Miyakogusa Predicted Gene
- chr3.LjT34H24.100.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr3.LjT34H24.100.nd - phase: 1 /partial
(322 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G80210.1 | Symbols: | similar to mov34 family protein [Arabi... 299 1e-81
AT3G06820.2 | Symbols: | mov34 family protein | chr3:2151033-21... 291 4e-79
AT3G06820.1 | Symbols: | mov34 family protein | chr3:2151033-21... 290 8e-79
AT1G80210.2 | Symbols: | similar to mov34 family protein [Arabi... 280 6e-76
>AT1G80210.1 | Symbols: | similar to mov34 family protein
[Arabidopsis thaliana] (TAIR:AT3G06820.2); similar to
Os05g0542600 [Oryza sativa (japonica cultivar-group)]
(GB:NP_001056196.1); similar to unnamed protein product
[Vitis vinifera] (GB:CAO46054.1); contains InterPro
domain Mov34/MPN/PAD-1 (InterPro:IPR000555) |
chr1:30168249-30170520 REVERSE
Length = 406
Score = 299 bits (766), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/290 (52%), Positives = 194/290 (66%), Gaps = 6/290 (2%)
Query: 1 VRTQGMYQLLDSGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNRXX 60
VRTQ MYQLLDSGFIGLIFSC+SEDANKVGRIQVIAFQSSDGK N + + + L N+
Sbjct: 111 VRTQAMYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDS 170
Query: 61 XXXXXXXXXXXXXXXXXXGYFKAESPDQDTXXXXXXXXXXXXXXXXXLGNFFAN-ADASY 119
+ ++P+ DT FF N +A+
Sbjct: 171 VIDLESSFSSSDSIYQRSSSARGDNPELDTSDTATTSGSKGGGRVSDFEAFFVNNTEANN 230
Query: 120 LGGEKGGGNYLLNNSDSKEIDIDPMDMSESMQEAMHRSNLDMSGAEYVRREIPLYVLPSL 179
+ GNY S I+ID MDMSESMQEAMHRSNL+ SG YVR+E+PL+VLP+
Sbjct: 231 TRRDGTSGNY-----SSTAIEIDSMDMSESMQEAMHRSNLETSGVGYVRKEVPLHVLPTS 285
Query: 180 SLINLDSPLASYMDLQHVIFEEERTAYNQAISQNMRDEKVHPLTFIHHTSTYQASLCKLI 239
SL+ L+SPLAS+ LQ V++EEER AY+Q++ Q+ RD +VHPL FIH+TSTYQAS+CKLI
Sbjct: 286 SLLQLNSPLASFKSLQRVLYEEERAAYHQSVQQSKRDGRVHPLAFIHNTSTYQASMCKLI 345
Query: 240 EYCLSPAITALQDRLRENEVRLAIMSEEAKSLEAEAYRGSEASLSSPRRV 289
EYCLSPAI ALQDRL+EN++RLA++ +EA+ LEA+ +G+E S + R V
Sbjct: 346 EYCLSPAINALQDRLKENKIRLAMLMDEAEVLEAQKLKGAETSGGASRLV 395
>AT3G06820.2 | Symbols: | mov34 family protein |
chr3:2151033-2153270 REVERSE
Length = 405
Score = 291 bits (744), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 156/294 (53%), Positives = 191/294 (64%), Gaps = 9/294 (3%)
Query: 1 VRTQGMYQLLDSGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNRXX 60
VRTQ MYQLLDSGFIGLIFSC+SEDANKVGRIQVIAFQSSDGK N + + + L N+
Sbjct: 111 VRTQAMYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDS 170
Query: 61 XXXXXXXXXXXXXXXXXXGYFKAESPDQDTXXXXXXXXXXXXXXXXXLGNFFANADASYL 120
K P+ DT G FF N + +
Sbjct: 171 VIDIESSSSSSDSIYQRSSSSK---PELDTIDTATTSGSKGGGRVSDFGPFFTNNIEANI 227
Query: 121 GGEKGGGNYLLNNSDSKEIDIDPMDMSESMQEAMHRSNLDMSGAEYVRREIPLYVLPSLS 180
G + N S I ID MDMSESMQEAM RSNLD SGA YVR+E+PL+VLP+ S
Sbjct: 228 TGRDE--THKSGNLSSTTIGIDSMDMSESMQEAMLRSNLDTSGAGYVRKEVPLHVLPTSS 285
Query: 181 LINLDSPLASYMDLQHVIFEEERTAYNQAISQNMRDEKVHPLTFIHHTSTYQASLCKLIE 240
L+ ++SPLAS+ LQ V++EEER AY Q++ QNMRD +VHPL FIH+TSTYQAS+CKLIE
