Miyakogusa Predicted Gene
- chr4.CM0337.240.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr4.CM0337.240.nc + phase: 0
(620 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G17980.1 | Symbols: ATSLY1 | ATSLY1; protein transporter | ch... 982 0.0
AT4G31740.1 | Symbols: | similar to ATSLY1, protein transporter... 227 2e-59
AT4G36100.1 | Symbols: | similar to unknown protein [Arabidopsi... 130 2e-30
AT4G12120.1 | Symbols: ATSEC1B, SEC1B | SEC1B; protein transport... 96 8e-20
AT1G02010.1 | Symbols: SEC1A | SEC1A; protein transporter | chr1... 96 8e-20
AT1G12360.1 | Symbols: KEU | KEU (KEULE); protein transporter | ... 95 1e-19
AT1G77140.1 | Symbols: ATVPS45, VPS45 | VPS45 (VACUOLAR PROTEIN ... 87 2e-17
>AT2G17980.1 | Symbols: ATSLY1 | ATSLY1; protein transporter |
chr2:7831434-7833486 FORWARD
Length = 627
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/623 (75%), Positives = 534/623 (85%), Gaps = 6/623 (0%)
Query: 1 MSLNLRLKQTECIARMLNLNQPLNSSGTANEEAYKILIYDKFCQNILSPLIHVKDLRKHG 60
M+LNLR KQTEC+ RMLNLNQPLN SGTANEE YKILIYD+FCQNILSPL HVKDLRKHG
Sbjct: 1 MALNLRQKQTECVIRMLNLNQPLNPSGTANEEVYKILIYDRFCQNILSPLTHVKDLRKHG 60
Query: 61 VTLYFLIDKDRNPVHDVPAVYFVQPTHHNLQRIIADASRSLYHTFHLNFSTSIPRPLLED 120
VTL+FLIDKDR PVHDVPAVYFVQPT NLQRIIADASRSLY TFHLNFS+SIPR LE+
Sbjct: 61 VTLFFLIDKDRQPVHDVPAVYFVQPTESNLQRIIADASRSLYDTFHLNFSSSIPRKFLEE 120
Query: 121 LASGTLASDSIQRISRVHDQYLEFVTLEDDLFSLAHKPCFLQLNDPSAGDREIEEIVEKI 180
LASGTL S S++++S+VHDQYLEFVTLED+LFSLA + ++Q+NDPSAG++EI EI+E++
Sbjct: 121 LASGTLKSGSVEKVSKVHDQYLEFVTLEDNLFSLAQQSTYVQMNDPSAGEKEINEIIERV 180
Query: 181 VSGLFCVLATLAVVPVIRCPRGGPAEMVATALDQRIRDHLLSKNNLFTEGGNFVSSFQRP 240
SGLFCVL TL VVPVIRCP GGPAEMVA+ LDQ++RDHLLSKNNLFTEGG F+SSFQRP
Sbjct: 181 ASGLFCVLVTLGVVPVIRCPSGGPAEMVASLLDQKLRDHLLSKNNLFTEGGGFMSSFQRP 240
Query: 241 VLCIFDRNFELPVAIQHDFRYRPLVHDVLGLKLNRLSVQGEKGGMRSYELDSSDSFWLSN 300
+LCIFDRNFEL V IQHDFRYRPLVHDVLGLKLN+L VQGEKG +S+ELDSSD FW +N
Sbjct: 241 LLCIFDRNFELSVGIQHDFRYRPLVHDVLGLKLNQLKVQGEKGPPKSFELDSSDPFWSAN 300
Query: 301 GSLEFPEVAVEIETQLNKYKKDVDEVNKRTGGTHGAEFEGTDLIGN--TKHLMNAVNSLP 358
+LEFP+VAVEIETQLNKYK+DV+EVNK+TGG GAEF+GTDLIGN T+HLMN V SLP
Sbjct: 301 STLEFPDVAVEIETQLNKYKRDVEEVNKKTGGGSGAEFDGTDLIGNIHTEHLMNTVKSLP 360
Query: 359 ELTERKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMVRGGIERNELLGVLRGKGTKI 418
ELTERK+VIDKHTNIAT LLG+IKERS+D++ KKE+DMM+RGGI+R EL+ L+GKGTK+
Sbjct: 361 ELTERKKVIDKHTNIATALLGQIKERSIDAFTKKESDMMMRGGIDRTELMAALKGKGTKM 420
