Miyakogusa Predicted Gene

chr5.CM0095.210.nd

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr5.CM0095.210.nd + phase: 0 /pseudo/partial
         (470 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G31870.2 | Symbols:  | similar to hypothetical protein OsJ_02...   317   9e-87
AT1G31870.1 | Symbols:  | similar to hypothetical protein OsJ_02...   317   9e-87

>AT1G31870.2 | Symbols:  | similar to hypothetical protein
           OsJ_025196 [Oryza sativa (japonica cultivar-group)]
           (GB:EAZ41713.1); similar to Os08g0178300 [Oryza sativa
           (japonica cultivar-group)] (GB:NP_001061128.1) |
           chr1:11437249-11439801 FORWARD
          Length = 561

 Score =  317 bits (812), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 222/508 (43%), Positives = 299/508 (58%), Gaps = 57/508 (11%)

Query: 2   GSNSLKDYLKRYESNTEEEXXXXXXXXXXXXXXSQPQATGLLVVDEDPTWQKPVDLGXXX 61
           G+ SLKDYLK+YES+   E              S+P+  G+LVVDEDP WQK VD     
Sbjct: 3   GNQSLKDYLKKYESSDVVEKKKKKKKQKKP---SKPEPRGVLVVDEDPVWQKQVDPEEDE 59

Query: 62  XXXXXXXXKPVVDEDIEVKRMKRLEQSRARHHYNAISEDGSGWVSLSSESTNPCNSNNDI 121
                    P+VDEDIEVKRM+RLE+ +AR  +NAI+EDGSGWV+L     N  ++ ++I
Sbjct: 60  NEDDSAEETPLVDEDIEVKRMRRLEEIKARRAHNAIAEDGSGWVTLP---LNREDTQSNI 116

Query: 122 SPPRKRRVRNDTPSPEPELNPSTSNRKSADLSPPHRQLKRNDTPSPDHYSQPENSEGLNS 181
           SPPR++R RND+PSPEP    S ++R   D+SPP R+ KR+++PSP+   +      L+S
Sbjct: 117 SPPRRQRTRNDSPSPEPGPRRSVADRVDTDMSPPRRR-KRHNSPSPEPNRKHTKPVSLDS 175

Query: 182 DLSPPRKRRVQSVTVSEVHESMSSKSKFEDTDLSPPRLQH-----KDSGKRNYETSDLQD 236
           D+SPPRKR+ ++ + S   E+     K+   DLSPPR +H     ++S ++  ++ +L D
Sbjct: 176 DMSPPRKRKARNDSPSPEPEA-----KYLSEDLSPPRRRHVHSPSRESSRKRSDSVELDD 230

Query: 237 -LSPPRRGR--HDSPTIDNLHGSAALDLSPPRKSQKNV-----ARSSSYD---HSHLPPP 285
            LSPPRR R  H SP  D    S   DLSPPR+ + +      AR SS     ++ L PP
Sbjct: 231 DLSPPRRKRDLHGSPVSDVKKKSN--DLSPPRRRRYHSPSPEPARRSSKSFGSNADLSPP 288

Query: 286 SRSVKV----------------------DSNRSLDPDLSPPRKNSKELSIP-ASVNERKT 322
            R++ +                      + +RS + D SPPR+  ++ S P  S  +RKT
Sbjct: 289 GRNINMKDSQDSDLSPQRKAADLRRSSENVSRSSNFDSSPPRRPRRDSSPPQISKEQRKT 348

Query: 323 GLLSSKDIRNEIDKKKKDDMLRFKQMDPSISGRSAEPVYRDKVKGTRISKEEYLKSKQ-K 381
           GL+S KDI +E  KKK+D+ LRFK MD  ++G++AE V+RDK+ G RISKEEYLKSKQ K
Sbjct: 349 GLISGKDIGSEYRKKKEDEKLRFKNMDSELTGQNAEAVFRDKITGKRISKEEYLKSKQKK 408

Query: 382 VDEKAKAIEIEWGKGLAQKRXXXXXXXXXXXXXXXPFARTRDDPELGKMMKERVRSGXSH 441
           V EK K I++EWGKGLAQKR               PFARTRDDPEL +MMKERVR G   
Sbjct: 409 VIEKPKEIKLEWGKGLAQKREAEARLQELELEKDKPFARTRDDPELDQMMKERVRFGDPM 468

