-KQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEXX 150
+HRR H +PWKL K++TN+E +++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH
Sbjct: 1 MHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 151 X-XXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFC 199
YAVQSD+KAH KTCGTR + CDCG +FSR +SFI H+ C
Sbjct: 61 QWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 110
>AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:7653544-7654665 REVERSE
Length = 373
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 17/185 (9%)
Query: 45 QKKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK 104
+ K R++P + + D ++ L L+A C++C KGF+R+ NL++H R H +K +
Sbjct: 189 KDKHRSKPSSGSYD--ILELDVADLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKTR 246
Query: 105 Q----------KTNKEPKRKVYLCPEPTCV---HHDPSRALGDLTGIKKHYSRKHG-EXX 150
+ K K+ Y CP+ C H+ + L + K HY R H +
Sbjct: 247 EALISPTSQDKKGGYSLKKHYYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCPKMY 306
Query: 151 XXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRA-FCDALAQESARQ 209
++V SD + H K CG ++ C CGT FSR+D ++H + F + + +
Sbjct: 307 MCRRCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSLFLGHVPAHGSSK 366
Query: 210 PPNLS 214
PP ++
Sbjct: 367 PPTIT 371
>AT1G34370.1 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON
RHIZOTOXICITY 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12550980-12552479
FORWARD
Length = 499
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 55 PNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRK 114
P E++ L + ++A + C +C KGF+R+ NL++H RGH +K K K
Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 283
Query: 115 V----------YLCPEPTC---VHHDPSRALGDLTGIKKHYSRKHGEXXXX-XXXXXXXY 160
V Y CP C H + L + +K HY R H + +
Sbjct: 284 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKF 343
Query: 161 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF----CDALAQESARQPPNLSSA 216
+V +D K H K CG ++ C CGT FSR+D H A A+ E + + S+
Sbjct: 344 SVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEETKPSASTSTQ 403
Query: 217 IGSHLYGSSSNNMGLALSHVG 237
GS G +NN G+ ++G
Sbjct: 404 RGSSEGG--NNNQGMVGFNLG 422
>AT1G34370.2 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON
RHIZOTOXICITY 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12550980-12552479
FORWARD
Length = 499
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 55 PNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRK 114
P E++ L + ++A + C +C KGF+R+ NL++H RGH +K K K
Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 283
Query: 115 V----------YLCPEPTC---VHHDPSRALGDLTGIKKHYSRKHGEXXXX-XXXXXXXY 160
V Y CP C H + L + +K HY R H + +
Sbjct: 284 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKF 343
Query: 161 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF----CDALAQESARQPPNLSSA 216
+V +D K H K CG ++ C CGT FSR+D H A A+ E + + S+
Sbjct: 344 SVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEETKPSASTSTQ 403
Query: 217 IGSHLYGSSSNNMGLALSHVG 237
GS G +NN G+ ++G
Sbjct: 404 RGSSEGG--NNNQGMVGFNLG 422
>AT1G34370.3 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON
RHIZOTOXICITY 1); nucleic acid binding / zinc ion
binding | chr1:12551427-12552479 FORWARD
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 55 PNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRK 114
P E++ L + ++A + C +C KGF+R+ NL++H RGH +K K K
Sbjct: 75 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 134
Query: 115 V----------YLCPEPTC---VHHDPSRALGDLTGIKKHYSRKHGEXX-XXXXXXXXXY 160
V Y CP C H + L + +K HY R H + +
Sbjct: 135 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKF 194
Query: 161 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF----CDALAQESARQPPNLSSA 216
+V +D K H K CG ++ C CGT FSR+D H A A+ E + + S+
Sbjct: 195 SVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEETKPSASTSTQ 254
Query: 217 IGSHLYGSSSNNMGLALSHVG 237
GS G +NN G+ ++G
Sbjct: 255 RGSSEGG--NNNQGMVGFNLG 273
>AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4) |
chr3:7313765-7315798 REVERSE