Query: 419 DKLRFAIMYLISSESINPSEVEAVETALRECEVDTAAFQYVKKIKX--XXXXXXXXXXXX 476
DKLRFAIMYLIS+E+IN SEVEAVE AL E E DT+AFQYVKKIK
Sbjct: 421 DKLRFAIMYLISTETINQSEVEAVEAALNEAEADTSAFQYVKKIKSLNASFAATSANSAS 480
Query: 477 XXXIVDWAEKLYGQSISAVTAGVKNLLSSDRQLALARTVEALIEGRPNPETDAYPAFDPR 536
IVDWAEKLYGQSISAVTAGVKNLLSSD+QLA+ RTVEAL EG+PNPE D+Y DPR
Sbjct: 481 RSNIVDWAEKLYGQSISAVTAGVKNLLSSDQQLAVTRTVEALTEGKPNPEIDSYRFLDPR 540
Query: 537 APKSGSGASSSHLKGPFKEAIVFMIGGGNYVEYCSLQELAQNQQPAKHIIYGTTEMLTGV 596
APKS S + SH+KGPF+EAIVFMIGGGNYVEY SLQEL Q Q K++IYG TE+L G
Sbjct: 541 APKS-SSSGGSHVKGPFREAIVFMIGGGNYVEYGSLQELTQRQLTVKNVIYGATEILNGG 599
Query: 597 DFVEQLTLLGQKMGLGN-VGSTS 618
+ VEQL LLG+KMGLG V STS
Sbjct: 600 ELVEQLGLLGKKMGLGGPVASTS 622
>AT4G31740.1 | Symbols: | similar to ATSLY1, protein transporter
[Arabidopsis thaliana] (TAIR:AT2G17980.1); similar to
unnamed protein product [Vitis vinifera]
(GB:CAO47451.1); similar to hypothetical protein [Vitis
vinifera] (GB:CAN83258.1); contains InterPro domain
Sec1-like protein; (InterPro:IPR001619) |
chr4:15363784-15364355 FORWARD
Length = 171
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/194 (62%), Positives = 141/194 (72%), Gaps = 24/194 (12%)
Query: 418 IDKLRFAIMYLISSESINPSEVEAVETALRECEVDTAAFQYVKKIKXXXXXXXXXXXXXX 477
+DKLRFAIMYL+S E+IN SEVEAVE AL D+A+
Sbjct: 1 MDKLRFAIMYLLSLETINQSEVEAVEAALPSA--DSAS---------------------R 37
Query: 478 XXIVDWAEKLYGQSISAVTAGVKNLLSSDRQLALARTVEALIEGRPNPETDAYPAFDPRA 537
IVDWAEKLYGQSISAVT GVKNLLSSD+QL +ARTVEAL +G+PNPETD+Y D RA
Sbjct: 38 SNIVDWAEKLYGQSISAVTPGVKNLLSSDQQLPVARTVEALTDGKPNPETDSYLILDARA 97
Query: 538 PKSGSGASSSHLKGPFKEAIVFMIGGGNYVEYCSLQELAQNQQPAKHIIYGTTEMLTGVD 597
KSGS +S++KGPF+EAIVFMIGGGNY+EY SLQEL+Q Q+ +IIYG TE+LTG +
Sbjct: 98 SKSGS-IDNSYVKGPFEEAIVFMIGGGNYIEYSSLQELSQRQEMVNNIIYGATEILTGTE 156
Query: 598 FVEQLTLLGQKMGL 611
VEQL LGQKMGL
Sbjct: 157 LVEQLGELGQKMGL 170
>AT4G36100.1 | Symbols: | similar to unknown protein [Arabidopsis
thaliana] (TAIR:AT2G45260.1); similar to unnamed protein
product [Vitis vinifera] (GB:CAO24521.1); contains
InterPro domain Protein of unknown function DUF641,
plant (InterPro:IPR006943); contains InterPro domain
Sec1-like protein; (InterPro:IPR001619) |
chr4:17082582-17083346 FORWARD
Length = 236
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 88/135 (65%), Gaps = 7/135 (5%)
Query: 383 ERSLDSYAKKENDMMVR-GGIERNELLGVLRGKGTKIDKLRFAIMYLISSESINPSEVEA 441
