Miyakogusa Predicted Gene
- chr5.CM0311.120.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr5.CM0311.120.nc + phase: 0
(573 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G02070.1 | Symbols: ATIDD5 | ATIDD5 (ARABIDOPSIS THALIANA IND... 318 4e-87
AT2G02080.1 | Symbols: ATIDD4 | ATIDD4 (ARABIDOPSIS THALIANA IND... 315 7e-86
AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein... 313 1e-85
AT3G50700.1 | Symbols: ATIDD2 | ATIDD2 (ARABIDOPSIS THALIANA IND... 295 6e-80
AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein... 293 2e-79
AT3G13810.1 | Symbols: ATIDD11 | ATIDD11 (ARABIDOPSIS THALIANA I... 293 2e-79
AT1G03840.1 | Symbols: MGP | MGP (MAGPIE); nucleic acid binding ... 292 3e-79
AT1G55110.1 | Symbols: ATIDD7 | ATIDD7 (ARABIDOPSIS THALIANA IND... 291 7e-79
AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding... 288 6e-78
AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein... 286 3e-77
AT5G44160.1 | Symbols: NUC | NUC (NUTCRACKER); nucleic acid bind... 286 3e-77
AT1G03840.2 | Symbols: MGP | MGP (MAGPIE); nucleic acid binding ... 285 5e-77
AT4G02670.1 | Symbols: ATIDD12 | ATIDD12 (ARABIDOPSIS THALIANA I... 281 9e-76
AT2G02080.2 | Symbols: ATIDD4 | ATIDD4 (ARABIDOPSIS THALIANA IND... 267 1e-71
AT5G60470.1 | Symbols: | zinc finger (C2H2 type) family protein... 244 8e-65
AT2G01940.1 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS... 210 2e-54
AT1G68130.1 | Symbols: ATIDD14 | ATIDD14 (ARABIDOPSIS THALIANA I... 210 2e-54
AT2G01940.3 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS... 201 1e-51
AT1G25250.1 | Symbols: ATIDD16 | ATIDD16 (ARABIDOPSIS THALIANA I... 197 2e-50
AT1G68130.2 | Symbols: ATIDD14 | ATIDD14 (ARABIDOPSIS THALIANA I... 139 4e-33
AT2G01940.2 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS... 137 2e-32
AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein... 84 2e-16
AT1G34370.1 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON RHIZOT... 84 3e-16
AT1G34370.2 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON RHIZOT... 84 3e-16
AT1G34370.3 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON RHIZOT... 82 8e-16
AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5)... 75 2e-13
AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4)... 74 2e-13
AT1G34790.1 | Symbols: TT1 | TT1 (TRANSPARENT TESTA 1); transcri... 74 2e-13
AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nuclei... 73 4e-13
AT1G13290.1 | Symbols: | zinc finger (C2H2 type) family protein... 73 6e-13
AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3)... 72 1e-12
>AT2G02070.1 | Symbols: ATIDD5 | ATIDD5 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 5); nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:505522-509153 FORWARD
Length = 602
Score = 318 bits (816), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 154/202 (76%), Positives = 163/202 (80%), Gaps = 9/202 (4%)
Query: 42 QKKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK 101
QKK+RNQP TP+ DAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK
Sbjct: 51 QKKKRNQPRTPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK 110
Query: 102 QKSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQS 161
QKS KE +RKVYLCPEP+CVHHDPSRALGDLTGIKKHY RKHG YAVQS
Sbjct: 111 QKSTKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQS 170
Query: 162 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLPNGLTPLGTN--LYG 219
DWKAHSKTCGT+EYRCDCGTLFSRRDSFITHRAFCDALAQESAR P LT L ++ YG
Sbjct: 171 DWKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTSLTSLPSHHFPYG 230
Query: 220 -------TPTNHMTLGLSQIGT 234
+ M LGLS +G
Sbjct: 231 QNTNNSNNNASSMILGLSHMGA 252
>AT2G02080.1 | Symbols: ATIDD4 | ATIDD4 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 4); transcription factor |
chr2:518327-521169 REVERSE
Length = 516
Score = 315 bits (806), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 140/167 (83%), Positives = 148/167 (88%)
Query: 41 PQKKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKL 100
P KKRRNQPG P+PDAEV+ALSPKTLMATNRFIC+VCNKGFQREQNLQLHRRGHNLPWKL
Sbjct: 52 PPKKRRNQPGNPNPDAEVVALSPKTLMATNRFICDVCNKGFQREQNLQLHRRGHNLPWKL 111
Query: 101 KQKSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQ 160
