Miyakogusa Predicted Gene

chr4.CM0680.50.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr4.CM0680.50.nc - phase: 0 
         (1343 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18730.1 | Symbols: MGO3, BRU1, TSK | TSK (TONSOKU) | chr3:64...  1006   0.0  

>AT3G18730.1 | Symbols: MGO3, BRU1, TSK | TSK (TONSOKU) |
            chr3:6446068-6453051 REVERSE
          Length = 1311

 Score = 1006 bits (2602), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 597/1347 (44%), Positives = 811/1347 (60%), Gaps = 77/1347 (5%)

Query: 19   GNHQEEARWANVIGDIYKNRGEYTEALTWLKVDYRISLKHLTEKHLLPTCQSLGEIYLRL 78
            G+ +E+ARWAN +GDI KN GEY +AL W ++DY IS+K+L  K LLPTCQSLGEIYLRL
Sbjct: 20   GDRREQARWANNVGDILKNHGEYVDALKWFRIDYDISVKYLPGKDLLPTCQSLGEIYLRL 79

Query: 79   ERFSDALTYQKKHLDLAKEASDLVEQQRASTQLGRTYLELFTKSEYDHHSIRKAKKYFKS 138
            E F +AL YQKKHL LA+EA+D VE+QRA TQLGRTY E+F KSE D  +I+ AKKYFK 
Sbjct: 80   ENFEEALIYQKKHLQLAEEANDTVEKQRACTQLGRTYHEMFLKSEDDCEAIQSAKKYFKK 139

Query: 139  AMDLAMTLKENRPNNKS--YLKEYIDAHNNMGMLEVELENWHDAMSILVKGLKICDEEEI 196
            AM+LA  LKE  P  +S  +L+EYI+AHNN+GML+++L+N   A +IL KGL+ICDEEE+
Sbjct: 140  AMELAQILKEKPPPGESSGFLEEYINAHNNIGMLDLDLDNPEAARTILKKGLQICDEEEV 199

Query: 197  SDNDDGRSRLHHNLGRVYMELRAWDKARKHMEKDIHICNRIGHRQGEAKGYINLGEMHYR 256
             + D  RSRLHHNLG V+M LR+WD+A+KH+E DI+IC++I H QGEAKGYINL E+H +
Sbjct: 200  REYDAARSRLHHNLGNVFMALRSWDEAKKHIEMDINICHKINHVQGEAKGYINLAELHNK 259

Query: 257  IQMYEEANSYYEKALTLVRILEDEEALMEQCNENIKIVKEAVKVMKAITREEQNLKKLKR 316
             Q Y +A   Y KA +L + ++DE AL+EQ   N KIVK+++KVM+ +  EE  LKKL  
Sbjct: 260  TQKYIDALLCYGKASSLAKSMQDESALVEQIEHNTKIVKKSMKVMEELREEELMLKKLSA 319

Query: 317  DKTNARGTPDEQKFLVLQNETLDRLIEKAGMIFAWEKHCEFXXXXXXXXXXLYNEERLGD 376
            + T+A+GT +E+K ++  N  L  LI+K+ M+FAW KH ++          L ++E+L D
Sbjct: 320  EMTDAKGTSEERKSMLQVNACLGSLIDKSSMVFAWLKHLQYSKRKKKISDELCDKEKLSD 379

Query: 377  SYLNIGESYQKLRKFNKAIKWYKKSWEQFIQHANLEGQALVKINIGNILDSTQNWRGALD 436
            +++ +GESYQ LR F K++KW+ +S+E      NLEGQAL KINIGN LD    W GAL 
Sbjct: 380  AFMIVGESYQNLRNFRKSLKWFIRSYEGHEAIGNLEGQALAKINIGNGLDCIGEWTGALQ 439

Query: 437  AYQDSYRIAVEAKLPDVQINALENMHYSNMIRFDNEDETWRXXXXXXXXXXXXXXXXAKT 496
            AY++ YRIA++A LP +Q++ALE++HY +M+RF N  +                   A+ 
Sbjct: 440  AYEEGYRIALKANLPSIQLSALEDIHYIHMMRFGNAQKASELKETIQNLKESEHAEKAEC 499

Query: 497  MPEDRCSETDTEAD-HLSDGGSDDFCIPKTIS--RSKSRTTGEEFTDDVPLMSIYQSIKG 553
              +D CSETD+E   ++S+   +    P+T +  RS+     +E  DDVPL+S  Q  K 
Sbjct: 500  STQDECSETDSEGHANVSNDRPNACSSPQTPNSLRSERLADLDEANDDVPLISFLQPGKR 559

Query: 554  SSKKN--TDHMDSLTNSSKQAQLSPKSMTNLTSSHQTANNRKRVLVI-SDDEEEYLSR-- 608
              K+   +   D+ T+ +K      K  + +  S QT   RKR+ VI SDDE E      
Sbjct: 560  LFKRKQVSGKQDADTDQTK------KDFSVVADSQQTVAGRKRIRVILSDDESETEYELG 613

Query: 609  --KD--HKCLIEDFPTSDASMFSLLCSNPKIPLYQSHVLNGTCLIAVINKASPRKVQVVS 664
              KD  HK L ++   S+ SM+                         IN    R +Q   
Sbjct: 614  CPKDSSHKVLRQNEEVSEESMY---------------------FDGAINYTDNRAIQ--- 649