E+SLD+Y +KE +MM+ G I R ELL VL+ KGT IDKLRFAIMYLIS ES+N +EVEA
Sbjct: 107 EQSLDAYDEKEKEMMMMIGSINRTELLSVLKAKGTNIDKLRFAIMYLISLESVNQTEVEA 166
Query: 442 VETALRECEVDTAAFQYVKKIKXXXXXXXXXXXXXXXXIVDWAEKLYGQSISAVTAGVKN 501
VE ALRE ++DT+ FQYVKKIK I W G AGVKN
Sbjct: 167 VEAALREAKIDTSTFQYVKKIK-SLNVSLAANSASKSHIALWPVYKRGD-----RAGVKN 220
Query: 502 LLSSDRQLALARTVE 516
LLSSD +LA+AR VE
Sbjct: 221 LLSSDEKLAVARAVE 235
>AT4G12120.1 | Symbols: ATSEC1B, SEC1B | SEC1B; protein transporter
| chr4:7256681-7260908 REVERSE
Length = 662
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 173/399 (43%), Gaps = 39/399 (9%)
Query: 33 AYKILIYDKFCQNILSPLIHVKDLRKHGVTLYFLIDKDRNPVHDVPAVYFVQPTHHNLQR 92
+K+L+ DKF I+S + ++ + G++L +I K R P+ + +YF+QPT N+
Sbjct: 42 TWKVLVMDKFTVKIMSSACKMSEITQEGISLVEVITKHRQPMTAMEVIYFIQPTEENVTA 101
Query: 93 IIADAS--RSLYHTFHLNFSTSIPRPLLEDLASGTLASDSIQRISRVHDQYLEFVTLEDD 150
++D + LY + FS+ + R L+ + A ++RI + + LE+++++
Sbjct: 102 FLSDMTGKSPLYKKAFVFFSSPVSRSLVNLIKKDMRA---MKRIGGLKEMNLEYISMDIQ 158
Query: 151 LFSLAHKPCFLQLNDPSAGDREIEEIVEKIVSGLFCVLATLAVVPVIRCPRGGPA----- 205
F ++ +L + + + + + VLA+L P +R RG A
Sbjct: 159 GFVTNNENALEELFCDDENHQRADACLNVVAKRIATVLASLKEYPFVRY-RGAKALDATT 217
Query: 206 -----EMVATALDQRIRDHLLSKNNLFTEGGNFVSSFQRPVLC---IFDRNFELPVAIQH 257
E++ T L + N + F + C I DR+ + + H
Sbjct: 218 MTTYRELIPTKLAASVW-------NCLARYKQTIEDFPQTETCELLILDRSIDQIAPLIH 270
Query: 258 DFRYRPLVHDVLGLKLNRL-----SVQGEKGGMRSYELDSSDSFWLSNGSLEFPEVAVEI 312
++ Y + HD+L ++ N+ S G+K + LD DS W+ + + +
Sbjct: 271 EWTYDAMCHDLLNMEGNKYTHEVPSKTGDKPEKKEVLLDEEDSIWVELRDAHIADASERL 330
Query: 313 ETQLNKYKKDVDEVNKRTGGTHGAEFEGTDLIGNTKHLMNAVNSLPELTERKQVIDKHTN 372
++ + NK H ++ G DL ++K L V++LP+ +E+ + H
Sbjct: 331 HEKMTNFVSK----NKAAQLKHSSKDFG-DL--SSKDLQKMVHALPQYSEQIDKLSLHVE 383
Query: 373 IATVLLGEIKERSLDSYAKKENDMMVRGGIERNELLGVL 411
IA + I E+ L + E D +V G R +++ L
Sbjct: 384 IARTINRTIMEQGLRDLGQLEQD-LVFGDAGRKDVIKFL 421
>AT1G02010.1 | Symbols: SEC1A | SEC1A; protein transporter |
chr1:348046-352197 FORWARD
Length = 673
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 191/428 (44%), Gaps = 31/428 (7%)
Query: 13 IARMLNLNQPLNSSGTANEEAYKILIYDKFCQNILSPLIHVKDLRKHGVTLYFLIDKDRN 72
I+R L++ L S+ T + +A+KILI D+ ++S + D+ G++L + K R
Sbjct: 24 ISRDRLLHEMLGSTKTGDSKAWKILIMDRVTVKVMSQSCKMADITDQGISLVEELFKRRE 83
Query: 73 PVHDVPAVYFVQPTHHNLQRIIADAS--RSLYHTFHLNFSTSIPRPLLEDLASGTLASDS 130
P+ + A+YF+QP+ N+ ++D S LY + FS++IP+ L+ + S S