KQKS KE +RKVYLCPEPTCVHHDPSRALGDLTGIKKHY RKHG YAVQ
Sbjct: 112 KQKSTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQ 171
Query: 161 SDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLP 207
SDWKAHSKTCGT+EYRCDCGT+FSRRDS+ITHRAFCDAL QE+AR P
Sbjct: 172 SDWKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFCDALIQETARNP 218
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 61/158 (38%), Gaps = 47/158 (29%)
Query: 391 QHENMSS-PHMSATALLQKAAQMXXXXXXXXXXXXXXILIRGMXXXXXXXXXXXXXXXXE 449
+ EN+++ ++SATALLQKA QM L RG+
Sbjct: 366 REENLNAGSNVSATALLQKATQMGSVTSNDPSA-----LFRGLASSSNSSSVIANHFGGG 420
Query: 450 RDLVSDNNIATFGSDQRRGEGVNVIMRTNMENDRRNLHGLMXXXXXXXXXXXXFGNMQGN 509
R + +DNN NL GLM G++
Sbjct: 421 RIMENDNN--------------------------GNLQGLMNSLAAVNGGGGSGGSI--- 451
Query: 510 EKLPQNLDLSFG------GSDKLTLDFLGVGGMMRNIN 541
D+ FG GSDKLTLDFLGVGGM+RN+N
Sbjct: 452 ------FDVQFGDNGNMSGSDKLTLDFLGVGGMVRNVN 483
>AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr1:4990065-4992437 FORWARD
Length = 467
Score = 313 bits (803), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 141/167 (84%), Positives = 149/167 (89%)
Query: 41 PQKKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKL 100
P KKRRNQPG P+PDAEVIALSPKT+MATNRF+CEVCNKGFQREQNLQLHRRGHNLPWKL
Sbjct: 51 PPKKRRNQPGNPNPDAEVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKL 110
Query: 101 KQKSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQ 160
KQKSNKE RRKVYLCPEP+CVHHDP+RALGDLTGIKKHY RKHG YAVQ
Sbjct: 111 KQKSNKEVRRKVYLCPEPSCVHHDPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQ 170
Query: 161 SDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLP 207
SDWKAHSKTCGT+EYRCDCGT+FSRRDS+ITHRAFCDAL QESAR P
Sbjct: 171 SDWKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFCDALIQESARNP 217
>AT3G50700.1 | Symbols: ATIDD2 | ATIDD2 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 2); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:18851926-18853810 FORWARD
Length = 452
Score = 295 bits (754), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 127/163 (77%), Positives = 144/163 (88%)
Query: 43 KKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 102
KK+RN PG P P++EVIALSPKTL+ATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKL+Q
Sbjct: 34 KKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 93
Query: 103 KSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQSD 162
KSNKE ++KVY+CPE +CVHHDPSRALGDLTGIKKH+ RKHG YAVQSD
Sbjct: 94 KSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 153
Query: 163 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR 205
WKAHSK CGT+EY+CDCGTLFSRRDSFITHRAFCDALA+E+AR
Sbjct: 154 WKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEENAR 196
>AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:26659140-26661109 REVERSE
Length = 500
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 128/163 (78%), Positives = 141/163 (86%)
Query: 43 KKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 102
KK+RN PG P PDAEVIALSPKTLMATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKL+Q
Sbjct: 32 KKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 91
Query: 103 KSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQSD 162
+S KE R+KVY+CP CVHHDPSRALGDLTGIKKH+ RKHG YAVQSD
Sbjct: 92 RSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSD 151
Query: 163 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR 205
WKAHSK CGT+EY+CDCGTLFSRRDSFITHRAFCDALA+ESA+
Sbjct: 152 WKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESAK 194
>AT3G13810.1 | Symbols: ATIDD11 | ATIDD11 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 11); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:4544948-4547307 FORWARD
Length = 513
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 132/165 (80%), Positives = 146/165 (88%), Gaps = 1/165 (0%)
Query: 42 QKKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK 101
QKKRRNQPG P P++EVIALSPKTLMATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKLK
Sbjct: 69 QKKRRNQPGNPDPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 128
Query: 102 QKSNKEP-RRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQ 160
Q+SNKE R+KVY+CPE +CVHHDPSRALGDLTGIKKH+ RKHG YAVQ
