Miyakogusa Predicted Gene
- chr4.LjT06B21.60.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr4.LjT06B21.60.nd + phase: 0
(601 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G12780.1 | Symbols: | auxilin-related | chr4:7514387-7516652... 267 1e-71
AT4G12770.1 | Symbols: | heat shock protein binding | chr4:7506... 266 3e-71
AT1G21660.1 | Symbols: | heat shock protein binding | chr1:7605... 199 4e-51
AT1G75310.1 | Symbols: AUL1 | AUL1 (auxin-like 1 protein); heat ... 187 1e-47
AT4G36520.1 | Symbols: | trichohyalin-related | chr4:17230592-1... 182 7e-46
AT1G75100.1 | Symbols: JAC1 | JAC1 (J-DOMAIN PROTEIN REQUIRED FO... 134 2e-31
AT1G30280.1 | Symbols: | heat shock protein binding | chr1:1066... 97 3e-20
>AT4G12780.1 | Symbols: | auxilin-related | chr4:7514387-7516652
FORWARD
Length = 485
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/168 (75%), Positives = 134/168 (79%)
Query: 434 NIVDDLSSIFGAAPPSSGEFQDVEGXXXXXXXXXXXXXXXXXXXXXXXLAEKNQRDLQTQ 493
NIVDDLSSIFGA+ SG FQDV+G LAEKN+RDLQ Q
Sbjct: 318 NIVDDLSSIFGASASQSGGFQDVDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQ 377
Query: 494 RDQAERNRIGETLDFEIKRWSAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVK 553
R+Q E++RIG TLD EIKRW AGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVK
Sbjct: 378 REQVEKDRIGVTLDVEIKRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVK 437
Query: 554 KAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKESWNKFNSEELF 601
K YRKATLCIHPDKVQQKGA LQQKYIAEKVFD+LKE+WNKFNSEELF
Sbjct: 438 KVYRKATLCIHPDKVQQKGANLQQKYIAEKVFDMLKEAWNKFNSEELF 485
>AT4G12770.1 | Symbols: | heat shock protein binding |
chr4:7506733-7511405 REVERSE
Length = 891
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/168 (74%), Positives = 133/168 (79%)
Query: 434 NIVDDLSSIFGAAPPSSGEFQDVEGXXXXXXXXXXXXXXXXXXXXXXXLAEKNQRDLQTQ 493
NIVDDLSSIFGA SG FQDV+G LAEKN+RDLQ Q
Sbjct: 724 NIVDDLSSIFGAPASQSGGFQDVDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQ 783
Query: 494 RDQAERNRIGETLDFEIKRWSAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVK 553
R+QAE++RIG TLD EI+RW AGKEGNLRALLSTLQYVLWPECGWQPVSLTDLIT ASVK
Sbjct: 784 REQAEKDRIGGTLDVEIRRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITGASVK 843
Query: 554 KAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKESWNKFNSEELF 601
K YRKATLCIHPDKVQQKGA LQQKYIAEKVFD+LKE+WNKFNSEELF
Sbjct: 844 KVYRKATLCIHPDKVQQKGANLQQKYIAEKVFDMLKEAWNKFNSEELF 891
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 14 QRSTSPPPYDNVGFRQANIQVDMSPKYEENLESSEDIWLTVSEIPLFTQXXXXXXXXXXX 73
Q +++PPP ++ G + ESS+D+WLTVSEIPLFTQ
Sbjct: 333 QNTSTPPPTNSDG----------------SFESSDDVWLTVSEIPLFTQPTSAPPPTRPP 376
Query: 74 XXXXVHIPKSGAGSSASTNARKQASEFSSFPSSTRFSQXXXXXXXXXXXXXXXQFDELDD 133
+ +K+ +E S P+S S Q DELDD
Sbjct: 377 P------------PRPTRPIKKKVNE-PSIPTSAYHSHVPSSGRASVNSPTASQMDELDD 423
Query: 134 FAMGRSRGNDSESGNGLPDEEVEMNS--------XXXXXXXXXXXXXXXFRYAKEVRERE 185
F++GR++ + NG PD +S FR+AKE RE+E
Sbjct: 424 FSIGRNQ----TAANGYPDPSSGEDSDVFSTAAASAAAMKDAMDKAEAKFRHAKERREKE 479
Query: 186 STKAARSKE 194
S KA+RS+E
Sbjct: 480 SLKASRSRE 488
>AT1G21660.1 | Symbols: | heat shock protein binding |