Query: 442 WHNLGKGKCQYQLYCVG---HIKKEGAF 466
            H + K K +  L  +G    +KK G  
Sbjct: 469 AHLVKKRKYETTLVDLGDDEEMKKSGFI 496


>AT1G31870.1 | Symbols:  | similar to hypothetical protein
           OsJ_025196 [Oryza sativa (japonica cultivar-group)]
           (GB:EAZ41713.1); similar to Os08g0178300 [Oryza sativa
           (japonica cultivar-group)] (GB:NP_001061128.1) |
           chr1:11437249-11439801 FORWARD
          Length = 561

 Score =  317 bits (812), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 222/508 (43%), Positives = 299/508 (58%), Gaps = 57/508 (11%)

Query: 2   GSNSLKDYLKRYESNTEEEXXXXXXXXXXXXXXSQPQATGLLVVDEDPTWQKPVDLGXXX 61
           G+ SLKDYLK+YES+   E              S+P+  G+LVVDEDP WQK VD     
Sbjct: 3   GNQSLKDYLKKYESSDVVEKKKKKKKQKKP---SKPEPRGVLVVDEDPVWQKQVDPEEDE 59

Query: 62  XXXXXXXXKPVVDEDIEVKRMKRLEQSRARHHYNAISEDGSGWVSLSSESTNPCNSNNDI 121
                    P+VDEDIEVKRM+RLE+ +AR  +NAI+EDGSGWV+L     N  ++ ++I
Sbjct: 60  NEDDSAEETPLVDEDIEVKRMRRLEEIKARRAHNAIAEDGSGWVTLP---LNREDTQSNI 116

Query: 122 SPPRKRRVRNDTPSPEPELNPSTSNRKSADLSPPHRQLKRNDTPSPDHYSQPENSEGLNS 181
           SPPR++R RND+PSPEP    S ++R   D+SPP R+ KR+++PSP+   +      L+S
Sbjct: 117 SPPRRQRTRNDSPSPEPGPRRSVADRVDTDMSPPRRR-KRHNSPSPEPNRKHTKPVSLDS 175

Query: 182 DLSPPRKRRVQSVTVSEVHESMSSKSKFEDTDLSPPRLQH-----KDSGKRNYETSDLQD 236
           D+SPPRKR+ ++ + S   E+     K+   DLSPPR +H     ++S ++  ++ +L D
Sbjct: 176 DMSPPRKRKARNDSPSPEPEA-----KYLSEDLSPPRRRHVHSPSRESSRKRSDSVELDD 230

Query: 237 -LSPPRRGR--HDSPTIDNLHGSAALDLSPPRKSQKNV-----ARSSSYD---HSHLPPP 285
            LSPPRR R  H SP  D    S   DLSPPR+ + +      AR SS     ++ L PP
Sbjct: 231 DLSPPRRKRDLHGSPVSDVKKKSN--DLSPPRRRRYHSPSPEPARRSSKSFGSNADLSPP 288

Query: 286 SRSVKV----------------------DSNRSLDPDLSPPRKNSKELSIP-ASVNERKT 322
            R++ +                      + +RS + D SPPR+  ++ S P  S  +RKT
Sbjct: 289 GRNINMKDSQDSDLSPQRKAADLRRSSENVSRSSNFDSSPPRRPRRDSSPPQISKEQRKT 348

Query: 323 GLLSSKDIRNEIDKKKKDDMLRFKQMDPSISGRSAEPVYRDKVKGTRISKEEYLKSKQ-K 381
           GL+S KDI +E  KKK+D+ LRFK MD  ++G++AE V+RDK+ G RISKEEYLKSKQ K
Sbjct: 349 GLISGKDIGSEYRKKKEDEKLRFKNMDSELTGQNAEAVFRDKITGKRISKEEYLKSKQKK 408

Query: 382 VDEKAKAIEIEWGKGLAQKRXXXXXXXXXXXXXXXPFARTRDDPELGKMMKERVRSGXSH 441
           V EK K I++EWGKGLAQKR               PFARTRDDPEL +MMKERVR G   
Sbjct: 409 VIEKPKEIKLEWGKGLAQKREAEARLQELELEKDKPFARTRDDPELDQMMKERVRFGDPM 468

Query: 442 WHNLGKGKCQYQLYCVG---HIKKEGAF 466
            H + K K +  L  +G    +KK G  
Sbjct: 469 AHLVKKRKYETTLVDLGDDEEMKKSGFI 496