Miyakogusa Predicted Gene
- chr4.CM0333.110.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr4.CM0333.110.nd + phase: 0 /partial
(372 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G21800.2 | Symbols: QQT2 | QQT2 (QUATRE-QUART2); ATP binding ... 533 e-152
AT4G21800.1 | Symbols: QQT2 | QQT2 (QUATRE-QUART2); ATP binding ... 533 e-152
AT4G12790.4 | Symbols: | ATP-binding family protein | chr4:7517... 92 6e-19
AT4G12790.3 | Symbols: | ATP-binding family protein | chr4:7517... 92 6e-19
AT4G12790.2 | Symbols: | ATP-binding family protein | chr4:7517... 92 6e-19
AT4G12790.1 | Symbols: | ATP-binding family protein | chr4:7517... 92 6e-19
AT5G22370.2 | Symbols: EMB1705, QQT1 | EMB1705/QQT1 (QUATRE-QUAR... 79 5e-15
AT5G22370.1 | Symbols: EMB1705, QQT1 | EMB1705/QQT1 (QUATRE-QUAR... 79 5e-15
>AT4G21800.2 | Symbols: QQT2 | QQT2 (QUATRE-QUART2); ATP binding |
chr4:11573301-11574988 FORWARD
Length = 379
Score = 533 bits (1373), Expect = e-152, Method: Compositional matrix adjust.
Identities = 250/325 (76%), Positives = 287/325 (88%), Gaps = 3/325 (0%)
Query: 4 KEKEELTETMNKLHIEGSSSGSGLPNFKRKPVIILVVGMAGSGKTTFMHRLVCHTHLSTL 63
+E ++L ++++KL + +SS S NFK+KP+II+VVGMAGSGKT+F+HRLVCHT S
Sbjct: 14 EESQKLVDSLDKLRVSAASSSS---NFKKKPIIIIVVGMAGSGKTSFLHRLVCHTFDSKS 70
Query: 64 RGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVVSV 123
GYVVNLDPAVM+LP+ ANIDIRDTVKYKEVMKQ+NLGPNGGILTSLNLFATKFDEVVSV
Sbjct: 71 HGYVVNLDPAVMSLPFGANIDIRDTVKYKEVMKQYNLGPNGGILTSLNLFATKFDEVVSV 130
Query: 124 IERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSQNPTTFMS 183
IE+RADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRS +P TFMS
Sbjct: 131 IEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSSSPITFMS 190
Query: 184 NMLYACSILYKTRLPLILAFNKVDVAQHQFAVEWMEDFEVFQQAAGSDHSYSSTFAQSLS 243
NMLYACSILYKTRLPL+LAFNK DVA H+FA+EWMEDFEVFQ A SD+SY++T A SLS
Sbjct: 191 NMLYACSILYKTRLPLVLAFNKTDVADHKFALEWMEDFEVFQAAIQSDNSYTATLANSLS 250
Query: 244 LALDEFYKNLRSVGVSAVSGTGIEAFFKTVETSAEEYMENYKADLDKRREEKQRLEEGRR 303
L+L EFY+N+RSVGVSA+SG G++ FFK +E SAEEYME YKADLD R+ +K+RLEE R+
Sbjct: 251 LSLYEFYRNIRSVGVSAISGAGMDGFFKAIEASAEEYMETYKADLDMRKADKERLEEERK 310
Query: 304 KESMDKLRMDMEKSGGGTVVLNTGL 328
K M+KLR DME S GGTVVLNTGL
Sbjct: 311 KHEMEKLRKDMESSQGGTVVLNTGL 335
>AT4G21800.1 | Symbols: QQT2 | QQT2 (QUATRE-QUART2); ATP binding |
chr4:11573301-11574988 FORWARD
Length = 379
Score = 533 bits (1373), Expect = e-152, Method: Compositional matrix adjust.