chr1:7605913-7608824 FORWARD
Length = 523
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 120/167 (71%), Gaps = 1/167 (0%)
Query: 434 NIVDDLSSIFGAAPPSSGEFQDVEGXXXXXXXXXXXXXXXXXXXXXXXLAEKNQRDLQTQ 493
N+VDD S++FG P +F+++ G +A+ N RD Q++
Sbjct: 357 NLVDDFSALFGEDPIFR-QFEEIPGESEERRKARWDREQRTKSRVAQAVADMNNRDHQSR 415
Query: 494 RDQAERNRIGETLDFEIKRWSAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVK 553
+Q +R RI ET+D EI+RW+ GKEGN+RALLS+L VLWP CGW+ VS+TDLIT+++VK
Sbjct: 416 IEQEQRTRISETVDTEIRRWATGKEGNMRALLSSLHIVLWPGCGWEAVSITDLITSSAVK 475
Query: 554 KAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKESWNKFNSEEL 600
K YRKATL +HPDKVQQKGATL+QKYIAEKVFD+LKE+WNKFN EEL
Sbjct: 476 KVYRKATLYVHPDKVQQKGATLEQKYIAEKVFDILKEAWNKFNKEEL 522
>AT1G75310.1 | Symbols: AUL1 | AUL1 (auxin-like 1 protein); heat shock
protein binding | chr1:28264665-28269785 FORWARD
Length = 1448
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 81/118 (68%), Positives = 103/118 (87%)
Query: 482 LAEKNQRDLQTQRDQAERNRIGETLDFEIKRWSAGKEGNLRALLSTLQYVLWPECGWQPV 541
LAEK RDL+TQ++Q ERNR+ E LD ++KRWS+GKE NLRAL+STLQY+L E GW+P+
Sbjct: 1330 LAEKKLRDLKTQKEQTERNRLAEALDADVKRWSSGKENNLRALISTLQYILGAESGWKPI 1389
Query: 542 SLTDLITAASVKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKESWNKFNSEE 599
LTDL+++ASV+KAYRKATL +HPDK+QQ+GA+ QQKYI EKVFDLLKE+WNKF ++E
Sbjct: 1390 PLTDLVSSASVRKAYRKATLYVHPDKLQQRGASTQQKYICEKVFDLLKEAWNKFGADE 1447
>AT4G36520.1 | Symbols: | trichohyalin-related |
chr4:17230592-17235438 REVERSE
Length = 1400
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 96/109 (88%)
Query: 490 LQTQRDQAERNRIGETLDFEIKRWSAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITA 549
L+ + A+R RI ETLD E+KRWS+GKEGN+RALLSTLQY+L PE GWQP+ LT++IT+
Sbjct: 1290 LERHQRTADRVRIAETLDTEVKRWSSGKEGNIRALLSTLQYILGPESGWQPLPLTEVITS 1349
Query: 550 ASVKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKESWNKFNSE 598
A+VK+AYRKATLC+HPDK+QQ+GA + QKYI EKVFDLLKE+WN+FNSE
Sbjct: 1350 AAVKRAYRKATLCVHPDKLQQRGANIHQKYICEKVFDLLKEAWNRFNSE 1398
>AT1G75100.1 | Symbols: JAC1 | JAC1 (J-DOMAIN PROTEIN REQUIRED FOR
CHLOROPLAST ACCUMULATION RESPONSE 1); heat shock protein
binding | chr1:28194769-28197430 REVERSE
Length = 651
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 77/92 (83%)
Query: 506 LDFEIKRWSAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVKKAYRKATLCIHP 565
+D +I++WS+GK GN+R+LLSTLQY+LW GW+PV L D+I +V+K+Y++A L +HP
Sbjct: 556 IDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRALLILHP 615
Query: 566 DKVQQKGATLQQKYIAEKVFDLLKESWNKFNS 597
DK+QQKGA+ QKY+AEKVF+LL+E+W+ FN+
Sbjct: 616 DKLQQKGASANQKYMAEKVFELLQEAWDHFNT 647
>AT1G30280.1 | Symbols: | heat shock protein binding |
chr1:10662835-10664554 REVERSE
Length = 455
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 510 IKRWSAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVKKAYRKATLCIHPDKVQ 569
I+ W GKE N+R LLSTL +VLW W + L +L + VKKAY++A LC+HPDK+Q
Sbjct: 361 IRIWLTGKETNIRLLLSTLHHVLWSNSNWDSIPLANLRDGSQVKKAYQRARLCLHPDKLQ 420
Query: 570 QKGATLQ-QKYIAEKVFDLLKESWNKFNSEE 599
Q+G T QK +A +VF +L+E+W + + E
Sbjct: 421 QRGGTSPIQKSVASRVFAILQEAWAVYVTNE 451