Length = 412
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 62 IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKT--NKEPKRKVYL-- 117
I + LM +F C +C K F R N+Q+H GH ++ ++ +P + L
Sbjct: 243 IPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPC 302
Query: 118 -CPEPTC---VHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKTC 173
C P C + H +R L D ++ HY RKHG +AV+ DW+ H K C
Sbjct: 303 YCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNC 362
Query: 174 GTREYRCDCGTLFSRRDSFITH-RAF 198
G Y C CG+ F + S H +AF
Sbjct: 363 GKLWY-CSCGSDFKHKRSLKDHVKAF 387
>AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5) |
chr1:18993593-18995702 REVERSE
Length = 337
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 63/146 (43%), Gaps = 10/146 (6%)
Query: 62 IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKTNKEPKRKVY 116
I + L+ +F C +C K F R N+Q+H GH P L+ R
Sbjct: 165 IPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPC 224
Query: 117 LCPEPTC---VHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKTC 173
C P C + H ++ L D ++ HY RKHG +AV+ DW+ H K C
Sbjct: 225 FCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNC 284
Query: 174 GTREYRCDCGTLFSRRDSFITH-RAF 198
G Y C CG+ F + S H +AF
Sbjct: 285 GKLWY-CSCGSDFKHKRSLKDHVKAF 309
>AT1G34790.1 | Symbols: TT1 | TT1 (TRANSPARENT TESTA 1);
transcription factor | chr1:12763931-12765467 FORWARD
Length = 303
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 59 AEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNK--EPKRKV- 115
A I + L+ F C VC K F R NLQ+H GH ++ ++ K +P+ +
Sbjct: 129 AYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLG 188
Query: 116 ---YLCPEPTC---VHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAH 169
Y C E C + H S+ L D ++ HY RKHG AV+ DW+ H
Sbjct: 189 IPCYCCVE-GCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTH 247
Query: 170 SKTCGTREYRCDCGTLFSRRDSFITH-RAF 198
K CG R + C CG+ F + S H +AF
Sbjct: 248 EKNCGKR-WVCVCGSDFKHKRSLKDHVKAF 276
>AT1G13290.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr1:4550363-4551524 REVERSE
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 67 KTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRK-------VYLCP 119
+ L+ +F C VCNK F R N+Q+H GH ++ ++ + K Y C
Sbjct: 93 QILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCA 152
Query: 120 EPTC---VHHDPSRALGDLTGIKKHYSRKHG-EXXXXXXXXXXXYAVQSDWKAHSKTCGT 175
E C + H S+ L D ++ HY RKHG + +AV+ DW+ H K CG
Sbjct: 153 E-GCKNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCG- 210
Query: 176 REYRCDCGTLFSRRDSFITH-RAFCDALAQESA 207
+ + C CG+ F + S H RAF D A +
Sbjct: 211 KLWFCVCGSDFKHKRSLKDHVRAFGDGHAAHTV 243
>AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nucleic
acid binding / transcription factor/ zinc ion binding |
chr3:21381913-21384098 FORWARD
Length = 383
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 62 IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKT--NKEPKRKVYL-- 117
I + L+ +F C VC K F R N+Q+H GH ++ ++ +P + L
Sbjct: 204 IPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPC 263
Query: 118 -CPEPTC---VHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKTC 173
C P C + H ++ L D ++ HY RKHG +AV+ DW+ H K C
Sbjct: 264 YCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNC 323
Query: 174 GTREYRCDCGTLFSRRDSFITH-RAF 198
G Y C CG+ F + S H +AF
Sbjct: 324 GKLWY-CICGSDFKHKRSLKDHIKAF 348
>AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3) |
chr1:2610677-2613177 REVERSE
Length = 337
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 74 RFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNK---EP----KRKVYLCPEPTC--- 123
+F C +C+K F R N+Q+H GH ++ + K +P + Y C E C
Sbjct: 179 QFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAE-GCKNN 237
Query: 124 VHHDPSRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCG 183
++H S+ L D ++ HY RKHG AV+ DW+ H K CG Y C CG
Sbjct: 238 INHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWY-CTCG 296
Query: 184 TLFSRRDSFITH-RAF 198
+ F + S H R+F
Sbjct: 297 SDFKHKRSLKDHIRSF 312