Identities = 250/325 (76%), Positives = 287/325 (88%), Gaps = 3/325 (0%)
Query: 4 KEKEELTETMNKLHIEGSSSGSGLPNFKRKPVIILVVGMAGSGKTTFMHRLVCHTHLSTL 63
+E ++L ++++KL + +SS S NFK+KP+II+VVGMAGSGKT+F+HRLVCHT S
Sbjct: 14 EESQKLVDSLDKLRVSAASSSS---NFKKKPIIIIVVGMAGSGKTSFLHRLVCHTFDSKS 70
Query: 64 RGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVVSV 123
GYVVNLDPAVM+LP+ ANIDIRDTVKYKEVMKQ+NLGPNGGILTSLNLFATKFDEVVSV
Sbjct: 71 HGYVVNLDPAVMSLPFGANIDIRDTVKYKEVMKQYNLGPNGGILTSLNLFATKFDEVVSV 130
Query: 124 IERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSQNPTTFMS 183
IE+RADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRS +P TFMS
Sbjct: 131 IEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSSSPITFMS 190
Query: 184 NMLYACSILYKTRLPLILAFNKVDVAQHQFAVEWMEDFEVFQQAAGSDHSYSSTFAQSLS 243
NMLYACSILYKTRLPL+LAFNK DVA H+FA+EWMEDFEVFQ A SD+SY++T A SLS
Sbjct: 191 NMLYACSILYKTRLPLVLAFNKTDVADHKFALEWMEDFEVFQAAIQSDNSYTATLANSLS 250
Query: 244 LALDEFYKNLRSVGVSAVSGTGIEAFFKTVETSAEEYMENYKADLDKRREEKQRLEEGRR 303
L+L EFY+N+RSVGVSA+SG G++ FFK +E SAEEYME YKADLD R+ +K+RLEE R+
Sbjct: 251 LSLYEFYRNIRSVGVSAISGAGMDGFFKAIEASAEEYMETYKADLDMRKADKERLEEERK 310
Query: 304 KESMDKLRMDMEKSGGGTVVLNTGL 328
K M+KLR DME S GGTVVLNTGL
Sbjct: 311 KHEMEKLRKDMESSQGGTVVLNTGL 335
>AT4G12790.4 | Symbols: | ATP-binding family protein |
chr4:7517277-7518889 REVERSE
Length = 271
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 38 LVVGMAGSGKTTFMHRLVCHTHLSTLRGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQ 97
LV+G AGSGK+T+ L H +VVNLDPA Y +DIR+ + ++VM+
Sbjct: 6 LVIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRELISLEDVMED 65
Query: 98 FNLGPNGGILTSLNLFATKF-DEVVSVIERRADQLDYVLVDTPGQIEIFTWSASGAIITE 156
LGPNG ++ + D V +E D DY++ D PGQIE+FT E
Sbjct: 66 LKLGPNGALMYCMEYLEDSLHDWVDEELENYRDD-DYLIFDCPGQIELFTHVPVLKNFVE 124
Query: 157 AFAS-TFPTVVTYVVDTPRSQNPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHQFAV 215
F V Y++D+ + T F+S + + + + + LP + +K+D+ Q + +
Sbjct: 125 HLKQKNFNVCVVYLLDSQFITDVTKFISGCMSSLAAMIQLELPHVNILSKMDLLQDKSNI 184
Query: 216 E 216
+
Sbjct: 185 D 185
>AT4G12790.3 | Symbols: | ATP-binding family protein |
chr4:7517277-7518889 REVERSE
Length = 271
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 38 LVVGMAGSGKTTFMHRLVCHTHLSTLRGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQ 97
LV+G AGSGK+T+ L H +VVNLDPA Y +DIR+ + ++VM+
Sbjct: 6 LVIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRELISLEDVMED 65
Query: 98 FNLGPNGGILTSLNLFATKF-DEVVSVIERRADQLDYVLVDTPGQIEIFTWSASGAIITE 156
LGPNG ++ + D V +E D DY++ D PGQIE+FT E
Sbjct: 66 LKLGPNGALMYCMEYLEDSLHDWVDEELENYRDD-DYLIFDCPGQIELFTHVPVLKNFVE 124
Query: 157 AFAS-TFPTVVTYVVDTPRSQNPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHQFAV 215
F V Y++D+ + T F+S + + + + + LP + +K+D+ Q + +
Sbjct: 125 HLKQKNFNVCVVYLLDSQFITDVTKFISGCMSSLAAMIQLELPHVNILSKMDLLQDKSNI 184
Query: 216 E 216
+
Sbjct: 185 D 185
>AT4G12790.2 | Symbols: | ATP-binding family protein |
chr4:7517277-7518889 REVERSE
Length = 271