Sbjct: 129 QRSNKEVIRKKVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQ 188
Query: 161 SDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR 205
SD KAHSKTCGT+EYRCDCGTLFSRRDSFITHRAFC+ALA+E+AR
Sbjct: 189 SDCKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCEALAEETAR 233
>AT1G03840.1 | Symbols: MGP | MGP (MAGPIE); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967595-970057 REVERSE
Length = 506
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 127/164 (77%), Positives = 144/164 (87%)
Query: 43 KKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 102
KK+RN PG P P+AEVIALSPKTLMATNRF+CE+C KGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 41 KKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 100
Query: 103 KSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQSD 162
+++KE R++VY+CPE +CVHH P+RALGDLTGIKKH+ RKHG YAVQSD
Sbjct: 101 RTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSD 160
Query: 163 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARL 206
WKAHSKTCGTREYRCDCGT+FSRRDSFITHRAFCDALA+E+ARL
Sbjct: 161 WKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETARL 204
>AT1G55110.1 | Symbols: ATIDD7 | ATIDD7 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 7); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:20564073-20566292 REVERSE
Length = 455
Score = 291 bits (745), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 133/176 (75%), Positives = 151/176 (85%), Gaps = 2/176 (1%)
Query: 43 KKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 102
K++RNQPG P P+AEV+ALSPKTLMATNRFICEVCNKGFQR+QNLQLH+RGHNLPWKLKQ
Sbjct: 63 KRKRNQPGNPDPEAEVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQ 122
Query: 103 KSNKEP-RRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQS 161
+SNK+ R+KVY+CPEP CVHH PSRALGDLTGIKKH+ RKHG YAVQS
Sbjct: 123 RSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQS 182
Query: 162 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR-LPNGLTPLGTN 216
DWKAH+KTCGT+EY+CDCGTLFSRRDSFITHRAFCDALA+ESAR +PN + +N
Sbjct: 183 DWKAHAKTCGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESARAMPNPIMIQASN 238
>AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding /
protein binding / protein homodimerization/
transcription factor/ zinc ion binding |
chr5:745848-748677 FORWARD
Length = 503
Score = 288 bits (737), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 128/165 (77%), Positives = 143/165 (86%), Gaps = 1/165 (0%)
Query: 43 KKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 102
KK+RNQPGTP PDA+VIALSP TLMATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 53 KKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 103 KSNKEP-RRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQS 161
+S +E ++KVY+CP TCVHHD SRALGDLTGIKKHYSRKHG YAVQS
Sbjct: 113 RSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQS 172
Query: 162 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARL 206
DWKAH+KTCGTREY+CDCGTLFSR+DSFITHRAFCDAL +E AR+
Sbjct: 173 DWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARM 217
>AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr3:16607835-16609535 REVERSE
Length = 446
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 127/165 (76%), Positives = 142/165 (86%), Gaps = 1/165 (0%)
Query: 43 KKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 102
K++RN PG P PDAEVIALSP +LM TNRFICEVCNKGF+R+QNLQLHRRGHNLPWKLKQ
Sbjct: 39 KRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQ 98
Query: 103 KSNKE-PRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQS 161
++NKE ++KVY+CPE TCVHHDP+RALGDLTGIKKH+SRKHG YAV S
Sbjct: 99 RTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMS 158
Query: 162 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARL 206
DWKAHSK CGT+EYRCDCGTLFSR+DSFITHRAFCDALA+ESAR
Sbjct: 159 DWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFCDALAEESARF 203
>AT5G44160.1 | Symbols: NUC | NUC (NUTCRACKER); nucleic acid binding
/ transcription factor/ zinc ion binding |
chr5:17790318-17792740 FORWARD
Length = 466
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 130/178 (73%), Positives = 146/178 (82%), Gaps = 5/178 (2%)
Query: 43 KKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 102