Sbjct: 286 LLPVNSPLASFKSLQRVLYEEERAAYYQSVQQNMRDGRVHPLAFIHNTSTYQASMCKLIE 345
Query: 241 YCLSPAITALQDRLRENEVRLAIMSEEAKSLEAEAYRGSEASLSSPRRVASPVH 294
YCLSPAI ALQDR +EN++RLA++ +EA+ LEA+ +G+E S RR + VH
Sbjct: 346 YCLSPAINALQDRQKENKIRLAMLMDEAEVLEAQKLKGAETS----RRPSHLVH 395
>AT3G06820.1 | Symbols: | mov34 family protein |
chr3:2151033-2152665 REVERSE
Length = 324
Score = 290 bits (742), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 156/294 (53%), Positives = 191/294 (64%), Gaps = 9/294 (3%)
Query: 1 VRTQGMYQLLDSGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNRXX 60
VRTQ MYQLLDSGFIGLIFSC+SEDANKVGRIQVIAFQSSDGK N + + + L N+
Sbjct: 30 VRTQAMYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDS 89
Query: 61 XXXXXXXXXXXXXXXXXXGYFKAESPDQDTXXXXXXXXXXXXXXXXXLGNFFANADASYL 120
K P+ DT G FF N + +
Sbjct: 90 VIDIESSSSSSDSIYQRSSSSK---PELDTIDTATTSGSKGGGRVSDFGPFFTNNIEANI 146
Query: 121 GGEKGGGNYLLNNSDSKEIDIDPMDMSESMQEAMHRSNLDMSGAEYVRREIPLYVLPSLS 180
G + N S I ID MDMSESMQEAM RSNLD SGA YVR+E+PL+VLP+ S
Sbjct: 147 TGRDE--THKSGNLSSTTIGIDSMDMSESMQEAMLRSNLDTSGAGYVRKEVPLHVLPTSS 204
Query: 181 LINLDSPLASYMDLQHVIFEEERTAYNQAISQNMRDEKVHPLTFIHHTSTYQASLCKLIE 240
L+ ++SPLAS+ LQ V++EEER AY Q++ QNMRD +VHPL FIH+TSTYQAS+CKLIE
Sbjct: 205 LLPVNSPLASFKSLQRVLYEEERAAYYQSVQQNMRDGRVHPLAFIHNTSTYQASMCKLIE 264
Query: 241 YCLSPAITALQDRLRENEVRLAIMSEEAKSLEAEAYRGSEASLSSPRRVASPVH 294
YCLSPAI ALQDR +EN++RLA++ +EA+ LEA+ +G+E S RR + VH
Sbjct: 265 YCLSPAINALQDRQKENKIRLAMLMDEAEVLEAQKLKGAETS----RRPSHLVH 314
>AT1G80210.2 | Symbols: | similar to mov34 family protein
[Arabidopsis thaliana] (TAIR:AT3G06820.2); similar to
Os05g0542600 [Oryza sativa (japonica cultivar-group)]
(GB:NP_001056196.1); similar to unknown protein [Oryza
sativa (japonica cultivar-group)] (GB:AAU43989.1);
contains InterPro domain Mov34/MPN/PAD-1
(InterPro:IPR000555) | chr1:30168438-30170520 REVERSE
Length = 371
Score = 280 bits (717), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/266 (53%), Positives = 177/266 (66%), Gaps = 6/266 (2%)
Query: 1 VRTQGMYQLLDSGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNRXX 60
VRTQ MYQLLDSGFIGLIFSC+SEDANKVGRIQVIAFQSSDGK N + + + L N+
Sbjct: 111 VRTQAMYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDS 170
Query: 61 XXXXXXXXXXXXXXXXXXGYFKAESPDQDTXXXXXXXXXXXXXXXXXLGNFFAN-ADASY 119
+ ++P+ DT FF N +A+
Sbjct: 171 VIDLESSFSSSDSIYQRSSSARGDNPELDTSDTATTSGSKGGGRVSDFEAFFVNNTEANN 230
Query: 120 LGGEKGGGNYLLNNSDSKEIDIDPMDMSESMQEAMHRSNLDMSGAEYVRREIPLYVLPSL 179
+ GNY S I+ID MDMSESMQEAMHRSNL+ SG YVR+E+PL+VLP+
Sbjct: 231 TRRDGTSGNY-----SSTAIEIDSMDMSESMQEAMHRSNLETSGVGYVRKEVPLHVLPTS 285
Query: 180 SLINLDSPLASYMDLQHVIFEEERTAYNQAISQNMRDEKVHPLTFIHHTSTYQASLCKLI 239
SL+ L+SPLAS+ LQ V++EEER AY+Q++ Q+ RD +VHPL FIH+TSTYQAS+CKLI
Sbjct: 286 SLLQLNSPLASFKSLQRVLYEEERAAYHQSVQQSKRDGRVHPLAFIHNTSTYQASMCKLI 345
Query: 240 EYCLSPAITALQDRLRENEVRLAIMS 265
EYCLSPAI ALQDRL+EN++R+ + S
Sbjct: 346 EYCLSPAINALQDRLKENKIRVCVSS 371