Miyakogusa Predicted Gene

chr5.CM0357.770.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr5.CM0357.770.nc + phase: 0 
         (258 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22490.1 | Symbols:  | late embryogenesis abundant protein, p...   256   7e-69
AT3G22500.1 | Symbols: ATECP31 | ATECP31 (late embryogenesis abu...   234   5e-62
AT5G27980.1 | Symbols:  | seed maturation family protein | chr5:...   117   5e-27
AT1G03120.1 | Symbols: ATRAB28 | ATRAB28 (Arabidopsis thaliana r...   103   1e-22
AT5G53260.1 | Symbols:  | seed maturation family protein | chr5:...    65   5e-11
AT5G53270.1 | Symbols:  | seed maturation family protein | chr5:...    57   7e-09

>AT3G22490.1 | Symbols:  | late embryogenesis abundant protein,
           putative / LEA protein, putative | chr3:7969792-7970745
           REVERSE
          Length = 262

 Score =  256 bits (655), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 146/261 (55%), Positives = 166/261 (63%), Gaps = 10/261 (3%)

Query: 1   MSQE-QPRRTQPGQDPIKYGDVFPVSGDLAQKPVAPEDAAMMQSAETRVLGHTQPGGAAA 59
           MSQE QP+R Q   +P+ YGDVF VSG+LA KP+APEDA MMQ+AETRV GHTQ GGAAA
Sbjct: 1   MSQEEQPKRPQ---EPVTYGDVFEVSGELADKPIAPEDANMMQAAETRVFGHTQKGGAAA 57

Query: 60  VMQSAATRNEQAGLVGHRXXXXXXXXXXXXXXXXHVPGRRIITETVGGQVVGQFVEPTPV 119
           VMQSAAT N++ G V                    VPG R+ TE VGGQVVGQ+VEP PV
Sbjct: 58  VMQSAATANKRGGFVHPGDTTDLAAERGVTVAQTDVPGARVTTEFVGGQVVGQYVEPRPV 117

Query: 120 QTGP------IGAVRESAITIGEALEATAKTVGDKPVDQSDASAIQAAEVRATGSNEILP 173
            T        +G   +SAITIGEALEAT +T G+KPVDQSDA+AIQAAEVRA G+N I P
Sbjct: 118 ATAAAMEAEVVGLSLQSAITIGEALEATVQTAGNKPVDQSDAAAIQAAEVRACGTNVIAP 177

Query: 174 GGLXXXXXXXXXXXXECKSDQEKIKLADVLTGATAKLPADKAATLQDAEGVASAEVRNNP 233
           GG+                D++KIKL DVL GAT KL ADKA T QDAEGV SAE+RNNP
Sbjct: 178 GGIAASAQSAANHNATIDRDEDKIKLIDVLAGATGKLAADKAVTRQDAEGVVSAELRNNP 237

Query: 234 EXXXXXXXXXXXXXXXXRLNE 254
                            RLNE
Sbjct: 238 NLSTHPGGVAASITAAARLNE 258


>AT3G22500.1 | Symbols: ATECP31 | ATECP31 (late embryogenesis
           abundant protein ECP31) | chr3:7971927-7972872 REVERSE
          Length = 256

 Score =  234 bits (596), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 139/260 (53%), Positives = 159/260 (61%), Gaps = 14/260 (5%)

Query: 1   MSQEQPRRTQPGQDPIKYGDVFPVSGDLAQKPVAPEDAAMMQSAETRVLGHTQPGGAAAV 60
           MSQEQPRR +   +P+KYGDVF VSG+LA KP+APEDA MMQSAET V GHTQ GG AAV
Sbjct: 1   MSQEQPRRPR---EPVKYGDVFEVSGELADKPIAPEDAKMMQSAETHVFGHTQKGGPAAV 57

Query: 61  MQSAATRNEQAGLVGHRXXXXXXXXXXXXXXXXHVPGRRIITETVGGQVVGQFVEPTPVQ 120
           MQSAAT N + G V H                  VP   + TE VGGQVVGQ VEP  V 
Sbjct: 58  MQSAATTNIRGGFV-HPDDKTELVAERGATVEQTVPAATVTTEFVGGQVVGQHVEPRRV- 115

Query: 121 TGPIGAVR------ESAITIGEALEATAKTVGDKPVDQSDASAIQAAEVRATGSNEILPG 174
              + A R      +S ITIGEALEAT KT G+KPVDQSDA+AIQAAE+RA+G+N I   
Sbjct: 116 ---VAAARTDEEALQSTITIGEALEATVKTAGNKPVDQSDAAAIQAAEMRASGTNVIALA 172

Query: 175 GLXXXXXXXXXXXXECKSDQEKIKLADVLTGATAKLPADKAATLQDAEGVASAEVRNNPE 234
           G+                D+ KIKL DVLTGA  KL AD+A T +DAEGV SAE+RNNP+
Sbjct: 173 GVAASAQSAADHNATVDRDERKIKLRDVLTGAAGKLSADRAVTREDAEGVVSAEMRNNPK 232