KK+RN PG P P+AEVIALSP TLMATNRF+CEVC KGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 37 KKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQ 96
Query: 103 KSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQSD 162
+++KE R++VY+CPE TCVHH SRALGDLTGIKKH+ RKHG YAVQSD
Sbjct: 97 RTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSD 156
Query: 163 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLP-----NGLTPLGT 215
WKAHSKTCGTREYRCDCGT+FSRRDSFITHRAFCDALA+E+A++ NGL G
Sbjct: 157 WKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETAKINAVSHLNGLAAAGA 214
>AT1G03840.2 | Symbols: MGP | MGP (MAGPIE); nucleic acid binding /
zinc ion binding | chr1:967595-970057 REVERSE
Length = 504
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 126/164 (76%), Positives = 144/164 (87%), Gaps = 2/164 (1%)
Query: 43 KKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 102
KK+RN PG +P+AEVIALSPKTLMATNRF+CE+C KGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 41 KKKRNLPG--NPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 98
Query: 103 KSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQSD 162
+++KE R++VY+CPE +CVHH P+RALGDLTGIKKH+ RKHG YAVQSD
Sbjct: 99 RTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSD 158
Query: 163 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARL 206
WKAHSKTCGTREYRCDCGT+FSRRDSFITHRAFCDALA+E+ARL
Sbjct: 159 WKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETARL 202
>AT4G02670.1 | Symbols: ATIDD12 | ATIDD12 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 12); nucleic acid binding /
transcription factor/ zinc ion binding |
chr4:1176190-1178489 REVERSE
Length = 402
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 125/165 (75%), Positives = 140/165 (84%), Gaps = 1/165 (0%)
Query: 43 KKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 102
KK+R PG P PDAEVIALSPKTL+ATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 53 KKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 103 KSNKEP-RRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQS 161
K+ KE ++KVY+CPE C HH PSRALGDLTGIKKH+ RKHG YAVQS
Sbjct: 113 KNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQS 172
Query: 162 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARL 206
DWKAH+K CGTR+YRCDCGTLFSR+D+FITHRAFCDALA+ESARL
Sbjct: 173 DWKAHTKICGTRDYRCDCGTLFSRKDTFITHRAFCDALAEESARL 217
>AT2G02080.2 | Symbols: ATIDD4 | ATIDD4 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 4) | chr2:518327-520618 REVERSE
Length = 439
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 118/141 (83%), Positives = 124/141 (87%)
Query: 67 MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEPRRKVYLCPEPTCVHHDPS 126
MATNRFIC+VCNKGFQREQNLQLHRRGHNLPWKLKQKS KE +RKVYLCPEPTCVHHDPS
Sbjct: 1 MATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPS 60
Query: 127 RALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 186
RALGDLTGIKKHY RKHG YAVQSDWKAHSKTCGT+EYRCDCGT+FSRR
Sbjct: 61 RALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSRR 120
Query: 187 DSFITHRAFCDALAQESARLP 207
DS+ITHRAFCDAL QE+AR P
Sbjct: 121 DSYITHRAFCDALIQETARNP 141
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 61/158 (38%), Gaps = 47/158 (29%)
Query: 391 QHENMSS-PHMSATALLQKAAQMXXXXXXXXXXXXXXILIRGMXXXXXXXXXXXXXXXXE 449
+ EN+++ ++SATALLQKA QM L RG+
Sbjct: 289 REENLNAGSNVSATALLQKATQMGSVTSNDPSA-----LFRGLASSSNSSSVIANHFGGG 343
Query: 450 RDLVSDNNIATFGSDQRRGEGVNVIMRTNMENDRRNLHGLMXXXXXXXXXXXXFGNMQGN 509
R + +DNN NL GLM G++
Sbjct: 344 RIMENDNN--------------------------GNLQGLMNSLAAVNGGGGSGGSI--- 374
Query: 510 EKLPQNLDLSFG------GSDKLTLDFLGVGGMMRNIN 541
D+ FG GSDKLTLDFLGVGGM+RN+N
Sbjct: 375 ------FDVQFGDNGNMSGSDKLTLDFLGVGGMVRNVN 406
>AT5G60470.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:24338196-24340016 FORWARD
Length = 392
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 111/170 (65%), Positives = 134/170 (78%), Gaps = 4/170 (2%)
Query: 67 MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNK-EPRRKVYLCPEPTCVHHDP 125
MATNRF CE+CNKGFQREQNLQLH+RGHNLPWKLKQK+NK + ++KVY+CPE +CVHHDP
Sbjct: 1 MATNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKVYICPEKSCVHHDP 60
Query: 126 SRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSR 185
