Miyakogusa Predicted Gene

chr5.CM0148.500.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr5.CM0148.500.nd - phase: 0 
         (155 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G52240.1 | Symbols: ATMP1, ATMAPR5, MSBP1 | MSBP1 (MEMBRANE S...   130   4e-31
AT3G48890.1 | Symbols: ATMAPR3, MSBP2, ATMP2 | ATMP2 (MEMBRANE S...   129   7e-31
AT2G24940.1 | Symbols: ATMAPR2 | ATMAPR2 (ARABIDOPSIS THALIANA M...    73   8e-14
AT4G14965.1 | Symbols: ATMAPR4 | ATMAPR4 (ARABIDOPSIS THALIANA M...    51   2e-07

>AT5G52240.1 | Symbols: ATMP1, ATMAPR5, MSBP1 | MSBP1 (MEMBRANE
           STEROID BINDING PROTEIN 1) | chr5:21230347-21231783
           FORWARD
          Length = 220

 Score =  130 bits (326), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/66 (90%), Positives = 62/66 (93%)

Query: 41  SRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFSEKYV 100
           SRMFYGPGGPYALFAGKDASRALAKMSFEEKDLT D+SGLGPFEL+ALQDWEYKF  KY 
Sbjct: 106 SRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYA 165

Query: 101 KVGTVK 106
           KVGTVK
Sbjct: 166 KVGTVK 171


>AT3G48890.1 | Symbols: ATMAPR3, MSBP2, ATMP2 | ATMP2 (MEMBRANE
           STEROID BINDING PROTEIN 2); heme binding / transition
           metal ion binding | chr3:18140654-18142338 FORWARD
          Length = 233

 Score =  129 bits (324), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 59/66 (89%), Positives = 63/66 (95%)

Query: 41  SRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFSEKYV 100
           SRMFYGPGGPYALFAGKDASRALAKMSFE++DLTGDISGLG FELEALQDWEYKF  KYV
Sbjct: 102 SRMFYGPGGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYV 161

Query: 101 KVGTVK 106
           KVGT++
Sbjct: 162 KVGTIQ 167


>AT2G24940.1 | Symbols: ATMAPR2 | ATMAPR2 (ARABIDOPSIS THALIANA
           MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 2);
           heme binding / transition metal ion binding |
           chr2:10616526-10616828 FORWARD
          Length = 100

 Score = 72.8 bits (177), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 45/68 (66%)

Query: 40  SSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFSEKY 99
           + + FYG GG Y++FAGKDASRAL KMS  E+D++  + GL   E+  L DWE KF  KY
Sbjct: 33  TGKSFYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEINTLNDWETKFEAKY 92

Query: 100 VKVGTVKS 107
             VG V S
Sbjct: 93  PVVGRVVS 100


>AT4G14965.1 | Symbols: ATMAPR4 | ATMAPR4 (ARABIDOPSIS THALIANA
           MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 4);
           heme binding / transition metal ion binding |
           chr4:8551353-8553365 FORWARD
          Length = 245

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%)

Query: 42  RMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFSEKYVK 101
           +  YG GG Y  FAG+DASRA    +F    LT  + GL   E++++ DW   +S  Y  
Sbjct: 74  KFHYGSGGGYNHFAGRDASRAFVSGNFTGDGLTDSLQGLSSSEVKSIVDWRGFYSRTYTP 133

Query: 102 VGTV 105
           VG +
Sbjct: 134 VGKL 137