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 38 LVVGMAGSGKTTFMHRLVCHTHLSTLRGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQ 97
LV+G AGSGK+T+ L H +VVNLDPA Y +DIR+ + ++VM+
Sbjct: 6 LVIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRELISLEDVMED 65
Query: 98 FNLGPNGGILTSLNLFATKF-DEVVSVIERRADQLDYVLVDTPGQIEIFTWSASGAIITE 156
LGPNG ++ + D V +E D DY++ D PGQIE+FT E
Sbjct: 66 LKLGPNGALMYCMEYLEDSLHDWVDEELENYRDD-DYLIFDCPGQIELFTHVPVLKNFVE 124
Query: 157 AFAS-TFPTVVTYVVDTPRSQNPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHQFAV 215
F V Y++D+ + T F+S + + + + + LP + +K+D+ Q + +
Sbjct: 125 HLKQKNFNVCVVYLLDSQFITDVTKFISGCMSSLAAMIQLELPHVNILSKMDLLQDKSNI 184
Query: 216 E 216
+
Sbjct: 185 D 185
>AT4G12790.1 | Symbols: | ATP-binding family protein |
chr4:7517277-7518889 REVERSE
Length = 271
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 38 LVVGMAGSGKTTFMHRLVCHTHLSTLRGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQ 97
LV+G AGSGK+T+ L H +VVNLDPA Y +DIR+ + ++VM+
Sbjct: 6 LVIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRELISLEDVMED 65
Query: 98 FNLGPNGGILTSLNLFATKF-DEVVSVIERRADQLDYVLVDTPGQIEIFTWSASGAIITE 156
LGPNG ++ + D V +E D DY++ D PGQIE+FT E
Sbjct: 66 LKLGPNGALMYCMEYLEDSLHDWVDEELENYRDD-DYLIFDCPGQIELFTHVPVLKNFVE 124
Query: 157 AFAS-TFPTVVTYVVDTPRSQNPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHQFAV 215
F V Y++D+ + T F+S + + + + + LP + +K+D+ Q + +
Sbjct: 125 HLKQKNFNVCVVYLLDSQFITDVTKFISGCMSSLAAMIQLELPHVNILSKMDLLQDKSNI 184
Query: 216 E 216
+
Sbjct: 185 D 185
>AT5G22370.2 | Symbols: EMB1705, QQT1 | EMB1705/QQT1 (QUATRE-QUART1)
| chr5:7406590-7408512 FORWARD
Length = 298
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
Query: 38 LVVGMAGSGKTTFMHRLVCHTHLSTLRGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQ 97
+V+G GSGKTT+ + + L + +VNLDPA LPY ++I + +K ++VM +
Sbjct: 6 VVIGPPGSGKTTYCNGMSQFLSLMGRKVAIVNLDPANDALPYECGVNIEELIKLEDVMSE 65
Query: 98 FNLGPNGGILTSLNLFATKFDEVVSVIERRADQLDYVLVDTPGQIEI-FTWSASGAIITE 156
+LGPNGG++ + D + S ++ Y+L D PGQ+E+ F ++ ++T+
Sbjct: 66 HSLGPNGGLVYCMEYLEKNIDWLESKLKPLLKD-HYILFDFPGQVELFFIHDSTKNVLTK 124
Query: 157 AFAS-TFPTVVTYVVDTPRSQNPTTFMSNMLYACSILYKTRLPLILAFNKVDV 208
S ++D+ +P ++S++L + S + LP + +K+D+
Sbjct: 125 LIKSLNLRLTAVQLIDSHLCCDPGNYVSSLLLSLSTMLHMELPHVNVLSKIDL 177
>AT5G22370.1 | Symbols: EMB1705, QQT1 | EMB1705/QQT1
(QUATRE-QUART1); ATP binding | chr5:7406590-7408512
FORWARD
Length = 298
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
Query: 38 LVVGMAGSGKTTFMHRLVCHTHLSTLRGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQ 97
+V+G GSGKTT+ + + L + +VNLDPA LPY ++I + +K ++VM +
Sbjct: 6 VVIGPPGSGKTTYCNGMSQFLSLMGRKVAIVNLDPANDALPYECGVNIEELIKLEDVMSE 65
Query: 98 FNLGPNGGILTSLNLFATKFDEVVSVIERRADQLDYVLVDTPGQIEI-FTWSASGAIITE 156
+LGPNGG++ + D + S ++ Y+L D PGQ+E+ F ++ ++T+
Sbjct: 66 HSLGPNGGLVYCMEYLEKNIDWLESKLKPLLKD-HYILFDFPGQVELFFIHDSTKNVLTK 124
Query: 157 AFAS-TFPTVVTYVVDTPRSQNPTTFMSNMLYACSILYKTRLPLILAFNKVDV 208
S ++D+ +P ++S++L + S + LP + +K+D+
Sbjct: 125 LIKSLNLRLTAVQLIDSHLCCDPGNYVSSLLLSLSTMLHMELPHVNVLSKIDL 177