+RALGDLTGIKKH+SRKHG YAV SDWKAH+K CG+RE+RCDCGTLFSR
Sbjct: 61 ARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGSREFRCDCGTLFSR 120
Query: 186 RDSFITHRAFCDALAQESARLPNGLTPLGTN---LYGTPTNHMTLGLSQI 232
+DSFI+HR+FCD LA+ES++ + +PL N T TN+ L SQ+
Sbjct: 121 KDSFISHRSFCDVLAEESSKFFSVPSPLAANSTIATVTDTNNPILIQSQL 170
>AT2G01940.1 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS
THALIANA INDETERMINATE(ID)-DOMAIN 15, SHOOT GRAVITROPISM
5); nucleic acid binding / transcription factor/ zinc
ion binding | chr2:432651-434916 FORWARD
Length = 445
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 121/159 (76%), Gaps = 2/159 (1%)
Query: 42 QKKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK-L 100
QK++R GTP PDAEV++LSP+TL+ ++R+ICE+CN+GFQR+QNLQ+HRR H +PWK L
Sbjct: 43 QKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLL 102
Query: 101 KQKSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXX-YAV 159
K+ +N E +++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH YAV
Sbjct: 103 KRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAV 162
Query: 160 QSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDA 198
QSD+KAH KTCGTR + CDCG +FSR +SFI H+ C A
Sbjct: 163 QSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSA 201
>AT1G68130.1 | Symbols: ATIDD14 | ATIDD14 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25536147-25537980 FORWARD
Length = 419
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 91/159 (57%), Positives = 123/159 (77%), Gaps = 2/159 (1%)
Query: 40 MPQKKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK 99
+ QK++R GTP P+AEV++LSP+TL+ ++R++CE+CN+GFQR+QNLQ+HRR H +PWK
Sbjct: 38 VTQKRKRRPAGTPDPEAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK 97
Query: 100 -LKQKSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXX-Y 157
LK+++N+E R++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH Y
Sbjct: 98 LLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWICERCSKGY 157
Query: 158 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFC 196
AVQSD+KAH KTCGTR + CDCG +FSR +SFI H+ C
Sbjct: 158 AVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 196
>AT2G01940.3 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS
THALIANA INDETERMINATE(ID)-DOMAIN 15, SHOOT GRAVITROPISM
5) | chr2:432651-434916 FORWARD
Length = 446
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 92/160 (57%), Positives = 119/160 (74%), Gaps = 3/160 (1%)
Query: 42 QKKRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK-L 100
QK++R GTP PDAEV++LSP+TL+ ++R+ICE+CN+GFQR+QNLQ+HRR H +PWK L
Sbjct: 43 QKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLL 102
Query: 101 KQKSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXX-YAV 159
K+ +N E +++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH YAV
Sbjct: 103 KRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAV 162
Query: 160 QSDWKAHSKTCGTREYRCDCGTLFS-RRDSFITHRAFCDA 198
QSD+KAH KTCGTR + CDCG S R +SFI H+ C A
Sbjct: 163 QSDYKAHLKTCGTRGHSCDCGFFSSFRVESFIEHQDNCSA 202
>AT1G25250.1 | Symbols: ATIDD16 | ATIDD16 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 16); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:8849536-8851507 FORWARD
Length = 362
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 85/146 (58%), Positives = 112/146 (76%), Gaps = 3/146 (2%)
Query: 54 PDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKL--KQKSNKEPRRK 111
PDAEV++LSP+TL+ ++R++CE+CN+GFQR+QNLQ+HRR H +PWKL + K ++E R++
Sbjct: 21 PDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRKR 80
Query: 112 VYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXX-YAVQSDWKAHSKTC 170
VY+CPEPTC+HHDP ALGDL GIKKH+ RKH YAVQSD+KAH KTC
Sbjct: 81 VYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKTC 140
Query: 171 GTREYRCDCGTLFSRRDSFITHRAFC 196
G+R + CDCG +FSR +SFI H+ C
Sbjct: 141 GSRGHSCDCGRVFSRVESFIEHQDTC 166
>AT1G68130.2 | Symbols: ATIDD14 | ATIDD14 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 14) | chr1:25536506-25537980
FORWARD
Length = 333
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 80/110 (72%), Gaps = 2/110 (1%)
Query: 89 LHRRGHNLPWKL-KQKSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXX 147