Query: 235 XXXXXXXXXXXXXXXXRLNE 254
                           RLNE
Sbjct: 233 LCTHPGGVAASLTVAARLNE 252


>AT5G27980.1 | Symbols:  | seed maturation family protein |
           chr5:10015887-10016680 REVERSE
          Length = 192

 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/134 (51%), Positives = 85/134 (63%), Gaps = 3/134 (2%)

Query: 100 IITETVGGQVVGQFVEPTPVQTGPIGAVRESAITIGEALEATAKTVGDKPVDQSDASAIQ 159
           ++ E  G Q  G+ V    V   P+ +  E  ITIGEALEA   T G+KPV+ SDA+AIQ
Sbjct: 39  VVAEASGEQAEGE-VNQKKVVANPLKS--EGTITIGEALEAAVLTAGNKPVEWSDAAAIQ 95

Query: 160 AAEVRATGSNEILPGGLXXXXXXXXXXXXECKSDQEKIKLADVLTGATAKLPADKAATLQ 219
           AAEVRATG   I+PGG+               SD  K  LADVLTGA++KLP+DKAAT +
Sbjct: 96  AAEVRATGRTNIMPGGVAASAQSAATLNARIGSDDTKTTLADVLTGASSKLPSDKAATRK 155

Query: 220 DAEGVASAEVRNNP 233
           DAEGV  AE+RN+P
Sbjct: 156 DAEGVTGAEMRNDP 169


>AT1G03120.1 | Symbols: ATRAB28 | ATRAB28 (Arabidopsis thaliana
           responsive to abscisic acid 28) | chr1:752271-753140
           FORWARD
          Length = 182

 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 83/142 (58%), Gaps = 3/142 (2%)

Query: 113 FVEPTPVQTGPIGAVRESAITIGEALEATAKTVGDKPVDQSDASAIQAAEVRATGSNEIL 172
           F +P P     +G+V    +TIGEALEATA ++GDKPVD+ DA+AIQAAE RATG ++  
Sbjct: 42  FSQPDPT-VATMGSV--DTVTIGEALEATALSLGDKPVDRRDAAAIQAAETRATGESKGR 98

Query: 173 PGGLXXXXXXXXXXXXECKSDQEKIKLADVLTGATAKLPADKAATLQDAEGVASAEVRNN 232
           PGGL            +  S+++K+ +AD+LT A  +LP DK  T +DAE V  AE+R++
Sbjct: 99  PGGLAVAAQAAATTNEQTVSEEDKVNIADILTDAAERLPGDKVVTSEDAEAVVGAELRSS 158

Query: 233 PEXXXXXXXXXXXXXXXXRLNE 254
            E                RLN+
Sbjct: 159 SEMKTTPGGVADSMSAGARLNQ 180


>AT5G53260.1 | Symbols:  | seed maturation family protein |
           chr5:21621888-21622900 REVERSE
          Length = 176

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 62/123 (50%)

Query: 111 GQFVEPTPVQTGPIGAVRESAITIGEALEATAKTVGDKPVDQSDASAIQAAEVRATGSNE 170
           GQFV PT   +    A+   + T+ EAL+A +  VG KPV+ +D +AI+  E RA G + 
Sbjct: 28  GQFVGPTEEISTAAEALIGRSTTLTEALKAASMNVGHKPVETTDVAAIKEVETRAIGGDI 87

Query: 171 ILPGGLXXXXXXXXXXXXECKSDQEKIKLADVLTGATAKLPADKAATLQDAEGVASAEVR 230
              GG+            +   D EK  L DV+     K+  D+  T +DAE V  AE+ 
Sbjct: 88  ESEGGVTAVASKAVARNQKIGKDNEKTNLGDVIAEIDVKVTRDREVTSEDAEAVIRAELN 147

Query: 231 NNP 233
           ++P
Sbjct: 148 HSP 150


>AT5G53270.1 | Symbols:  | seed maturation family protein |
           chr5:21623497-21623976 REVERSE
          Length = 159

 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 52/101 (51%)

Query: 133 TIGEALEATAKTVGDKPVDQSDASAIQAAEVRATGSNEILPGGLXXXXXXXXXXXXECKS 192
           T+ EAL+A A  VG KPV+ +D +AI+  E RA G +    GG+            +   
Sbjct: 31  TLTEALKAAAINVGRKPVETTDLAAIKEVEARAIGGDIESDGGVTAVASKAVARNQKIGE 90

Query: 193 DQEKIKLADVLTGATAKLPADKAATLQDAEGVASAEVRNNP 233
           D EK  L DV+     K+  D+  T +DAE V  AE+ ++P
Sbjct: 91  DNEKTNLGDVIAEIDVKVTRDREVTSEDAEAVIRAELNHSP 131