Sbjct: 84 PMPGMDAIYFIQPSKENIVMFLSDMSGREPLYRKAFIFFSSTIPKELVNHIKSD---SSV 140
Query: 131 IQRISRVHDQYLEFVTLEDDLFSLAHKPCFLQLNDPSA-GDREIEEIVEKIVSGLFCVLA 189
+ RI + + +E+ +++ F H+ L A R + + + + V A
Sbjct: 141 LPRIGALREMNMEYFPIDNQGFLTDHEQALETLYAEDAENSRHFHICLNIMATRIATVFA 200
Query: 190 TLAVVPVIR---CPRGGPAEMVATALDQRIRDHLLSKNNLFTEGGNFVSSFQRPVLCIFD 246
+L +P +R ++V + L I D +SK + NF + + L I D
Sbjct: 201 SLKELPFVRYRAAKSTASRDLVPSKLAAAIWD-CISK---YKAIPNFPQT-ETCELLIVD 255
Query: 247 RNFELPVAIQHDFRYRPLVHDVLGLKLNR--LSVQGEKGG---MRSYELDSSDSFWLSNG 301
R+ + I H++ Y + HD+L ++ N+ + V + GG + L+ D WL
Sbjct: 256 RSVDQIAPIIHEWTYDAMCHDLLDMEGNKHVIEVPSKTGGPPEKKEIVLEDHDPVWLELR 315
Query: 302 SLEFPEVAVEIETQLNKYKKDVDEVNKRTGGTHGAEFEGTDLIGNTKHLMNAVNSLPELT 361
+ + + ++ + R+ +G++L +T+ L V +LP+
Sbjct: 316 HTHIADASERLHEKMTNFASKNKAAQMRSR-------DGSEL--STRDLQKIVQALPQYG 366
Query: 362 ERKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMVRGGIERNELLGVLRGK--GTKID 419
E+ + H +A + I++ L + E D +V G +++ LR +
Sbjct: 367 EQVDKLSTHVELAGKINRIIRDTGLRDLGQLEQD-LVFGDAGAKDVINFLRTNQDTNPEN 425
Query: 420 KLRFAIMY 427
KLR ++Y
Sbjct: 426 KLRLLMIY 433
>AT1G12360.1 | Symbols: KEU | KEU (KEULE); protein transporter |
chr1:4201170-4206142 FORWARD
Length = 666
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 177/403 (43%), Gaps = 34/403 (8%)
Query: 13 IARMLNLNQPLNSSGTANEEA-YKILIYDKFCQNILSPLIHVKDLRKHGVTLYFLIDKDR 71
I R L + L S+ T + ++ +K+LI DK I+S + D+ + GV+L I + R
Sbjct: 21 ITRERLLYEMLRSAKTGSSKSTWKVLIMDKLTVKIMSYACKMADITQEGVSLVEDIFRRR 80
Query: 72 NPVHDVPAVYFVQPTHHNLQRIIADAS--RSLYHTFHLNFSTSIPRPLLEDLASGTLASD 129
P+ + A+YF+QPT N+ ++D S LY + FS+ + + L+ G + D
Sbjct: 81 QPLPSMDAIYFIQPTKENVIMFLSDMSGKSPLYKKAFVFFSSPVSKELV-----GHIKKD 135
Query: 130 S--IQRISRVHDQYLEFVTLEDDLFSLAHKPCFLQLNDPSAGDREIEEIVEKIVSGLFCV 187
S + RI + + LEF ++ F H+ L R+ + + + S + V
Sbjct: 136 SSVLPRIGALREMNLEFFAIDSQGFITDHERALEDLFGDEETSRKGDACLNVMASRIATV 195
Query: 188 LATLAVVPVIRCPRGGPAEMVATALDQRIRDHLLSK-----NNLFTEGGNFVSSFQRPVL 242
A+L P +R A+ + + +RD + +K N + + +F +
Sbjct: 196 FASLREFPAVRY---RAAKSLDASTMTTLRDLIPTKLAAGIWNCLAKHKQSIENFPQTET 252
Query: 243 C---IFDRNFELPVAIQHDFRYRPLVHDVLGLKLNRL-----SVQGEKGGMRSYELDSSD 294
C I DR+ + + H++ Y + HD+L ++ N+ S G + + L+ D
Sbjct: 253 CELLILDRSIDQIAPVIHEWTYDAMCHDLLNMEGNKYVHVIPSKSGGQPEKKDVLLEEHD 312
Query: 295 SFWLSNGSLEFPEVAVEIETQLNKYKKDVDEVNKRTGGTHGAEFEGTDLIGNTKHLMNAV 354
WL + + + ++ + ++K + +G +L +T+ L V