Query: 665  EYRSKYPINVEEXXXXXXXXXPITAAKSSRHSGSLSNDIIAEADF--PSGSKCDI-DSSG 721
                    NVEE         PI  A +  +  SLSN+I  E       GS+CD+ DS+G
Sbjct: 650  -------DNVEEGSCSYTPLHPIKVAPNVSNCRSLSNNIAVETTGRRKKGSQCDVGDSNG 702

Query: 722  KYKGVAHPLVQYPQNDLQQHITCRIGNDLIHVEAALCTADDQLNIDLLKAVVPCLYYLQL 781
                    LV +      +    +I  +  H+    C+ DD+     +K  + CLYYLQL
Sbjct: 703  TSCKTGAALVNFHAYSKTEDRKIKIEIENEHIALDSCSHDDE----SVKVELTCLYYLQL 758

Query: 782  PAEKRSEGLLPIIQHIKCAGRDLESLEPIEKLKEHLGNDTFEASIEGCVQKRLIKIYVDC 841
            P +++S+GLLPII H++  GR L+ LE    L++   N   EAS++G V KRL+K+Y+DC
Sbjct: 759  PDDEKSKGLLPIIHHLEYGGRVLKPLELYAILRDSSENVVIEASVDGWVHKRLMKLYMDC 818

Query: 842  CTELSKVPNIKVLKKLYNLEVSDDEIVVSDCDLQDLSITPLINALQSQKEFAMLDISHNL 901
            C  LS+ P++K+LKKLY  EV DD I VS+C+LQD+S  PL+ AL      AMLD+SHN+
Sbjct: 819  CQSLSEKPSMKLLKKLYISEVEDD-INVSECELQDISAAPLLCALHVHN-IAMLDLSHNM 876

Query: 902  LGNGVMEKLKKVFSALNQSYGGLTLDLHCNRFGPTALFQISECSALFTRLGVLNISGNRL 961
            LGNG MEKLK++F++ +Q YG LTLDLHCNRFGPTALFQI EC  LFTRL VLN+S NRL
Sbjct: 877  LGNGTMEKLKQLFASSSQMYGALTLDLHCNRFGPTALFQICECPVLFTRLEVLNVSRNRL 936

Query: 962  TDACRSYLLTILKSCTALYSLNVENCCITSKTIQEMADALDPESVLAHLCIGHXXXXXXX 1021
            TDAC SYL TI+K+C ALYSLNVE+C +TS+TIQ++A+ALD +S L+ LCIG+       
Sbjct: 937  TDACGSYLSTIVKNCRALYSLNVEHCSLTSRTIQKVANALDSKSGLSQLCIGYNNPVSGS 996

Query: 1022 XXXXXXXXXXTLKRFSELNMRGLKLGKPVVHSLCQXXXXXXXXXXXXXXXXXXXXXXXXX 1081
                      TL  F+EL+M G+KL   VV SL                           
Sbjct: 997  SIQNLLAKLATLSSFAELSMNGIKLSSQVVDSLYALVKTPSLSKLLVGSSGIGTDGAIKV 1056

Query: 1082 AESLVKGTEELVKLDQSYCGLTSKYI--LNTNVNFLCSIVDLNLEGNPLMREGSNTLFSL 1139
             ESL    EE VKLD S CGL S +   LN +V    SI++ N+ GNP+  EG + L  L
Sbjct: 1057 TESLCYQKEETVKLDLSCCGLASSFFIKLNQDVTLTSSILEFNVGGNPITEEGISALGEL 1116

Query: 1140 LTNTQCSLKVLVLRKCKLGCDGVLHIIEALADNSCLEELDLADNSVPNELSALQNDLSVR 1199
            L N   ++KVL+L KC L   G+L II+AL+DN  LEEL+L+DN+   + +     +  R
Sbjct: 1117 LRNPCSNIKVLILSKCHLKLAGLLCIIQALSDNKNLEELNLSDNAKIEDETVFGQPVKER 1176

Query: 1200 RCSQNQDQ-KLDNMKVDDHQEVICSLNTVCNQLEVADSEDEESPFRVEGTASGIDDSCAS 1258
                 Q+     ++   D ++ +C  N  C+ LEVADSEDE+     EGTA+    S  S
Sbjct: 1177 SVMVEQEHGTCKSVTSMDKEQELCETNMECDDLEVADSEDEQIE---EGTATS---SSLS 1230

Query: 1259 SGQRNSSSPECHFTKQLSIAIGKARSLELLDLSNNGFSAQVAEAFY--GSWKTLRPLSSQ 1316
              ++N      H  K+LS A+  A  L++LDLSNNGFS +  E  Y   S  + R   +Q
Sbjct: 1231 LPRKN------HIVKELSTALSMANQLKILDLSNNGFSVEALETLYMSWSSSSSRTGIAQ 1284

Query: 1317 KHITGKIIHLSTNERRCCGVKPCCKKD 1343
            +H+  + +H     + CCGVK CC+KD
Sbjct: 1285 RHVKEETVHFYVEGKMCCGVKSCCRKD 1311