+HRR H +PWKL K+++N+E R++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH
Sbjct: 1 MHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 148 XXXXXXXXX-YAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFC 196
YAVQSD+KAH KTCGTR + CDCG +FSR +SFI H+ C
Sbjct: 61 QWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 110
>AT2G01940.2 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS
THALIANA INDETERMINATE(ID)-DOMAIN 15, SHOOT GRAVITROPISM
5); nucleic acid binding / zinc ion binding |
chr2:433231-434916 FORWARD
Length = 356
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 79/112 (70%), Gaps = 2/112 (1%)
Query: 89 LHRRGHNLPWKL-KQKSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGXXX 147
+HRR H +PWKL K+ +N E +++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH
Sbjct: 1 MHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 148 XXXXXXXXX-YAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDA 198
YAVQSD+KAH KTCGTR + CDCG +FSR +SFI H+ C A
Sbjct: 61 QWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSA 112
>AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:7653544-7654665 REVERSE
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 17/170 (10%)
Query: 41 PQK-KRRNQPGTPSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK 99
P+K K R++P + S D ++ L L+A C++C KGF+R+ NL++H R H +K
Sbjct: 187 PKKDKHRSKPSSGSYD--ILELDVADLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYK 244
Query: 100 LKQ----------KSNKEPRRKVYLCPEPTCV---HHDPSRALGDLTGIKKHYSRKHG-X 145
++ K ++ Y CP+ C H+ + L + K HY R H
Sbjct: 245 TREALISPTSQDKKGGYSLKKHYYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCPK 304
Query: 146 XXXXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 195
++V SD + H K CG ++ C CGT FSR+D ++H +
Sbjct: 305 MYMCRRCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSL 354
>AT1G34370.1 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON
RHIZOTOXICITY 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12550980-12552479
FORWARD
Length = 499
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 52 PSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK---QKSNKEP 108
P E++ L + ++A + C +C KGF+R+ NL++H RGH +K K NKE
Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 283
Query: 109 R-------RKVYLCPEPTC---VHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXX-XXXY 157
K Y CP C H + L + +K HY R H +
Sbjct: 284 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKF 343
Query: 158 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 195
+V +D K H K CG ++ C CGT FSR+D H A
Sbjct: 344 SVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIAL 381
>AT1G34370.2 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON
RHIZOTOXICITY 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12550980-12552479
FORWARD
Length = 499
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 52 PSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK---QKSNKEP 108
P E++ L + ++A + C +C KGF+R+ NL++H RGH +K K NKE
Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 283
Query: 109 R-------RKVYLCPEPTC---VHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXX-XXXY 157
K Y CP C H + L + +K HY R H +
Sbjct: 284 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKF 343
Query: 158 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 195
+V +D K H K CG ++ C CGT FSR+D H A
Sbjct: 344 SVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIAL 381
>AT1G34370.3 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON
RHIZOTOXICITY 1); nucleic acid binding / zinc ion
binding | chr1:12551427-12552479 FORWARD
Length = 350
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 52 PSPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK---QKSNKEP 108
P E++ L + ++A + C +C KGF+R+ NL++H RGH +K K NKE
Sbjct: 75 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 134
Query: 109 RR-------KVYLCPEPTC---VHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXX-XXXY 157
K Y CP C H + L + +K HY R H +
Sbjct: 135 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKF 194
Query: 158 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 195
+V +D K H K CG ++ C CGT FSR+D H A
Sbjct: 195 SVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIAL 232
>AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5) |
chr1:18993593-18995702 REVERSE
Length = 337
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 21/170 (12%)
Query: 59 IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEPR-----RKVY 113
I + L+ +F C +C K F R N+Q+H GH ++ +S + + R
Sbjct: 165 IPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPC 224
Query: 114 LCPEPTC---VHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTC 170
C P C + H ++ L D ++ HY RKHG +AV+ DW+ H K C
Sbjct: 225 FCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNC 284
Query: 171 GTREYRCDCGTLFSRRDSFITH-RAFCDALAQESARLPNGLTPLGTNLYG 219
G Y C CG+ F + S H +AF NG P G + +G
Sbjct: 285 GKLWY-CSCGSDFKHKRSLKDHVKAF-----------GNGHVPCGIDSFG 322
>AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4) |
chr3:7313765-7315798 REVERSE
Length = 412
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 59 IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKS--NKEPRRKVYL-- 114
I + LM +F C +C K F R N+Q+H GH ++ +S +P + L
Sbjct: 243 IPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPC 302
Query: 115 -CPEPTC---VHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTC 170
C P C + H +R L D ++ HY RKHG +AV+ DW+ H K C
Sbjct: 303 YCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNC 362
Query: 171 GTREYRCDCGTLFSRRDSFITH-RAF 195
G Y C CG+ F + S H +AF
Sbjct: 363 GKLWY-CSCGSDFKHKRSLKDHVKAF 387
>AT1G34790.1 | Symbols: TT1 | TT1 (TRANSPARENT TESTA 1);
transcription factor | chr1:12763931-12765467 FORWARD
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 53 SPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNK--EPRR 110
S A I + L+ F C VC K F R NLQ+H GH ++ +S K +PR
Sbjct: 126 SGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRA 185
Query: 111 KV----YLCPEPTC---VHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQSDW 163
+ Y C E C + H S+ L D ++ HY RKHG AV+ DW
Sbjct: 186 MLGIPCYCCVE-GCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDW 244
Query: 164 KAHSKTCGTREYRCDCGTLFSRRDSFITH-RAF 195
+ H K CG R + C CG+ F + S H +AF
Sbjct: 245 RTHEKNCGKR-WVCVCGSDFKHKRSLKDHVKAF 276
>AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nucleic
acid binding / transcription factor/ zinc ion binding |
chr3:21381913-21384098 FORWARD
Length = 383
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 59 IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKS--NKEP----RRKV 112
I + L+ +F C VC K F R N+Q+H GH ++ +S +P R
Sbjct: 204 IPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPC 263
Query: 113 YLCPEPTC---VHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQSDWKAHSKT 169
Y C P C + H ++ L D ++ HY RKHG +AV+ DW+ H K
Sbjct: 264 YCC-APGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKN 322
Query: 170 CGTREYRCDCGTLFSRRDSFITH-RAF 195
CG Y C CG+ F + S H +AF
Sbjct: 323 CGKLWY-CICGSDFKHKRSLKDHIKAF 348
>AT1G13290.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr1:4550363-4551524 REVERSE
Length = 302
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 66 LMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKL-------KQKSNKEPRRKVYLCPEP 118
L+ +F C VCNK F R N+Q+H GH ++ + S+ R Y C E
Sbjct: 95 LVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAE- 153
Query: 119 TC---VHHDPSRALGDLTGIKKHYSRKHGXX-XXXXXXXXXXYAVQSDWKAHSKTCGTRE 174
C + H S+ L D ++ HY RKHG +AV+ DW+ H K CG +
Sbjct: 154 GCKNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCG-KL 212
Query: 175 YRCDCGTLFSRRDSFITH-RAFCDALAQESA 204
+ C CG+ F + S H RAF D A +
Sbjct: 213 WFCVCGSDFKHKRSLKDHVRAFGDGHAAHTV 243
>AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3) |
chr1:2610677-2613177 REVERSE
Length = 337
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 71 RFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNK---EP----RRKVYLCPEPTC--- 120
+F C +C+K F R N+Q+H GH ++ S K +P R Y C E C
Sbjct: 179 QFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAE-GCKNN 237
Query: 121 VHHDPSRALGDLTGIKKHYSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCG 180
++H S+ L D ++ HY RKHG AV+ DW+ H K CG Y C CG
Sbjct: 238 INHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWY-CTCG 296
Query: 181 TLFSRRDSFITH-RAF 195
+ F + S H R+F
Sbjct: 297 SDFKHKRSLKDHIRSF 312