Miyakogusa Predicted Gene

chr5.CM0200.1250.nc

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr5.CM0200.1250.nc + phase: 0 
         (257 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G34215.2 | Symbols:  | Encodes a member of the SGNH-hydrolase...   322   1e-88
AT4G34215.1 | Symbols:  | hydrolase | chr4:16380207-16381196 REV...   322   1e-88
AT3G53010.1 | Symbols:  | similar to unknown protein [Arabidopsi...   259   1e-69

>AT4G34215.2 | Symbols:  | Encodes a member of the SGNH-hydrolase
           superfamily of enzymes. The enzymes of the
           SGNH-hydrolase superfamily facilitate the hydrolysis of
           ester, thioester and amide bonds in a range of
           substrates including complex polysaccharides,
           lysophospholipids, acyl-CoA esters and other compounds.
           | chr4:16380207-16381196 REVERSE
          Length = 260

 Score =  322 bits (826), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 165/250 (66%), Positives = 189/250 (75%), Gaps = 6/250 (2%)

Query: 9   PNEHPPKTKRQIFILSGQSNMAGRGGVIKNPHHHPNKRWDGVVPPECHPDPSILRLSAAL 68
           P    P    QIFILSGQSNMAGRGGV K+ HH+    WD ++PPEC P+ SILRLSA L
Sbjct: 13  PEIQSPIPPNQIFILSGQSNMAGRGGVFKD-HHNNRWVWDKILPPECAPNSSILRLSADL 71

Query: 69  RWEPAHEPLHTDIDTKKVCGVGPGMCFANAVRRRVGGE---FGLVPCAVGGTPMKEWARG 125
           RWE AHEPLH DIDT KVCGVGPGM FANAV+ R+  +    GLVPCA GGT +KEW RG
Sbjct: 72  RWEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERG 131

Query: 126 EELYENMVKRAKFSVTGDHGGEIKALLWFQGESDTSSEHDAEAYKVNMETLIHNVRQDLN 185
             LYE MVKR + S     GGEIKA+LW+QGESD    HDAE+Y  NM+ LI N+R DLN
Sbjct: 132 SHLYERMVKRTEESRK--CGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLN 189

Query: 186 LPSLPIIQVAIASGFEYMEKVREAQKGIELPNVICVDAKGFQLKEDNLHLTLEAQVKLGH 245
           LPSLPIIQVAIASG  Y++KVREAQ G++L NV+CVDAKG  LK DNLHLT EAQV+LG 
Sbjct: 190 LPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGL 249

Query: 246 MLAEAYLTHF 255
            LA+AYL++F
Sbjct: 250 SLAQAYLSNF 259


>AT4G34215.1 | Symbols:  | hydrolase | chr4:16380207-16381196
           REVERSE
          Length = 260

 Score =  322 bits (826), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 165/250 (66%), Positives = 189/250 (75%), Gaps = 6/250 (2%)

Query: 9   PNEHPPKTKRQIFILSGQSNMAGRGGVIKNPHHHPNKRWDGVVPPECHPDPSILRLSAAL 68
           P    P    QIFILSGQSNMAGRGGV K+ HH+    WD ++PPEC P+ SILRLSA L
Sbjct: 13  PEIQSPIPPNQIFILSGQSNMAGRGGVFKD-HHNNRWVWDKILPPECAPNSSILRLSADL 71

Query: 69  RWEPAHEPLHTDIDTKKVCGVGPGMCFANAVRRRVGGE---FGLVPCAVGGTPMKEWARG 125
           RWE AHEPLH DIDT KVCGVGPGM FANAV+ R+  +    GLVPCA GGT +KEW RG
Sbjct: 72  RWEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERG 131

Query: 126 EELYENMVKRAKFSVTGDHGGEIKALLWFQGESDTSSEHDAEAYKVNMETLIHNVRQDLN 185
             LYE MVKR + S     GGEIKA+LW+QGESD    HDAE+Y  NM+ LI N+R DLN
Sbjct: 132 SHLYERMVKRTEESRK--CGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLN 189

Query: 186 LPSLPIIQVAIASGFEYMEKVREAQKGIELPNVICVDAKGFQLKEDNLHLTLEAQVKLGH 245
           LPSLPIIQVAIASG  Y++KVREAQ G++L NV+CVDAKG  LK DNLHLT EAQV+LG 
Sbjct: 190 LPSLPIIQVAIASGGGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGL 249

Query: 246 MLAEAYLTHF 255
            LA+AYL++F
Sbjct: 250 SLAQAYLSNF 259


>AT3G53010.1 | Symbols:  | similar to unknown protein [Arabidopsis
           thaliana] (TAIR:AT4G34215.2); similar to hydrolase
           [Arabidopsis thaliana] (TAIR:AT4G34215.1); similar to
           unnamed protein product [Vitis vinifera]
           (GB:CAO47861.1); contains InterPro domain Protein of
           unknown function DUF303, acetylesterase putative
           (InterPro:IPR005181) | chr3:19667581-19668906 REVERSE
          Length = 297

 Score =  259 bits (662), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 130/250 (52%), Positives = 168/250 (67%), Gaps = 10/250 (4%)

Query: 11  EHPPKTKRQ-------IFILSGQSNMAGRGGVIKNPHHHPNKRWDGVVPPECHPDPSILR 63
           + PP  + Q       IFIL+GQSNMAGRGGV  +   +    WDGV+PPEC  +PSILR
Sbjct: 15  QSPPHLQSQTITRNISIFILAGQSNMAGRGGVYNDTATN-TTVWDGVIPPECRSNPSILR 73

Query: 64  LSAALRWEPAHEPLHTDIDTKKVCGVGPGMCFANAVRRRVGGEFGLVPCAVGGTPMKEWA 123
           L++ L W+ A EPLH DID  K  GVGPGM FAN V  R G + GLVPC++GGT + +W 
Sbjct: 74  LTSKLEWKEAKEPLHVDIDINKTNGVGPGMPFANRVVNRFG-QVGLVPCSIGGTKLSQWQ 132

Query: 124 RGEELYENMVKRAKFSVTGDHGGEIKALLWFQGESDTSSEHDAEAYKVNMETLIHNVRQD 183
           +GE LYE  VKRAK ++    GG  +A+LW+QGESDT    DA  YK  +     ++R D
Sbjct: 133 KGEFLYEETVKRAKAAMASGGGGSYRAVLWYQGESDTVDMVDASVYKKRLVKFFSDLRND 192

Query: 184 LNLPSLPIIQVAIASGF-EYMEKVREAQKGIELPNVICVDAKGFQLKEDNLHLTLEAQVK 242
           L  P+LPIIQVA+A+G   Y++ VR+AQ   +L NV CVDA+G  L+ D LHLT  +QV+
Sbjct: 193 LQHPNLPIIQVALATGAGPYLDAVRKAQLKTDLENVYCVDARGLPLEPDGLHLTTSSQVQ 252

Query: 243 LGHMLAEAYL 252
           LGHM+AE++L
Sbjct: 253 LGHMIAESFL 262