Sbjct: 313 PIWLELRHAHIADASERLHDKMTNF------LSKNKAAQLQGKRDGAEL--STRDLQKMV 364
Query: 355 NSLPELTERKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMM 397
+LP+ +E+ + H IA L I+E+ L + E D++
Sbjct: 365 QALPQYSEQIDKLSLHVEIARKLNDLIREQGLRELGQLEQDLV 407
>AT1G77140.1 | Symbols: ATVPS45, VPS45 | VPS45 (VACUOLAR PROTEIN
SORTING 45); protein transporter |
chr1:28989057-28992575 FORWARD
Length = 569
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 127/587 (21%), Positives = 257/587 (43%), Gaps = 72/587 (12%)
Query: 35 KILIYDKFCQNILSPLIHVKDLRKHGVTLYFLIDK---DRNPVHDVPAVYFVQPTHHNLQ 91
K+LI D + +S + +L + V L +ID + + + AVYF++PT N+Q
Sbjct: 22 KVLILDSETVSNVSIVYSQSELLQKEVFLVEMIDSISVSKESMSHLKAVYFIRPTSDNIQ 81
Query: 92 RIIADASRSLYHTFHLNFSTSIPRPLLEDLASGTLA-SDSIQRISRVHDQYLEFVTLEDD 150
++ + + +HL FS LL+D LA SD + + +V + Y +FV+ +
Sbjct: 82 KLRYQLANPRFGEYHLFFSN-----LLKDTQIHILADSDEQEVVQQVQEYYADFVSGDPY 136
Query: 151 LFSL----AHKPCFLQLNDPSAGDREIEEIVEKIVSGLFCVLATLAVVPVIRCPR-GGPA 205
F+L H + DPS ++ +++V G+ V L PVIR R A
Sbjct: 137 HFTLNMASNHLYMIPAVVDPSG----LQRFSDRVVDGIAAVFLALKRRPVIRYQRTSDTA 192
Query: 206 EMVATALDQRIRDHLLSKNNLFTEGGNFVSSFQRPVLCIFDRNFELPVAIQHDFRYRPLV 265
+ +A + + H ++ LF +F + P+L + DR + + + + Y+ +V
Sbjct: 193 KRIAHETAKLMYQH---ESALF----DFRRTESSPLLLVIDRRDDPVTPLLNQWTYQAMV 245
Query: 266 HDVLGLKLNRLSVQGEKGGMRSYELD-----SSDSFWLSNGSLEFPEVAVEIETQLNKYK 320
H+++GL+ N++ ++ + +++ D+F+ SN F ++ + I+ ++ ++
Sbjct: 246 HELIGLQDNKVDLKSIGSLPKDQQVEVVLSSEQDAFFKSNMYENFGDIGMNIKRMVDDFQ 305
Query: 321 KDVDEVNKRTGGTHGAEFEGTDLIGNTKHLMNAVNSLPELTERKQVIDKHTNIATVLLGE 380
+ V + N+ I + + V++ PE + + + KH + T +
Sbjct: 306 Q-VAKSNQN--------------IQTVEDMARFVDNYPEYKKMQGNVSKHVTLVTEMSKL 350
Query: 381 IKERSLDSYAKKENDMMVRG--GIERNELLGVLRGKG-TKIDKLRFAIMYLISSESINPS 437
++ R L + ++ E D+ G G + +L + + ID+LR ++Y + E NP
Sbjct: 351 VEARKLMTVSQTEQDLACNGGQGAAYEAVTDLLNNESVSDIDRLRLVMLYALRYEKENPV 410
Query: 438 EVEAV--ETALRECEVDTAAFQYVKKIKXXXXXXXXXXXXXXXXIVDWAEKLYGQSISAV 495
++ + + A R + Q++ +K +++ A ++++
Sbjct: 411 QLMQLFNKLASRSPKYKPGLVQFL--LKQAGVEKRTGDLFGNRDLLNIA-----RNMARG 463
Query: 496 TAGVKNLLSSDRQLALARTVEALIEGRPNPETDAYPAFDPRAPKSGSGASSSHLKGPFKE 555
GV+N+ + + L L +T+E++ GR D P G +G +E
Sbjct: 464 LKGVENVYTQHQPL-LFQTMESITRGRLR---------DVDYPFVGDHFQ----QGRPQE 509
Query: 556 AIVFMIGGGNYVEYCSLQELAQNQQPAKHIIYGTTEMLTGVDFVEQL 602
++FM+GG Y E S+ L I G T +L F++ L
Sbjct: 510 VVIFMVGGTTYEESRSV-ALQNATNSGVRFILGGTAVLNSKRFLKDL 555